Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30802
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 50 3e-08
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.7
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 6.3
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 8.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 8.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 49.6 bits (113), Expect = 3e-08
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +2
Query: 218 IVDLSENSFTNVT--LMADLS-IEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAA 388
+++LS N T++ + DL ++IL+L ID IE+ +F L + L+LS NKL
Sbjct: 339 VLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRT- 397
Query: 389 KLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTID 568
+ F G L + L L+ N + S++ F + L+ELD+SGN LT++
Sbjct: 398 -VGAQLFNG---------LFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVP 447
Query: 569 HVTLIAISSLPMLKVL 616
A+ L +LK L
Sbjct: 448 D----ALRDLALLKTL 459
Score = 47.6 bits (108), Expect = 1e-07
Identities = 39/142 (27%), Positives = 67/142 (47%)
Frame = +2
Query: 227 LSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHA 406
L + T + + + +LNLS + I+ FK+L +++LDL N + ++ +A
Sbjct: 321 LGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSID--RIESNA 378
Query: 407 FEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIA 586
F PL + L L+ N L ++ LF L L L +SGN + +ID +A
Sbjct: 379 F---------LPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDP---LA 426
Query: 587 ISSLPMLKVLRMRSCQLTEIPE 652
+ LK L + +LT +P+
Sbjct: 427 FRNCSDLKELDLSGNELTSVPD 448
Score = 45.2 bits (102), Expect = 6e-07
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Frame = +2
Query: 215 KIVDLSENSFTNV---TLMADL-SIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLT 382
+I+DLS N T + + + DL ++ L+L R I I + L +R + SYN L
Sbjct: 215 RILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSLD 274
Query: 383 AAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTT 562
+ EG + + +R ++LAYN L L + +F L QL L+++GN L +
Sbjct: 275 SLP------EGLFASTR-----DLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGS 323
Query: 563 IDHVTLIAISSLPMLKVLRMRSCQLTEIPEKFLHTPLYL 679
D V L L VL + LT I + +L
Sbjct: 324 -DRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFL 361
Score = 41.1 bits (92), Expect = 1e-05
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +2
Query: 215 KIVDLSENSFTNVT-LMADLSI-EILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAA 388
K +DLS N T+V + DL++ + L+L +I N SF+ L ++ L L N +
Sbjct: 434 KELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDI--- 490
Query: 389 KLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTID 568
G + L +++LNLA N + + + FE +LE + + GN L+ I+
Sbjct: 491 --------GNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDIN 542
Query: 569 HVTLIAISSLPMLKV 613
V +I+SL +L +
Sbjct: 543 GV-FTSIASLLLLNL 556
Score = 36.7 bits (81), Expect = 2e-04
Identities = 26/95 (27%), Positives = 50/95 (52%)
Frame = +2
Query: 329 FKELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLF 508
F L+++ VL+L+ N+L + ++ F G L + VLNL+YN L ++ +F
Sbjct: 305 FTRLEQLLVLNLAGNRLGSDRVDETTFLG---------LIRLIVLNLSYNMLTHIDARMF 355
Query: 509 EHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKV 613
+ L L+ LD+ N + I+ + + +L L++
Sbjct: 356 KDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLEL 390
Score = 28.3 bits (60), Expect = 0.072
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Frame = +2
Query: 344 EMRVLDLSYNKLTAAKLSPHAFEGKYTPEQY--------------EPLAAMRVLNLAYND 481
++R+LDLS N++T + + + + E + L +R N +YN
Sbjct: 213 DIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNS 272
Query: 482 LHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKV 613
L SL + LF L E+ ++ N L + + L +L +
Sbjct: 273 LDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNL 316
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 505 VRTLTAVGGAGYQWESPDHDRSRYFDCDFEFADAQGVENAFLPIDRDP*KVPPHS 669
+++ VG P +D R + E + + + ++RDP PP S
Sbjct: 386 IQSTDFVGDCSSLLNLPGNDARRRVEAALEAVEEERQREYGIRVERDPILTPPSS 440
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 15 SSSLDLIVKTLQHLEPAPTLLQDHL 89
S+ + LIV H+E P LL HL
Sbjct: 320 SAEIRLIVTAPLHVEVTPPLLSVHL 344
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 15 SSSLDLIVKTLQHLEPAPTLLQDHL 89
S+ + LIV H+E P LL HL
Sbjct: 320 SAEIRLIVTAPLHVEVTPPLLSVHL 344
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 539 ISGNPLTTIDHVTLIAISSLPMLKVLR 619
ISG P+ DH L L M++ ++
Sbjct: 327 ISGAPIERPDHAVLCVYMGLSMVEAIK 353
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.8 bits (44), Expect = 6.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 489 ECRSLYARFRTRIAARGSYCSGVYLPS 409
ECR L ARF T + GS G+ + S
Sbjct: 173 ECRELTARFTTDVI--GSCAFGIDMSS 197
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 190 PFFFTEERVQILIVAINF 137
PFF+ +E + +V +NF
Sbjct: 380 PFFYVQEDDDVKLVLLNF 397
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -1
Query: 646 DLGQLARTHSQHLEHRQTRNRNQSNVIYRGQGIPTDIQL 530
DLG + ++ H++ + N I +G G ++QL
Sbjct: 338 DLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDSVNVQL 376
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -1
Query: 646 DLGQLARTHSQHLEHRQTRNRNQSNVIYRGQGIPTDIQL 530
DLG + ++ H++ + N I +G G ++QL
Sbjct: 338 DLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDSVNVQL 376
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,123
Number of Sequences: 438
Number of extensions: 3488
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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