Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30796
         (553 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p...   167   3e-42
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p...   145   2e-35
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p...   144   5e-35
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ...    64   6e-11
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc...    61   4e-10
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas...    41   5e-04
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm...    41   6e-04
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas...    40   0.001
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ...    28   4.8  
At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B...    28   4.8  
At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B...    27   8.3  

>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 476

 Score =  167 bits (407), Expect = 3e-42
 Identities = 75/139 (53%), Positives = 102/139 (73%)
 Frame = +3

Query: 135 PRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTV 314
           PRPY GPS  +V Q +  ++ PS+ + Y+KP+ + +G MQ+LYD  G+RYLD F GIVTV
Sbjct: 48  PRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTV 107

Query: 315 SVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEAN 494
           S GHCHP +  A+ +Q  +L H T +Y H  I ++ E LAAK+PG+L VVY VNSGSEAN
Sbjct: 108 SCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGSEAN 167

Query: 495 ELATLLAKAYTGNLDIISL 551
           ELA ++A+ YTG+L++ISL
Sbjct: 168 ELAMMMARLYTGSLEMISL 186


>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 481

 Score =  145 bits (351), Expect = 2e-35
 Identities = 67/172 (38%), Positives = 107/172 (62%)
 Frame = +3

Query: 36  QRNTSKWLIEEQNYASTSSERTARPKCRRRHFVPRPYTGPSYQQVEQMKGVYMPPSITNA 215
           +  +S+   +  +    +   T  PK    ++ P PY GPS  ++   +  ++ P++ + 
Sbjct: 20  RHGSSQTAAQRTSSVRETETETKLPKMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHF 79

Query: 216 YKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLY 395
           Y  P+ + +  MQ+++D +G+RYLD FGGI TVS GHCHP+V  ++  QL ++ H+T LY
Sbjct: 80  YNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILY 139

Query: 396 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISL 551
            +  I ++ E L + LPGDL VV+  NSG+EANELA ++A+ YTG  DI+SL
Sbjct: 140 LNHTISDFAEALVSTLPGDLKVVFFTNSGTEANELAMMMARLYTGCNDIVSL 191


>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 477

 Score =  144 bits (348), Expect = 5e-35
 Identities = 66/141 (46%), Positives = 93/141 (65%)
 Frame = +3

Query: 129 FVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIV 308
           + P PYTGPS   +   +  ++ PS+   Y+KP+ +  G MQ+L+D  G+RYLD F GI 
Sbjct: 48  YTPPPYTGPSADVILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIA 107

Query: 309 TVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSE 488
            V+ GHCHP V   + +Q+  L H T LY +  I ++ E LA+KLPGDL VV+  NSG+E
Sbjct: 108 VVNCGHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTE 167

Query: 489 ANELATLLAKAYTGNLDIISL 551
           ANELA ++AK YTG  DI+++
Sbjct: 168 ANELALMMAKLYTGCQDIVAV 188


>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
           ornithine--oxo-acid aminotransferase, putative similar
           to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
           (Ornithine--oxo-acid aminotransferase) [Aspergillus
           nidulans] {Emericella nidulans}; contains Pfam profile
           PF00202: aminotransferase, class III
          Length = 475

 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 33/108 (30%), Positives = 60/108 (55%)
 Frame = +3

Query: 201 SITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 380
           S  N +  PV+ ++ +   ++D +GKRY+D       V+ GHCHPK+  AL++Q++ L  
Sbjct: 51  SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKLTL 110

Query: 381 TTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
           ++  + + K   + E+L      D+  V  +N+G+E  E A  LA+ +
Sbjct: 111 SSRAFYNDKFPVFAERLTNMFGYDM--VLPMNTGAEGVETALKLARKW 156


>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
           mitochondrial, putative / acetylornithine transaminase,
           putative / AOTA, putative / ACOAT, putative similar to
           SP|O04866 Acetylornithine aminotransferase,
           mitochondrial precursor (EC 2.6.1.11) (ACOAT)
           (Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
           contains Pfam profile PF00202: aminotransferase, class
           III
          Length = 457

