Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30796
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 159 2e-39
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 155 2e-38
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 138 2e-33
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 58 6e-09
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 56 2e-08
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 54 1e-07
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 51 5e-07
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 50 1e-06
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 45 4e-05
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 32 0.26
11_04_0381 - 16999529-16999778,16999855-17000102 31 0.46
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 29 2.5
04_03_1035 - 21887562-21890030 29 2.5
08_02_0459 + 17420156-17420976,17422291-17424199 29 3.3
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 28 4.3
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 28 4.3
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 28 4.3
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 28 4.3
06_03_0449 + 20907491-20910146,20910313-20910782 28 5.7
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 5.7
11_04_0153 + 14159820-14162417 27 7.5
09_04_0189 + 15438538-15438591,15438671-15438891,15438982-154392... 27 7.5
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 27 7.5
08_02_1545 - 27790328-27790358,27790512-27791110,27791428-277916... 27 10.0
08_02_0960 + 23058393-23059739 27 10.0
05_05_0187 - 23094816-23095466 27 10.0
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 27 10.0
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 159 bits (385), Expect = 2e-39
Identities = 72/139 (51%), Positives = 101/139 (72%)
Frame = +3
Query: 135 PRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTV 314
PRPY G S ++ + ++ S+ Y+KP+ + +G MQ+LYD +GKRYLD FGGIVTV
Sbjct: 58 PRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTV 117
Query: 315 SVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEAN 494
S GHCHP + A+ +Q +L HTT +Y + I E+ E LA+K+PG+L VVY VNSG+EAN
Sbjct: 118 SCGHCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKMPGNLKVVYFVNSGTEAN 177
Query: 495 ELATLLAKAYTGNLDIISL 551
ELA L+A+ Y+GNL++I+L
Sbjct: 178 ELAMLMARLYSGNLNMIAL 196
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 155 bits (376), Expect = 2e-38
Identities = 72/158 (45%), Positives = 103/158 (65%)
Frame = +3
Query: 78 ASTSSERTARPKCRRRHFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQW 257
A+ + A P+ + VP PY GPS ++ + + ++ PS+ + Y KP+ + +G MQ+
Sbjct: 15 AAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKPLNIVEGKMQY 74
Query: 258 LYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAA 437
L+D G+RYLD F GI TV GHCHP V A+ Q L H+T LY + I ++ E LA+
Sbjct: 75 LFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNHAIADFAEALAS 134
Query: 438 KLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISL 551
K+PGDL VV+ NSG+EANELA ++A+ YTG+ DIISL
Sbjct: 135 KMPGDLKVVFFTNSGTEANELAIMMARLYTGSHDIISL 172
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 138 bits (335), Expect = 2e-33
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
Frame = +3
Query: 102 ARPKCRRRHFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT-------QGHMQWL 260
A PK + P PY GP +++ + + ++ PS+ + Y +P + + ++L
Sbjct: 41 AAPKMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYHKYL 100
Query: 261 YDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAK 440
+D DG+RYLD FGGI TV GHCHP V A+ +Q + H+T LY + I ++ E LAAK
Sbjct: 101 FDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEALAAK 160
Query: 441 LPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISL 551
+PGDL VV+ NSG+EANELA ++A+ YTG DIISL
