Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30810
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358156-1|AAQ88523.1|  576|Homo sapiens AQGV3103 protein.             49   2e-05
AB073610-1|BAD38647.1|  576|Homo sapiens peptidoglycan recogniti...    49   2e-05
AK055882-1|BAB71034.1|  634|Homo sapiens protein ( Homo sapiens ...    48   3e-05
AF384856-1|AAL05629.1|  576|Homo sapiens peptidoglycan recogniti...    48   3e-05
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F...    32   1.6  

>AY358156-1|AAQ88523.1|  576|Homo sapiens AQGV3103 protein.
          Length = 576

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
 Frame = +1

Query: 49  VTSLYPATLSGDLAEAILIQGTERGSSSISIGTAGNWNSTQAPRHFMIHSRVNIEMTDPE 228
           V SL   TL+G+L    L +G++  S    +GT G W+   APR F +       +T   
Sbjct: 215 VDSLLAVTLAGNLGLTFL-RGSQTQSHP-DLGTEGCWDQLSAPRTFTLLDPKASLLTKAF 272

Query: 229 IRGGIDGFVLGSAITSVLGTFSSLRLSQLLDMYYS---PRNGIFSQAFRACNRRELSQTH 399
           + G +DG +LG  ++       S  LS LL  YY     R+  F   FR  N   L+   
Sbjct: 273 LNGALDGVILGDYLSRTPEPRPS--LSHLLSQYYGAGVARDPGFRSNFRRQNGAALTSAS 330

Query: 400 ITNQNLAGETFAFAAALDTNMPLRGTIMGGLEQLVNSAVTNF 525
           I  Q + G           ++ L+      L Q+  +A   F
Sbjct: 331 ILAQQVWGTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEF 372


>AB073610-1|BAD38647.1|  576|Homo sapiens peptidoglycan recognition
           protein L precursor protein.
          Length = 576

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
 Frame = +1

Query: 49  VTSLYPATLSGDLAEAILIQGTERGSSSISIGTAGNWNSTQAPRHFMIHSRVNIEMTDPE 228
           V SL   TL+G+L    L +G++  S    +GT G W+   APR F +       +T   
Sbjct: 215 VDSLLAVTLAGNLGLTFL-RGSQTQSHP-DLGTEGCWDQLSAPRTFTLLDPKASLLTKAF 272

Query: 229 IRGGIDGFVLGSAITSVLGTFSSLRLSQLLDMYYS---PRNGIFSQAFRACNRRELSQTH 399
           + G +DG +LG  ++       S  LS LL  YY     R+  F   FR  N   L+   
Sbjct: 273 LNGALDGVILGDYLSRTPEPRPS--LSHLLSQYYGAGVARDPGFRSNFRRQNGAALTSAS 330

Query: 400 ITNQNLAGETFAFAAALDTNMPLRGTIMGGLEQLVNSAVTNF 525
           I  Q + G           ++ L+      L Q+  +A   F
Sbjct: 331 ILAQQVWGTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEF 372


>AK055882-1|BAB71034.1|  634|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31320 fis, clone LIVER1000542, moderately
           similar to Mus musculus TAGL-alpha mRNA. ).
          Length = 634

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
 Frame = +1

Query: 49  VTSLYPATLSGDLAEAILIQGTERGSSSISIGTAGNWNSTQAPRHFMIHSRVNIEMTDPE 228
           V SL   TL+G+L    L +G++  S    +GT G W+   APR F +       +T   
Sbjct: 215 VDSLLAVTLAGNLGLTFL-RGSQTQSHP-DLGTEGCWDQLSAPRTFTLLDPKASLLTMAF 272

Query: 229 IRGGIDGFVLGSAITSVLGTFSSLRLSQLLDMYYS---PRNGIFSQAFRACNRRELSQTH 399
           + G +DG +LG  ++       S  LS LL  YY     R+  F   FR  N   L+   
Sbjct: 273 LNGALDGVILGDYLSRTPEPRPS--LSHLLSQYYGAGVARDPGFRSNFRRQNGAALTSAS 330

Query: 400 ITNQNLAGETFAFAAALDTNMPLRGTIMGGLEQLVNSAVTNF 525
           I  Q + G           ++ L+      L Q+  +A   F
Sbjct: 331 ILAQQVWGTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEF 372


>AF384856-1|AAL05629.1|  576|Homo sapiens peptidoglycan recognition
           protein L precursor protein.
          Length = 576

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
 Frame = +1

Query: 49  VTSLYPATLSGDLAEAILIQGTERGSSSISIGTAGNWNSTQAPRHFMIHSRVNIEMTDPE 228
           V SL   TL+G+L    L +G++  S    +GT G W+   APR F +       +T   
Sbjct: 215 VDSLLAVTLAGNLGLTFL-RGSQTQSHP-DLGTEGCWDQLSAPRTFTLLDPKASLLTMAF 272

Query: 229 IRGGIDGFVLGSAITSVLGTFSSLRLSQLLDMYYS---PRNGIFSQAFRACNRRELSQTH 399
           + G +DG +LG  ++       S  LS LL  YY     R+  F   FR  N   L+   
Sbjct: 273 LNGALDGVILGDYLSRTPEPRPS--LSHLLSQYYGAGVARDPGFRSNFRRQNGAALTSAS 330

Query: 400 ITNQNLAGETFAFAAALDTNMPLRGTIMGGLEQLVNSAVTNF 525
           I  Q + G           ++ L+      L Q+  +A   F
Sbjct: 331 ILAQQVWGTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEF 372


>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
           protein protein.
          Length = 4590

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
 Frame = +1

Query: 433 AFAAALDTNMPLRGTIMGGLEQLVNSAVTNFQTYSTSNLNDL-------SCVTSIATSLD 591
           A+ AA D N+P+  TIM       +     + TYS +NLN +       +   S + +LD
Sbjct: 467 AYKAAFDENVPIGTTIMSLSAVDPDEGENGYVTYSIANLNHVPFAIDHFTGAVSTSENLD 526

Query: 592 YRLKTNLYI--VLDSSW--PYQ 645
           Y L   +Y   +  S W  PY+
Sbjct: 527 YELMPRVYTLRIRASDWGLPYR 548


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.130    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,705,649
Number of Sequences: 237096
Number of extensions: 1637530
Number of successful extensions: 6829
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6829
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)