Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30811
(431 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11250.1 68416.m01368 60S acidic ribosomal protein P0 (RPP0C)... 134 2e-32
At3g09200.1 68416.m01094 60S acidic ribosomal protein P0 (RPP0B)... 134 2e-32
At2g40010.1 68415.m04916 60S acidic ribosomal protein P0 (RPP0A) 130 5e-31
At1g51860.1 68414.m05846 leucine-rich repeat protein kinase, put... 29 1.0
At1g33410.1 68414.m04136 expressed protein 29 1.0
At5g13260.1 68418.m01523 expressed protein 28 2.4
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 28 3.1
At3g56700.1 68416.m06307 male sterility protein, putative simila... 27 4.1
At5g13510.1 68418.m01560 ribosomal protein L10 family protein ri... 27 5.5
At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family... 27 5.5
At2g29000.1 68415.m03527 leucine-rich repeat family protein / pr... 27 5.5
At1g07200.1 68414.m00766 ATP-dependent Clp protease ClpB protein... 27 5.5
At5g59650.1 68418.m07479 leucine-rich repeat protein kinase, put... 27 7.2
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 26 9.6
At3g21340.1 68416.m02695 leucine-rich repeat protein kinase, put... 26 9.6
At3g08670.1 68416.m01007 expressed protein 26 9.6
At2g38160.1 68415.m04684 expressed protein 26 9.6
At2g29650.2 68415.m03604 inorganic phosphate transporter, putati... 26 9.6
At2g29650.1 68415.m03603 inorganic phosphate transporter, putati... 26 9.6
At2g28960.1 68415.m03523 leucine-rich repeat protein kinase, put... 26 9.6
>At3g11250.1 68416.m01368 60S acidic ribosomal protein P0 (RPP0C)
similar to 60S acidic ribosomal protein P0 GI:2088654
[Arabidopsis thaliana]
Length = 323
Score = 134 bits (324), Expect = 2e-32
Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 225
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 226 MRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAP 399
M+++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 400 LSVVIPAHNT 429
+ VV+ NT
Sbjct: 121 IDVVVQPGNT 130
>At3g09200.1 68416.m01094 60S acidic ribosomal protein P0 (RPP0B)
similar to putative 60S acidic ribosomal protein P0
GB:P50346 [Glycine max]
Length = 320
Score = 134 bits (324), Expect = 2e-32
Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 225
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 226 MRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAP 399
M+++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 400 LSVVIPAHNT 429
+ VV+ NT
Sbjct: 121 IDVVVQPGNT 130
>At2g40010.1 68415.m04916 60S acidic ribosomal protein P0 (RPP0A)
Length = 317
Score = 130 bits (313), Expect = 5e-31
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
Frame = +1
Query: 61 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 240
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 241 KDHLD--NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 414
+ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 415 PAHNT 429
NT
Sbjct: 127 QPGNT 131
>At1g51860.1 68414.m05846 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 890
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 256 NNPALEKLL--PHIKGNVGFVFTRGDLVEVRDKLL 354
N P ++K PHI VGF+ T+GD+ + D L
Sbjct: 781 NQPVIDKTRERPHINDWVGFMLTKGDIKSIVDPKL 815
>At1g33410.1 68414.m04136 expressed protein
Length = 1459
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 RNRCSRSVSRYVAPVSCSW--EKTL*CAKPSKTTWTTIQPSRNCC 283
RN S +V R + V S EKT C++ + W +Q R CC
Sbjct: 823 RNGQSDAVERILVVVEASLRGEKTFGCSQDTSGDWCLLQHLRGCC 867
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 28.3 bits (60), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 205 ARYWSHVARYGSAASVASPRYRH 137
ARYW +RYG + +A+ +Y +
Sbjct: 330 ARYWGLASRYGICSDIATSKYEY 352
>At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 666
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1
Query: 407 TDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLP 294
T+NGA G A S SLS S SP VN + LP
Sbjct: 205 TENGAWNEGLAQYDASSSLSLSMPSQNSPNVNNQSGLP 242
