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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30809
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    25   0.73 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   2.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   3.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   3.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.9  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.9  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   3.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   5.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   6.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   6.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   9.0  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 509 FGLVFSEIVLCVAFVAKPIT---VLYTYILV*IIGFLVALAMKLHYRSFVT*FMLSW 670
           F L+ SEI+   + +A P+    +L+T ILV +   +  + + +HYR   T  M  W
Sbjct: 280 FFLLISEIIPSTS-LALPLLGKYLLFTMILVGLSVVITIVILNVHYRKPSTHKMAPW 335


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 595 LYEYVCVQYSYRFRYECDAQHYLRKY 518
           +Y+Y C   +Y  +Y    + +LRKY
Sbjct: 42  VYQYRCANCTYATKYCHSLKLHLRKY 67


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -2

Query: 583 VCVQYSYRFRYECDAQHYLRKYQTKRWSFTPFASYSEKCMAAQHSAKLYF 434
           VCV  S R  YEC    Y   +  + +S  P  S      A   SA  +F
Sbjct: 106 VCVAISSRMEYECSRIDY---FPNEEYSPDPSDSTMAIPYAVTKSAMFFF 152


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 509 FGLVFSEIV----LCVAFVAKPITVLYTYILV*IIGFLVALAMKLHYRSFVT*FMLSW 670
           F L+ +EI+    L +  + K +  L+T ILV +  ++    + +H+RS  T  M  W
Sbjct: 294 FFLLLAEIIPPTSLAIPLLGKYL--LFTMILVTLSIWITVCVLNVHFRSPSTHNMSPW 349


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 78  NSRNVKGIYFNNNVDIN*HCISYNAN 155
           N+ N K  Y NNN + N   + YN N
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 78  NSRNVKGIYFNNNVDIN*HCISYNAN 155
           N+ N K  Y NNN + N   + YN N
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 78  NSRNVKGIYFNNNVDIN*HCISYNAN 155
           N+ N K  Y NNN + N   + YN N
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 78  NSRNVKGIYFNNNVDIN*HCISYNAN 155
           N+ N K  Y NNN + N   + YN N
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNIN 117


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 78  NSRNVKGIYFNNNVDIN*HCISYNAN 155
           N+ N K  Y NNN + N +  +YN N
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNNYNNN 350


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +1

Query: 334 VQKNNTFQYSFSQTCK 381
           +  NN ++Y+++  CK
Sbjct: 90  IHNNNNYKYNYNNNCK 105


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 509 FGLVFSEIVLCVAFVAKPIT--VLYTYILV*IIGFLVALAMKLHYRSFVT*FMLSW 670
           F L+ +EI+   + V   +   VL+T IL      +  + + +H+RS  T  M  W
Sbjct: 285 FFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHVMAPW 340


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 125 NIYIVIEINTFNVSGIPLDESLNIYCMHY 39
           N Y  +  N  N+  IP+   + IYC ++
Sbjct: 347 NNYKKLYYNIINIEQIPVPVPVPIYCGNF 375


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 509 FGLVFSEIV----LCVAFVAKPITVLYTYILV*IIGFLVALAMKLHYRSFVT*FMLSW 670
           F L+ +EI+    L V  + K +  L+T +LV +   +    + +++RS VT  M  W
Sbjct: 281 FFLLLAEIIPPTSLTVPLLGKYL--LFTMVLVTLSVVVTIAVLNVNFRSPVTHRMARW 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,103
Number of Sequences: 438
Number of extensions: 4370
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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