Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30809
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   1.4  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.6  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 509 FGLVFSEIVLCVAFVAKPIT---VLYTYILV*IIGFLVALAMKLHYRSFVT*FMLSW 670
           F L+ SEI+   + +A P+    +L+T ILV +   +  + + +HYR   T  M  W
Sbjct: 297 FFLLISEIIPSTS-LALPLLGKYLLFTMILVGLSVVITIIILNIHYRKPSTHKMAPW 352


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 90  RFWNSIR*IIEHLLHALFLCINPRIWHWFN 1
           RF+N I   I HL      C NP ++ W N
Sbjct: 356 RFYNLIF-FIAHLTAMSSTCYNPFLYAWLN 384


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 491 VCKLFREMHGCTAFCKAVFQ 432
           +C+++  +  C AFC AV Q
Sbjct: 901 ICRIYVNLCECDAFCLAVSQ 920


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,758
Number of Sequences: 2352
Number of extensions: 15354
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)