Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30797
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-20|CAE18022.1|  214|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z48334-3|CAA88310.1|  471|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z99281-20|CAE18022.1|  214|Caenorhabditis elegans Hypothetical
           protein Y57G11C.39 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 20  DFTRLRDSNTVASLYTNTPDILS 88
           D TRL++ N +A+LYT+  D +S
Sbjct: 147 DITRLQEKNRIANLYTSLEDDVS 169


>Z48334-3|CAA88310.1|  471|Caenorhabditis elegans Hypothetical
           protein F10B5.3 protein.
          Length = 471

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 459 PYCLSFTSPTSYTGNXXXXXXXXXXLAHSRTYLYIYAFIPNQQIIAQC 316
           P   S  +PT+  GN            HS   L+I+  + + Q +AQC
Sbjct: 376 PNVSSIFAPTNPAGNIPIQCSLCPFSTHSTDLLFIHLAMQHAQELAQC 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,924,606
Number of Sequences: 27780
Number of extensions: 257623
Number of successful extensions: 482
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)