>At3g56700.1 68416.m06307 male sterility protein, putative similar
to SP|Q08891 Male sterility protein 2 {Arabidopsis
thaliana}; contains Pfam profile PF03015: Male sterility
protein
Length = 527
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 266 PSRNCCHTSRATLASCSPAETSLRSVTN 349
P R HT+R SC ETS +VT+
Sbjct: 33 PRRRLSHTTRRVQTSCFYGETSFEAVTS 60
>At5g13510.1 68418.m01560 ribosomal protein L10 family protein
ribosomal protein L10- Nicotiana tabacum, EMBL:AB010879
Length = 220
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 157 QQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 327
+Q Q +R +L ++ +++ KNT++ KAI+ E L P +KG ++F + D
Sbjct: 76 KQFQDLRRTLPDTTKLIVAKNTLVFKAIE-----GTKWEALKPCMKGMNAWLFVQTD 127
>At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 418
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 318 GEHEANVALDVWQQFLEGWIVVQVVFDGFA 229
G HEA+ L W+ + GW + F GFA
Sbjct: 83 GNHEASNYL--WELYYGGWAATNIYFLGFA 110
>At2g29000.1 68415.m03527 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 872
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 250 LDNNPALEKLL--PHIKGNVGFVFTRGDLVEVRDKLLENK 363
+ N P ++++ PHI VG + T+GD+ + D L +
Sbjct: 761 ITNQPVIQQVREKPHIAEWVGLMLTKGDIKSIMDPKLNGE 800
>At1g07200.1 68414.m00766 ATP-dependent Clp protease ClpB
protein-related similar to ATP-dependent Clp protease,
ATP-binding subunit ClpB (GI:24982014) [Pseudomonas
putida KT2440]; similar to ClpB protein
(SP:Q9RA63){Thermus thermophilus}
Length = 422
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = -3
Query: 423 VGGNDD*QWGNGTGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQ 277
+G + + +G+ T + +LQ + +S+GE E +D W Q
Sbjct: 329 IGSHFERCFGSETHLELDKEVILQILAASWSSLSSGEEEGRTIVDQWMQ 377
>At5g59650.1 68418.m07479 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 892
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 250 LDNNPALE--KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 372
+ N P ++ + HI VGF TRGD+ ++ D L ++
Sbjct: 783 ITNQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYES 825
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 247 HLDNNPALEKLLPHIKGNVG 306
HLDNN +LEK +PH+ G
Sbjct: 635 HLDNN-SLEKAIPHLNSRDG 653
>At3g21340.1 68416.m02695 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 880
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 223 MMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLL 354
++ + I + L N + EK PHI VG + T+GD+ + D L
Sbjct: 764 VLLEIITNQLVINQSREK--PHIAEWVGLMLTKGDIQNIMDPKL 805
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 407 TDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLM 288
T ++ GRA + SLSR S+ PRV P P++
Sbjct: 285 TSGPTISGGRAASNGRTGPSLSRPSSPGPRVRNTPQQPIV 324
>At2g38160.1 68415.m04684 expressed protein
Length = 299
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 257 TIQPSRNCCHTSRATLASC----SPAETSLRSVTNCWRTKSRLQLVP 385
+I+PSR TSRATL S S +++ S+T ++ +R P
Sbjct: 142 SIKPSRQATPTSRATLPSTRLTNSAQKSNSESITTSIKSNTRASAFP 188
>At2g29650.2 68415.m03604 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 398
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 345 VTDLNEVSAGEHEANVALDVWQQFLEGWIVVQVVFDGF 232
V+ N+V + +++ L W++F + W++V + F F
Sbjct: 77 VSGNNDV-VSDSPSSIVLPWWEEFPKRWVIVLLCFSAF 113
>At2g29650.1 68415.m03603 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 512
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 345 VTDLNEVSAGEHEANVALDVWQQFLEGWIVVQVVFDGF 232
V+ N+V + +++ L W++F + W++V + F F
Sbjct: 77 VSGNNDV-VSDSPSSIVLPWWEEFPKRWVIVLLCFSAF 113
>At2g28960.1 68415.m03523 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 880
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 283 PHIKGNVGFVFTRGDLVEVRDKLL 354
PHI VG++ T+GD+ V D L
Sbjct: 782 PHIAAWVGYMLTKGDIENVVDPRL 805
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,993,849
Number of Sequences: 28952
Number of extensions: 232474
Number of successful extensions: 755
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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