Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30788
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 334 5e-92
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 310 9e-85
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 310 9e-85
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 147 8e-36
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 147 8e-36
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 141 5e-34
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 141 5e-34
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 119 2e-27
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 113 9e-26
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 111 4e-25
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 100 2e-21
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 98 6e-21
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 98 6e-21
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 78 7e-15
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 74 1e-13
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 74 1e-13
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 73 2e-13
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 72 4e-13
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 71 1e-12
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 69 3e-12
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 66 3e-11
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 62 4e-10
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 60 1e-09
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 60 1e-09
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 55 5e-08
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 55 5e-08
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 52 3e-07
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 52 3e-07
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 52 3e-07
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 36 0.039
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 36 0.039
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 33 0.16
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 0.48
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 0.48
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 32 0.48
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 31 0.84
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 31 0.84
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 1.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 1.9
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 29 2.6
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 29 2.6
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 3.4
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 29 3.4
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 28 7.9
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 28 7.9
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 334 bits (820), Expect = 5e-92
Identities = 160/200 (80%), Positives = 176/200 (88%)
Frame = +1
Query: 130 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 309
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 310 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 489
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 490 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 670 RAVAHHTECTFIRVSGSKLV 729
RAVAHHTECTFIRVSGS+LV
Sbjct: 211 RAVAHHTECTFIRVSGSELV 230
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 310 bits (760), Expect = 9e-85
Identities = 148/200 (74%), Positives = 171/200 (85%)
Frame = +1
Query: 130 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 309
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 310 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 489
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 490 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 205
Query: 670 RAVAHHTECTFIRVSGSKLV 729
RAVAHHTECTFIRVSGS+LV
Sbjct: 206 RAVAHHTECTFIRVSGSELV 225
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 310 bits (760), Expect = 9e-85
Identities = 148/200 (74%), Positives = 171/200 (85%)
Frame = +1
Query: 130 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 309
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 310 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 489
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 490 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 670 RAVAHHTECTFIRVSGSKLV 729
RAVAHHTECTFIRVSGS+LV
Sbjct: 227 RAVAHHTECTFIRVSGSELV 246
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 147 bits (356), Expect = 8e-36
Identities = 72/137 (52%), Positives = 92/137 (67%)
Frame = +1
Query: 319 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 498
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 499 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 678
PD TY VGG QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 679 AHHTECTFIRVSGSKLV 729
A+ T+ FIRV GS+LV
Sbjct: 232 ANRTDACFIRVIGSELV 248
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 147 bits (356), Expect = 8e-36
Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Frame = +1
Query: 148 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 318
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 319 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 498
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 499 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 678
P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAV 242
Query: 679 AHHTECTFIRVSGSKLV 729
A+ T TF+R+ GS+L+
Sbjct: 243 ANQTSATFLRIVGSELI 259
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 141 bits (341), Expect = 5e-34
Identities = 72/181 (39%), Positives = 111/181 (61%)
Frame = +1
Query: 187 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 366
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 367 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 546
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 547 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKL 726
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 153 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 212
Query: 727 V 729
V
Sbjct: 213 V 213
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 141 bits (341), Expect = 5e-34
Identities = 72/181 (39%), Positives = 111/181 (61%)
Frame = +1
Query: 187 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 366
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 367 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 546
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 547 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKL 726
