Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30808
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 27 0.24
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 27 0.24
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 3.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 3.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.2
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 26.6 bits (56), Expect = 0.24
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 412 ILWLFCISGFLIWKSNSTSFTSF*EQVIMTALM-KLKTLEGHLQDLKGFSKPKI 570
I+ FCI + W FTS ++T L+ + TL G ++ LK + P +
Sbjct: 218 IMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNL 271
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 26.6 bits (56), Expect = 0.24
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 412 ILWLFCISGFLIWKSNSTSFTSF*EQVIMTALM-KLKTLEGHLQDLKGFSKPKI 570
I+ FCI + W FTS ++T L+ + TL G ++ LK + P +
Sbjct: 271 IMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNL 324
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 229 LFLQLQIL*YLPICQLSLSIRLRKRHLMFLNNYL-EKACNV 110
+F+ LQ L I ++++++H +F+NN L AC++
Sbjct: 250 VFIGLQSLSLTNIQLEHFEMKIKRKHNVFVNNILAASACSL 290
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 740 QQMSRTQHLATLHPYSDFQGHNPAS 666
QQ+ TQ L QGHNP+S
Sbjct: 188 QQLQITQSQYLLQQGLGLQGHNPSS 212
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 373 IYHIC-FRKLRKTSCCRNWWDGTHRKLTDRIWLTQGC 266
IY++ FR L K + NWWD +++I ++GC
Sbjct: 387 IYNMVRFRNLVKGTKIDNWWDNG----SNQIAFSRGC 419
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 346 RKTSCCRNW 320
RK +CCR+W
Sbjct: 396 RKKNCCRSW 404
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 346 RKTSCCRNW 320
RK +CCR+W
Sbjct: 396 RKKNCCRSW 404
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 497 IITCSQNEVKLVEFDFQMRNPEIQNNHKMLRWRAGVQ 387
II +N+V L D + + NN++ W A V+
Sbjct: 362 IIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVK 398
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 497 IITCSQNEVKLVEFDFQMRNPEIQNNHKMLRWRAGVQ 387
II +N+V L D + + NN++ W A V+
Sbjct: 400 IIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVK 436
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 9.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 523 LEGHLQDLKGFSKPKIKFEQYETPAHIAAIALYTIQTQFGDLEDKLILDAGL 678
++ L DLKG + ++ + HI L T Q G L+ +L +G+
Sbjct: 305 VQAELMDLKGDLEGLVEGVIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGI 356
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 256 SVNSSPESAKSCQSTSYV 309
S N+SP A+ C ST+ +
Sbjct: 740 SPNASPSPAEQCASTTTI 757
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,210
Number of Sequences: 438
Number of extensions: 4216
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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