Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30796
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 58 6e-09
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 58 6e-09
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 6.8
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 27 9.0
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 159 bits (385), Expect = 2e-39
Identities = 71/130 (54%), Positives = 96/130 (73%)
Frame = +3
Query: 162 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 341
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 342 NAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKA 521
NAAL +Q LWHTT++Y IYEY E+L +K P LN V+ VNSGSEAN+LA LA+
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARN 120
Query: 522 YTGNLDIISL 551
YTG D+IS+
Sbjct: 121 YTGRFDVISM 130
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 74.5 bits (175), Expect = 5e-14
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 401
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 402 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDII 545
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAI 152
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 74.5 bits (175), Expect = 5e-14
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 401
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 402 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDII 545
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+ YT + D I
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAI 152
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 404
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 405 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 404
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 405 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
+ EY E+ KL + V +N+G EA E A LA+ +
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLARRW 137
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 389
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 18 ILQSPQQRNTSKWLIEEQNYASTSSERTARPKCRRRH-FVPRPYTGPSYQQVEQMKGVYM 194
++ P + + SK +I+ Q Y + + P+ H ++P S+Q+V+ Y+
Sbjct: 995 LIAKPTESHASKIVIQHQ-YIPLAMRHQSVPRLPSEHNYIPIAIHDDSHQKVDLTNHQYL 1053
Query: 195 PPSITNAYKKPVLL 236
PP + K+ V L
Sbjct: 1054 PPIVNAEQKEAVKL 1067
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 18 ILQSPQQRNTSKWLIEEQNYASTSSERTARPKCRRRH-FVPRPYTGPSYQQVEQMKGVYM 194
++ P + + SK +I+ Q Y + + P+ H ++P S+Q+V+ Y+
Sbjct: 995 LIAKPTESHASKIVIQHQ-YIPLAMRHQSVPRLPSEHNYIPIAIHDDSHQKVDLTNHQYL 1053
Query: 195 PPSITNAYKKPVLL 236
PP + K+ V L
Sbjct: 1054 PPIVNAEQKEAVKL 1067
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +3
Query: 246 HMQWLYDNDGKRYLDLF-GGIVTVSVGH-----C---HPKVNAALKDQLDVLWHTTNLYR 398
H +WL+ N K Y F G + T+ +G C K+ + ++DV W N
Sbjct: 205 HGKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQVDKIKTSEIPKMDVKWKVQNCL- 263
Query: 399 HPKIYEYVEQLAAKLPGD 452
+++ + ++ +KLP D
Sbjct: 264 -AQLFTVLNKIMSKLPDD 280
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 108 PKCRRRHFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 227
PK + P+ G YQQ++Q PP + NAY+ P
Sbjct: 203 PKVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 336 KVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAK 440
K ++ +D++ V W T + R P IY+ + L K
Sbjct: 343 KPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPK 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,337,552
Number of Sequences: 27780
Number of extensions: 329948
Number of successful extensions: 971
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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