Sbjct: 161 MPGDLKVVFFTNSGTEANELALMIARLYTGCHDIISL 197
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 57.6 bits (133), Expect = 6e-09
Identities = 32/118 (27%), Positives = 59/118 (50%)
Frame = +3
Query: 171 EQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAA 350
E++ + S N + PV+ ++G + D +G +Y+D V+ GHCHPKV A
Sbjct: 40 EELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRA 99
Query: 351 LKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
LK+Q + L ++ + + K + E L + ++ +N+G+E E A L + +
Sbjct: 100 LKEQAERLTLSSRAFYNDKFPIFAEYLTSMF--GYEMMLPMNTGAEGVETAIKLVRKW 155
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 204 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 380
I Y + V+L G LYD DG+ YLD+ GI ++GH P AA+ Q L H
Sbjct: 74 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 133
Query: 381 TTNL-YRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
+N+ Y P++ ++L D V+ N+G+EANE A A+ +
Sbjct: 134 ASNVQYTVPQV-ALAKRLVEASFADR--VFFANTGTEANEAAIKFARKF 179
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Frame = +3
Query: 204 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 380
I Y + V+L G LYD DG+ YLD+ GI ++GH P AA+ Q L H
Sbjct: 78 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 137
Query: 381 TTNL-YRHPKI-YEYVEQLAAKLPGDLNV---VYLVNSGSEANELATLLAKAY 524
+N+ Y P+ E V A + + V+ N+G+EANE A A+ Y
Sbjct: 138 ASNVQYTVPQASLERVTPTAHHRLVEASFADRVFFANTGTEANEAAIKFARKY 190
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 395
P+++ + ++YD DGK+YLD G+ ++G P++ A +QL L +H+ N
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRT 570
Query: 396 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL 536
P + E L+ ++ V+ NSGSEAN+ L Y L
Sbjct: 571 TKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNNAL 617
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +3
Query: 255 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLYRHPKIYEYVE 425
++YD+ G +YLD G+ ++G P++ A DQL+ L +H+ N P + E
Sbjct: 59 YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEE 118
Query: 426 QLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL 536
++ ++ V+ NSGSEAN+ L Y L
Sbjct: 119 LISMFTAKEMGKVFFTNSGSEANDSQVKLVWYYNNAL 155
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 395
P+++ + ++YD +GK+Y+D G+ + ++G P++ A DQL+ L +H+ N
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRT 181
Query: 396 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL 536
P + E L+ ++ ++ NSGSEAN+ L Y L
Sbjct: 182 TKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNAL 228
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 222 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 401
+P++ ++D DG Y+D G +GH VNAAL ++ L T+ +
Sbjct: 85 QPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAAL---IETLKKGTS-FGA 140
Query: 402 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDII 545
P + E V E + + +P + +V VNSG+EA A L +A+TG I+
Sbjct: 141 PCVLENVLAEMVISAVP-SIEMVRFVNSGTEACMGALRLVRAFTGREKIL 189
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 192 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 341
MPP T KPVL +G QW ND + + GI+TV + H P +
Sbjct: 432 MPPRPTRDEDKPVLTPKGDRQW-QANDFGGNIRVPTGILTVIIKHFFPGI 480
>11_04_0381 - 16999529-16999778,16999855-17000102
Length = 165
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 192 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 341
MPP T KPV+ +G QW ND + + GI+TV + H P +
Sbjct: 64 MPPRPTRDEDKPVMTPKGDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 112
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 192 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 341
MPP T KPVL + QW ND + + GI+TV + H P +
Sbjct: 20 MPPRPTRDEDKPVLTPKRDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 68
>04_03_1035 - 21887562-21890030
Length = 822
