Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30797
         (570 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIN2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_A7NZY2 Cluster: Chromosome chr6 scaffold_3, whole genom...    33   6.2  
UniRef50_A1ZQR0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_Q8IIN2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 5922

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 511  WYSMHSSEF*MVTSSVNAILFKFHFAN-KLYWKLNNILNTYIIVSSLENIPVYI 353
            WYS+ S     +    N+ LF FH+ N KL+WK  ++L T  IV  L    +YI
Sbjct: 2813 WYSIASKIH--IDYFNNSELFYFHYMNEKLFWKDGSVLFTDKIVKLLNKKKLYI 2864


>UniRef50_A7NZY2 Cluster: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr6 scaffold_3, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 518

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 3   QIIIFGILPACGIRTPLHRYIRIHRTSYPLG 95
           Q+ + G+LPACG+   +HR   +H   Y +G
Sbjct: 249 QVTVTGLLPACGLMGSIHRGKELHGLIYRMG 279


>UniRef50_A1ZQR0 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 575

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 481 MVTSSVNAILFKFHFANKLYWKLNNILNTYII--VSSLENIP--VYICIYTKPTN 329
           + + SV+ +  +    N   +K+N +LNTY++  ++ L  IP  +YI  YTK +N
Sbjct: 113 ITSGSVHNLFLQIELVNNQAYKVNILLNTYVMLPIALLLAIPYVLYILRYTKTSN 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,521,947
Number of Sequences: 1657284
Number of extensions: 10553720
Number of successful extensions: 19829
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19821
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)