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 36/102 (35%), Positives = 54/102 (52%)
 Frame = +3

Query: 219 KKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYR 398
           + PV+L+ G    L+D +GK YLD   GI   ++GH  P    A+ +Q  VL H +N+Y 
Sbjct: 75  RAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVYY 134

Query: 399 HPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 524
                E  ++L A    D   V+  NSG+EANE A   ++ +
Sbjct: 135 TIPQIELAKRLVASSFADR--VFFCNSGTEANEAAIKFSRKF 174


>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
           (GSA 2) / glutamate-1-semialdehyde aminotransferase 2
           (GSA-AT 2) identical to GSA2 [SP|Q42522]
          Length = 472

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
 Frame = +3

Query: 222 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 401
           +PV++       + D DG  Y+D  G      +GH   +V AAL + +         +  
Sbjct: 79  QPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETM----KKGTSFGA 134

Query: 402 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDII 545
           P + E V  E + + +P  + +V  VNSG+EA      LA+A+TG    I
Sbjct: 135 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGKQKFI 183


>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
           gamma-amino-N-butyrate transaminase / GABA transaminase
           / beta-alanine--oxoglutarate aminotransferase identical
           to gamma-aminobutyrate transaminase subunit precursor
           [Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
           contains Pfam profile PF00202: aminotransferase, class
           III; identical to cDNA gamma-aminobutyrate transaminase
           subunit precursor, nuclear gene for mitochondrial
           product GI:14030434
          Length = 504

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
 Frame = +3

Query: 225 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 395
           P+++ +    ++YD+ GK+YLD   G+   ++G   P++ +A  +QL+ L  +H+  N  
Sbjct: 70  PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTLPFYHSFWNRT 129

Query: 396 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL 536
             P +      L       +   +  + GS+AN+    L   Y   L
Sbjct: 130 TKPSLDLAKVLLEMFTANKMAKAFFTSGGSDANDTQVKLVWYYNNAL 176


>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
           (GSA 1) / glutamate-1-semialdehyde aminotransferase 1
           (GSA-AT 1) identical to GSA 1 [SP|P42799]
          Length = 474

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = +3

Query: 222 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 401
           +PVL+       ++D DG  Y+D  G      +GH   +V AAL + +         +  
Sbjct: 81  QPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETM----KKGTSFGA 136

Query: 402 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYT 527
           P + E V  E + + +P  + +V  VNSG+EA      LA+A+T
Sbjct: 137 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT 179


>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
           protein
          Length = 527

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +2

Query: 263 RQRRQEIPGSVRWNRHRLRGPLSSESKCSPQRSTRCIVAYDQPVQTSE 406
           R RR+E    V     R       E +  P+R  R + AY  P++ +E
Sbjct: 134 RSRREEKEPEVVERGSRRHRDKKDEPEADPERDQRTVFAYQMPLKATE 181


>At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B21)
           identical to Cytochrome P450 71B21 (SP:Q9LTM2)
           [Arabidopsis thaliana]; similar to cytochrome P450
           GB:O65784 [Arabidopsis thaliana]
          Length = 499

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 363 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 452
           + ++W  T L RHP++ + ++Q   +L GD
Sbjct: 308 ITMIWALTELTRHPRVMKKLQQEIRELLGD 337


>At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B22)
           Identical to cytochrome P450 71B22
           (SP:Q9LTM1)[Arabidopsis thaliana];contains Pfam profile:
           PF00067 cytochrome P450
          Length = 500

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 363 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 452
           + ++W  T L RHP++ + ++Q   ++ GD
Sbjct: 308 ITMIWAMTELARHPRVMKKLQQEIREILGD 337


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,401,886
Number of Sequences: 28952
Number of extensions: 299898
Number of successful extensions: 794
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)