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 244 GTCSGYTTTTARDTWICSVESSPSP 318
GTCS Y+ A D ++CS + SP
Sbjct: 87 GTCSPYSAVVAGDGYLCSAAPTSSP 111
>08_02_0459 + 17420156-17420976,17422291-17424199
Length = 909
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 486 LIHCSLNIPRSNPPGA*RLIVRRTHRFS 403
L+H LNIPR P RL++ H FS
Sbjct: 795 LLHLHLNIPRGEPGYEDRLLISGCHGFS 822
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 101 STAKMPPTAFRA-QTVHGTFVPTSRTNERSLHAAFNHERL*EAGASHPGAHAVVIRQRRQ 277
S + +P R+ Q + G +P E RL EAGA P +R RR
Sbjct: 134 SKSGLPERGARSPQAMVGAVMPIGGVREGGQAEPAVPSRLPEAGALVPIHRLKSLRIRRS 193
Query: 278 EIPGSVR-WNRHRLRGPLS 331
P S W RH R PL+
Sbjct: 194 TPPSSSSWWRRHCNRTPLT 212
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 28.3 bits (60), Expect = 4.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 349 PSKINSMYCGIRPTCTDIRKSM 414
PSK++S++CG + CT +K++
Sbjct: 90 PSKLSSVFCGTQDKCTACKKTV 111
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 PPTAFRAQTVHGTFVPTSRTNERSLHAAF--NHERL*EAGASHPGAHAVVI 262
P + A HG P + ++ + AA NH R +P AHAV +
Sbjct: 62 PNPSHHATAAHGILYPVATSSAAAAAAAATANHRRAPAVAVGYPRAHAVAV 112
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 VGHCHPKVNAALKDQLDVLWHTTNLYRH---PKIYEYVEQLAAKLPGDLNVVYLVNSGSE 488
VG P++ A +QL+ L + + H P + E ++ ++ V+ NSGSE
Sbjct: 22 VGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGSE 81
Query: 489 ANELATLLAKAYTGNL 536
AN+ + Y L
Sbjct: 82 ANDSQVKIVWYYNNAL 97
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 390 LYRHPKI---YEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISL 551
++RH K+ Y Y L+ +LP ++ LV +N+L +++ + GNL +SL
Sbjct: 271 VFRHQKLERLYLYENSLSGELPRNVTTANLVEIDLSSNQLGGEISEDF-GNLKNLSL 326
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 193 M*TPFICSTCWYEGPVYGLG 134
M T ICSTC+YE V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293
>11_04_0153 + 14159820-14162417
Length = 865
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 302 NRHRLRGPLSSESKCSPQRSTRCIV 376
N HR RG L+ S S QRSTR +V
Sbjct: 482 NGHRSRGGLADNSGGSSQRSTRPLV 506
>09_04_0189 +
15438538-15438591,15438671-15438891,15438982-15439214,
15439322-15439541,15440091-15440212,15441086-15441339,
15441425-15441532,15441622-15441828,15441929-15442213,
15442312-15442467
Length = 619
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GGIVTVSVGHCHPKVNAALKDQLDVLW 377
GG+V G+ H +V A D++DV+W
Sbjct: 582 GGVVHFLEGYTHHEVGAIDVDRIDVVW 608
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 310 VTIPPNRSRYLLPSLSYNHCMCPWV 236
V PP L ++SY HC C W+
Sbjct: 397 VKTPPVPWLVLTDAISYGHCQCQWL 421
>08_02_1545 -
27790328-27790358,27790512-27791110,27791428-27791648,
27791852-27792071
Length = 356
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 475 TVDQKLMNWRLCWRKRTQET*TSYRC 552
TVD+K W+L W ++ E RC
Sbjct: 17 TVDKKKQEWKLTWEEKVVEVLHIVRC 42
>08_02_0960 + 23058393-23059739
Length = 448
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 317 RGPLSSESKCSPQRSTRCIVAYDQPVQTSENL*VRRTIS 433
RGPLS S+ P R + C+ ++ P + N V T++
Sbjct: 225 RGPLSLVSQLGPSRFSYCLTSFLSPEPSRLNFGVFATLN 263
>05_05_0187 - 23094816-23095466
Length = 216
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 318 VGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 452
VG C V A+ +D +W + P+ Y++ + L GD
Sbjct: 54 VGQCCSAVVQAIAAPVDAVWSVVRRFDRPQAYKHFIRSCRLLDGD 98
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 508 KVASSLASDPLFTKYTTFKSPGSLAANCSTYS*IF 404
K+ SL DP F+ T K PG L + +Y+ +F
Sbjct: 785 KLEMSLLKDPFFSTILTGKLPGDLDESDPSYNFLF 819
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,222,418
Number of Sequences: 37544
Number of extensions: 392925
Number of successful extensions: 1093
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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