Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30799
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 53 2e-07
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 53 2e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 47 1e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 7e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 7e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 42 5e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 42 5e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 40 0.001
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.001
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 40 0.001
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 40 0.001
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 39 0.003
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 37 0.014
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 36 0.025
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 36 0.025
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.033
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.033
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.033
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.033
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.033
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 35 0.044
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.058
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 35 0.058
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 35 0.058
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 35 0.058
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 35 0.058
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 35 0.058
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.13
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.18
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.18
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.18
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.18
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.23
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 32 0.31
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 32 0.31
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 31 0.54
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.54
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.54
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 0.71
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.6
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.6
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.6
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.6
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC025726-4|AAK73922.1| 198|Caenorhabditis elegans Prion-like-(q... 29 3.8
Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 27 8.8
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 27 8.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 8.8
AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical... 27 8.8
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +1
Query: 280 VIHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLI 459
+I NRIFVGGF +TT+ +L + F F V +++ G SK YGF+TF + A+ I
Sbjct: 63 LIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 122
Query: 460 VKQSGGVMFSPLGRLRVAQAVRK 528
K + + +L + A+RK
Sbjct: 123 RKLTPKQLEFRSRKLNLGPAIRK 145
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +1
Query: 280 VIHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLI 459
+I NRIFVGGF +TT+ +L + F F V +++ G SK YGF+TF + A+ I
Sbjct: 64 LIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 123
Query: 460 VKQSGGVMFSPLGRLRVAQAVRK 528
K + + +L + A+RK
Sbjct: 124 RKLTPKQLEFRSRKLNLGPAIRK 146
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGV-SKCYGFVTFASPRVA 450
++F+GG S T+T ED+ ++F T+ V A +++D+A + +GFVTF S VA
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGV-SKCYGFVTFASPRVA 450
++F+GG S T+T ED+ ++F T+ V A +++D+A + +GFVTF S VA
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQSG 474
++V D+ L FS+F T+T+A+V+ D G SK +GFV F P A V
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 475 GVMFSPLGRLRVAQAVRKQ 531
M L VA A RK+
Sbjct: 405 SKMIG-AKPLYVALAQRKE 422
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQSG 474
++V D+ L FS+F T+T+A+V+ D G SK +GFV F P A V
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 475 GVMFSPLGRLRVAQAVRKQ 531
M L VA A RK+
Sbjct: 405 SKMIG-AKPLYVALAQRKE 422
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFAS 438
++F+GG S TTDE L +FS + V A VI D S+ +GFVTFAS
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 99
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFAS 438
++F+GG S TTDE L +FS + V A VI D S+ +GFVTFAS
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 119
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFAS 438
++F+GG S TTDE L +FS + V A VI D S+ +GFVTFAS
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 120
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTFASPRVAKLIVKQS 471
++VG TT+E+L FFS+ + R++ DR G + + F+ FA A+ V+Q
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 472 GGVMFS 489
G F+
Sbjct: 67 NGAEFN 72
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTFASPRVAKLIVKQS 471
++VG TT++DL +FS V+ R++ DR G + + FV F A+ V Q
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 472 GGVMFSPLG-RLRVAQ 516
GV F+ R+ +AQ
Sbjct: 66 NGVDFNGRALRVNLAQ 81
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTFASPRVAKLIVKQS 471
++VG T+E++ +F+ V R++YDR G + + FV F+ A+ V+Q
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 472 GGVMFSPLGR-LRVAQA 519
GV F+ GR LRV A
Sbjct: 68 NGVAFN--GRNLRVNYA 82
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKL 456
+IFVGG S +EDL F+ + V A+V YDR G S+ + FV F + KL
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKL 456
+IFVGG S +EDL F+ + V A+V YDR G S+ + FV F + KL
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFASPRVAKLIVKQ 468
+IFVGG + TTD+ + +F+S F +T V+ D S+ +GFVTF+ +KQ
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTF 432
R++V G T++ L ++F+ + TVT + +I D+A + +GFVTF
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTFASPRVAKLIVKQ 468
+IFVGG T+D+ L ++F F + A VI DR S+ YGFVT A+ K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 469 SGGVMFSPLGRLRVAQAVRKQISQLPVLGTEAAPLQ 576
