Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30808
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    27   0.16 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   6.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.9  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
 Frame = -1

Query: 470 KLVEFDFQMRNPEIQNNHKMLRWRAGVQLYD*YL---SHLLQE--VEENQ 336
           KL+EFD +++N  +  N++  R R+ + L+  Y+   S+LL +  V+ NQ
Sbjct: 108 KLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQ 157


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 520 TLEGHLQDLKGFSKPKIKFEQYETPAHIAAIALYT 624
           T   HL+D   + KP++      T +   A A YT
Sbjct: 177 TAAPHLRDSPNYIKPQLHVSTGSTSSPTIASATYT 211


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 246 PCFKSICFFNCRSSNIFLFVNSL 178
           P FK+  FF+   S +F  +NSL
Sbjct: 216 PEFKAARFFSIDRSTLFSVLNSL 238


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 725 TQHLATLHPYSDFQGHNPA 669
           T H A  HPY +F G  PA
Sbjct: 170 THHYARYHPYPNF-GVPPA 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,557
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)