Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30796
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.5  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 130 SCPDRTRDLRTNK*NK*KEFTCRLQSRTPIRSRCFSPRGTC 252
           SC DR  D   N  N  K  TC L+      + C    GTC
Sbjct: 120 SCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTC-KNGGTC 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 325  WPTETVTIPP 296
            WPT+  TIPP
Sbjct: 1079 WPTQGTTIPP 1088



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 269  RRQEIPGSVRWNRHRLRGPLSSESKCSPQR 358
            R+Q   G + WN+ R        +KC  ++
Sbjct: 1127 RKQYCAGGLHWNKERKICDWPKSAKCEEKK 1156


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 108 AVLYVLTMSKHNFVPLLAISMC 43
           AVLY + M  H F      +MC
Sbjct: 483 AVLYTIHMGYHGFHNPFTCNMC 504


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 375 WHTTNLYRHPKIYEYVEQLA 434
           WH T+    P + + V QLA
Sbjct: 274 WHLTDSQSFPLVSQRVPQLA 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,948
Number of Sequences: 336
Number of extensions: 3473
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)