++ + +A K + + + A +Q
Sbjct: 96 PNPIIDGRKANVNLAYLGAKPRTNVQLAALAAGQVQ 131
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFASPRVAKLIVKQ 468
+IFVGG + TTD+ + +F+S F +T V+ D S+ +GFVTF+ +KQ
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTF 432
R++V G T++ L ++F+ + TVT + +I D+A + +GFVTF
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFASPRVAKLIVKQ 468
+IFVGG + TTD+ + +F+S F +T V+ D S+ +GFVTF+ +KQ
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTF 432
R++V G T++ L ++F+ + TVT + +I D+A + +GFVTF
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTFASPRVAKLIVKQS 471
+FVG S +++ + FS V + ++++DR G K YGF+ F + A++ ++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 472 GGVMFSPLGR-LRVAQA 519
G S GR LRV A
Sbjct: 80 NGYELS--GRILRVDSA 94
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 268 KFGTVIH-NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPR 444
KF T + +++FV TD++L FS F TVT+ R + + G K FV F +
Sbjct: 675 KFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEA 734
Query: 445 VAKLIVKQSGGVM 483
A+ V +M
Sbjct: 735 SAQKCVASGDKLM 747
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQS 471
++F+G S +E+L + F+ F + V+ D+ G S+ FVTF + A + K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 472 GGVMFSPLGRLRVAQAVRKQIS 537
LG + QAV +S
Sbjct: 203 HHSQTMELGGGQNYQAVASLLS 224
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTF 432
R++V G T++ L ++F+ + TVT + +I D+A + +GFVTF
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTF 432
R++V G T++ L ++F+ + TVT + +I D+A + +GFVTF
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGGVMFSPLGRL 504
D +L + F+ F + +A+V DRA SKC+GFV++ + ++ + G + RL
Sbjct: 442 DAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIG-MKRL 500
Query: 505 RV 510
+V
Sbjct: 501 KV 502
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQS 471
++F+G S +++++ F+TF + V+ G SK FV + A + +
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISAL 184
Query: 472 GGVMFSP 492
G P
Sbjct: 185 HGSQTMP 191
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGGVMFSPLGRL 504
D +L + F+ F + +A+V DRA SKC+GFV++ + ++ + G + RL
Sbjct: 442 DAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIG-MKRL 500
Query: 505 RV 510
+V
Sbjct: 501 KV 502
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQS 471
++F+G S +++++ F+TF + V+ G SK FV + A + +
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISAL 184
Query: 472 GGVMFSP 492
G P
Sbjct: 185 HGSQTMP 191
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVK 465
++V F E L K F+ F +T+ V+ G SK +GFV FA+P A+ V+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQ 210
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVK 465
++V F E L K F+ F +T+ V+ G SK +GFV FA+P A+ V+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQ 207
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVK 465
++V F E L K F+ F +T+ V+ G SK +GFV FA+P A+ V+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQ 270
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVK 465
++V F E L K F+ F +T+ V+ G SK +GFV FA+P A+ V+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQ 270
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTF 432
N +FV + TTDEDL FS F + ++ D R+G S Y F+ F
Sbjct: 241 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTF 432
N +FV + TTDEDL FS F + ++ D R+G S Y F+ F
Sbjct: 241 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTF 432
N +FV + TTDEDL FS F + ++ D R+G S Y F+ F
Sbjct: 172 NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGG 477
D DL F+ F + +A+V D+ +SKC+GFV++ + + A + G
Sbjct: 348 DSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNG 398
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGG 477
D DL F+ F + +A+V D+ +SKC+GFV++ + + A + G
Sbjct: 512 DSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNG 562
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGG 477
D DL F+ F + +A+V D+ +SKC+GFV++ + + A + G
Sbjct: 512 DSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNG 562
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGG 477
D DL F+ F + +A+V D+ +SKC+GFV++ + + A + G
Sbjct: 441 DSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNG 491
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 DEDLWKFFSTFATVTAARVIYDRA-GVSKCYGFVTFASPRVAKLIVKQSGG 477
D DL F+ F + +A+V D+ +SKC+GFV++ + + A + G
Sbjct: 512 DSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNG 562
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTFASPRVAKLIV 462
+++ G T D+ L + S + + + + I D+A + K YGFV F SP+ A V
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 165
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS-KCYGFVTFASPRVAKLIV 462
+++ G T D+ L + S + + + + I D+A + K YGFV F SP+ A V
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 139
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFAS 438
+FV S T D LW+ FS F + +++ D K Y FV+ ++
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSN 423
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQ 468
N+IF+GG T++ + + +F + A + D G SK Y F + P + +
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 469 SGGV 480
G+
Sbjct: 351 LNGM 354
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQ 468
N+IF+GG T++ + + +F + A + D G SK Y F + P + +
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 469 SGGV 480
G+
Sbjct: 351 LNGM 354
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQ 468
N+IF+GG T++ + + +F + A + D G SK Y F + P + +
Sbjct: 266 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 325
Query: 469 SGGV 480
G+
Sbjct: 326 LNGM 329
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQ 468
N+IF+GG T++ + + +F + A + D G SK Y F + P + +
Sbjct: 269 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 328
Query: 469 SGGV 480
G+
Sbjct: 329 LNGM 332
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 301 VGGFSLT--TTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTF 432
+G F+L+ TT++DL F F + ++YDR +G S+ +GF+ F
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.23
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVA-KLIVKQS 471
++VG S TTD DL FST+ + R+ ++ Y FV + A K I++ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIF-----KTQRYAFVRYEKKECATKAIMEMN 293
Query: 472 GGVMFSPLGRLR--VAQAVRKQ-ISQLPV-LGTEAAPLQASVVLP 594
G M R QAV Q ++ LP+ L + P +P
