Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30789
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.58 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 199 SSNAFRFEGWGSRCNYTATLELISQGGWRI 110
           + N+ ++ G      Y   +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 325 CTKDVHISTKHSLLAMIV--DNCFYELVAHLILWV 423
           C K  H+   H  L  +    N  Y L  HL+LW+
Sbjct: 227 CNKIKHLVNLHKNLVKVAKDHNSLYSL--HLLLWI 259


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 345 FDEALPPCH 371
           FDE+LP CH
Sbjct: 371 FDESLPGCH 379


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 345 FDEALPPCH 371
           FDE+LP CH
Sbjct: 378 FDESLPGCH 386


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 77  WLLEPIDIYNVNAPPTLRYK 136
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,490
Number of Sequences: 336
Number of extensions: 3637
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)