Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30790
         (646 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120...    29   2.4  
02_04_0311 + 21936812-21937861                                         29   2.4  
04_04_0057 + 22410167-22411330                                         29   3.2  
05_03_0373 - 13194723-13195847,13196219-13196809                       29   4.2  
12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947...    28   5.5  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   5.5  
01_06_0751 + 31690411-31690443,31692900-31694240                       28   7.3  
01_03_0163 + 13346586-13347809                                         28   7.3  
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859     27   9.7  
03_02_0076 - 5451137-5452503,5453439-5453866,5453949-5454046,545...    27   9.7  

>07_01_0172 -
           1201595-1201912,1202637-1202723,1202836-1202895,
           1203007-1203106,1203227-1203633,1204728-1204883,
           1204981-1205106,1205503-1205572,1205679-1205767
          Length = 470

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 517 DPQPPAAVLAS--SPFVTSQPTEELLREFETVYGAVELTHL 633
           DP  PA V  S  SP +  QP  EL+RE  T+   +E+ HL
Sbjct: 78  DPDHPAPVNLSLESPMLKVQPANELIREVATL--ELEIKHL 116


>02_04_0311 + 21936812-21937861
          Length = 349

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 451 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEE 582
           WLE  V  P    N+ + P    P PPA   +SSP   +   EE
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAAAEE 194


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 451 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 555
           WLE +V  P    N+ + P    P P AA  + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 396 VSEFGGTWFQLRR*WRVETRSVIDFDLRCSAR 301
           V+E G  + QL+R WR + R ++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>12_01_0951 -
           9471391-9471597,9471857-9471966,9473173-9473278,
           9474719-9475060,9475598-9475647,9476745-9477717
          Length = 595

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 528 PGSGSSFKSFCDLAAH*RTAAGIRNGLWCCR 620
           P  GS   S C +     TA G+  GLWCCR
Sbjct: 397 PSCGSYTASACPIYVESGTA-GVVIGLWCCR 426


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 400 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 519
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 493 ISEVPERVD-PQPPAAVLASSPFVTSQPT 576
           I E+P+R + P PPAA     P  T Q T
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQAT 223


>01_03_0163 + 13346586-13347809
          Length = 407

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 199 SWAAAIDLLTNDECRLLLEVED 264
           SW AA+D +T DE R LLE  D
Sbjct: 115 SWDAALDGITADEARALLESID 136


>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
          Length = 429

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 487 ENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 618
           +++SE+P    PQPPA+V+AS      QP +   R  +  Y A+
Sbjct: 167 DSLSELPP--PPQPPASVVASLAARPPQPRQLQRRPQDGAYRAL 208


>03_02_0076 -
           5451137-5452503,5453439-5453866,5453949-5454046,
           5454723-5454836,5455017-5455111,5455222-5455283,
           5455398-5455557,5456247-5456643
          Length = 906

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 514 VDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 618
           VD   PAA+L  + F TS   EELL     +Y ++
Sbjct: 292 VDAYQPAALLFCTSFETSYGVEELLNTLPRLYDSL 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,839,416
Number of Sequences: 37544
Number of extensions: 329736
Number of successful extensions: 951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)