Sbjct: 294 GKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLPTTIP 338
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTF 432
R+F G +DE L K F + + A+V+ + R SK YGFV+F
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +1
Query: 286 HNR---IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTF-ASPRVA 450
HNR ++VGGF+ T++ L F F V A + D +G + +GFV F + A
Sbjct: 7 HNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAA 66
Query: 451 KLIVKQSGGVMFSPLGRLRVAQAVR-KQISQLPV 549
I + +F R+ A+ + + SQ PV
Sbjct: 67 MAIDNMNESELFGKTIRVNFARPPKATERSQKPV 100
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFASPRVAKLIVKQSG 474
+FV TDE L F+ V A++I++ G++ Y FV F+ A L ++
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE--GLNDPYAFVEFSDHNQATLALQSHN 99
Query: 475 G 477
G
Sbjct: 100 G 100
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYD-RAGVSKCYGFVTFASPRVAKLIVKQ 468
R+F+ T ++DL F + V+ +V+ D + G K + V F P A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 469 SGGVMF 486
G +F
Sbjct: 340 LDGYVF 345
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFAS 438
+ V G TTDE K+F TV + G SK +GFV +S
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFAS 438
NRI+V + ++DL F + V + ++ + G SK +GFVT S
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDS 99
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 289 NRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFAS 438
NRI+V + ++DL F + V + ++ + G SK +GFVT S
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDS 99
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFA 435
++VG T T++ + F+ +VT +VI+D G + Y FV F+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD--GSNDPYAFVEFS 92
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 IHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTF 432
IH +F+GG T E++ + FS F V + D+ G K VTF
Sbjct: 317 IHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 280 VIHNRIFVGGFSLTTTDEDLWKFFSTFATV 369
V+ N++FVGG S + + KFF F TV
Sbjct: 202 VVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 IHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTF 432
IH +F+GG T E++ + FS F V + D+ G K VTF
Sbjct: 317 IHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 280 VIHNRIFVGGFSLTTTDEDLWKFFSTFATV 369
V+ N++FVGG S + + KFF F TV
Sbjct: 202 VVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 IHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTF 432
IH +F+GG T E++ + FS F V + D+ G K VTF
Sbjct: 103 IHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 153
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 IHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDR-AGVSKCYGFVTF 432
IH +F+GG T E++ + FS F V + D+ G K VTF
Sbjct: 317 IHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 280 VIHNRIFVGGFSLTTTDEDLWKFFSTFATV 369
V+ N++FVGG S + + KFF F TV
Sbjct: 202 VVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAG 402
++VG T T++ + F+ +VT +VI+D G
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDELG 83
>AC025726-4|AAK73922.1| 198|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 88
protein.
Length = 198
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 125 ANRLVARIWSRKAPPATERAPTP 193
A+ L+A WS++ PP+T P P
Sbjct: 8 ASSLIAATWSQRVPPSTTPVPPP 30
>Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical
protein F11D11.6 protein.
Length = 141
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -1
Query: 546 WELTYLFPDSLRDSQTPKRRKHYSATLLYDELRNSWTGECHEPVTLG---NACPIVDD 382
W L LFP + + Q PK Y L+Y + + + T+G N C + +D
Sbjct: 4 WSLGSLFPYLILELQLPKANCQYRTVLIYGGVASQGANDLTAFKTVGECKNGCFVKND 61
>Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical
protein C08B6.11 protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 220 NSIEP-SAFHGGRRSFCCWRSLPRPYARN 137
N++ P +++GG ++F CW+ + R +A N
Sbjct: 14 NNLAPIKSWYGGFKNFRCWKEVDRHFAFN 42
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 292 RIFVGGFSLTTTDEDLWKFFSTFATV 369
++F+GG + ++E +W F F V
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 295 IFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVS 408
++VG T T++ + F+ +VT +VI+D V+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMKVN 85
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 179 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 214
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 192 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 227
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 205 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 240
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 218 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 253
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 231 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 266
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 244 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 279
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 293 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 328
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 306 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 341
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 319 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 332 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 367
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 345 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 380
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 158 KAPPATERAPTPMKS*RLY*IPPKTTQKTPCRPPMP 265
K+ P T PT MKS P T + TP P P
Sbjct: 358 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 393
>AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical
protein Y110A7A.19 protein.
Length = 660
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = -1
Query: 531 LFPDSLRDSQTPKRRKHYSATLLY---DELRNSWTGECHEPVTLGNACPI-VDDPRGRHC 364
L + R+S K+ ++ T+ +E++NS TG+ +P+T + C + + G H
Sbjct: 331 LLDNEKRESDEQKKTYNHQLTVAISWLNEIQNSLTGKTLKPIT--STCNLFFVEAMGIHY 388
Query: 363 RESREELPQVFISGRQGEA 307
R + E L + +S + +A
Sbjct: 389 RAANENLAENLVSIYESKA 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,882,380
Number of Sequences: 27780
Number of extensions: 305221
Number of successful extensions: 915
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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