Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30809
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.63 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = -1

Query: 422 LFIRYHKINKRETCLHVCEKEY*NVLFFCTKGIMVYS*DKSISPCFISINVSIHR 258
           +FI +  +   E   H+  ++Y N+L+FC   IMVY  + +I+P   ++  S  R
Sbjct: 308 VFILWIILVPEEQVYHLEIEKYYNILYFCR--IMVYL-NSAINPILYNLMSSKFR 359


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 604 TYYLYEYVCVQYSYRFRYECDAQHYLRKYQT 512
           TY +++Y  V    RF       HYLR + T
Sbjct: 501 TYLMFDYCTVLRVQRFNNYQSLAHYLRVFFT 531


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 595 LYEYVCVQYSYRFRYECDAQHYLRKY 518
           +Y Y C   SY  +Y    + +LR+Y
Sbjct: 284 VYRYSCRDCSYATKYCHSLKIHLRRY 309


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 595 LYEYVCVQYSYRFRYECDAQHYLRKY 518
           +Y Y C   SY  +Y    + +LR+Y
Sbjct: 42  VYRYSCRDCSYATKYCHSLKIHLRRY 67


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 316 YTIIPFVQKNNTFQYSFSQT 375
           Y + PF+ + +  +Y+F +T
Sbjct: 360 YPLAPFLNRKSDVKYTFEET 379


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 95  FNVSGIPLDESLNIYCMHYFCVLIR 21
           F V+G   D   +I  + YFC++ R
Sbjct: 366 FPVAGFISDFDCDINSIQYFCLMAR 390


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 296 SPCFISINVSIHRRVVFIMGLN 231
           SP FI I V++     F++GLN
Sbjct: 499 SPIFIIIPVTLTSVCYFMIGLN 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,695
Number of Sequences: 336
Number of extensions: 3866
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)