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 727 V 729
V
Sbjct: 221 V 221
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 119 bits (287), Expect = 2e-27
Identities = 57/148 (38%), Positives = 91/148 (61%)
Frame = +1
Query: 286 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 465
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 466 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 645
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 646 GTGKTLLARAVAHHTECTFIRVSGSKLV 729
G GKT+LA+AVA +T +FIRV GS+ V
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFV 232
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 113 bits (273), Expect = 9e-26
Identities = 51/95 (53%), Positives = 69/95 (72%)
Frame = +1
Query: 445 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 624
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 625 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKLV 729
V+LYG PGTGKTLLA+AVA+ T TFIR +GS LV
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLV 254
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 111 bits (268), Expect = 4e-25
Identities = 55/138 (39%), Positives = 85/138 (61%)
Frame = +1
Query: 316 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 495
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 496 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 675
P Y +GG DKQI+E+ E + LP+ H + F LGI PKGVL+YGPPGTGKT++ARA
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARA 230
Query: 676 VAHHTECTFIRVSGSKLV 729
VA T+ TF++++G +LV
Sbjct: 231 VAAQTKSTFLKLAGPQLV 248
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 99.5 bits (237), Expect = 2e-21
Identities = 43/89 (48%), Positives = 66/89 (74%)
Frame = +1
Query: 463 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 642
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 643 PGTGKTLLARAVAHHTECTFIRVSGSKLV 729
PGTGKTL+ARAVA+ T F ++G +++
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVM 281
Score = 84.2 bits (199), Expect = 9e-17
Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Frame = +1
Query: 376 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 549
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 550 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKLV 729
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G +L+
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 97.9 bits (233), Expect = 6e-21
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 463 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 642
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 643 PGTGKTLLARAVAHHTECTFIRVSGSKLV 729
PGTGKTL+ARAVA+ T F ++G +++
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIM 280
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 376 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 549
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 550 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKLV 729
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G +L+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 97.9 bits (233), Expect = 6e-21
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 463 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 642
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 643 PGTGKTLLARAVAHHTECTFIRVSGSKLV 729
PGTGKTL+ARAVA+ T F ++G +++
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIM 280
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 376 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 549
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 550 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKLV 729
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G +L+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 77.8 bits (183), Expect = 7e-15
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +1
Query: 457 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 636
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLY
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 637 GPPGTGKTLLARAVAHHTECTFIRVSGSKL 726
GPPG KTL+ARA+A + F+ V G +L
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPEL 529
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 616 PKGVLLYGPPGTGKTLLARAVA 681
P VL++G PG+GKTLL + VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 691 EC 696
EC
Sbjct: 448 EC 449
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 445
Query: 691 EC 696
EC
Sbjct: 446 EC 447
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 691 EC 696
EC
Sbjct: 448 EC 449
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 691 EC 696
EC
Sbjct: 448 EC 449
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 445
Query: 691 EC 696
EC
Sbjct: 446 EC 447
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 691 EC 696
EC
Sbjct: 448 EC 449
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 691 EC 696
EC
Sbjct: 448 EC 449
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +1
Query: 520 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 699
V GL+ K ++E++ LP K P++F + A PKGVLL+GPPGTGKT++ R VA + T
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 700 FIRVSGSKL 726
F +S S L
Sbjct: 377 FFNISASSL 385
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 672
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 673 AVAHHTECTFIRVSGSKLV 729
AVA+ T FI V G +L+
Sbjct: 587 AVANETGMNFISVKGPELL 605
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/73 (35%), Positives = 47/73 (64%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 691 ECTFIRVSGSKLV 729
++++ ++LV
Sbjct: 264 AIPMLQLAATELV 276
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 672
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 673 AVAHHTECTFIRVSGSKLV 729
AVA+ T F V G +L+
Sbjct: 587 AVANETGMNFFSVKGPELL 605
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/73 (35%), Positives = 47/73 (64%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 691 ECTFIRVSGSKLV 729
++++ ++LV
Sbjct: 264 AIPMLQLAATELV 276
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 508 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 687
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 688 TECTFIRVSGSKLV 729
+ + + V G +L+
Sbjct: 786 SNFSVVNVKGPELL 799
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 508 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 687
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 688 TECTFIRVSGSKLV 729
+ + + V G +L+
Sbjct: 786 SNFSVVNVKGPELL 799
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +1
Query: 514 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 693
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A ++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 694 CTFIRVSGSKLV 729
+ + V G +L+
Sbjct: 62 FSVVNVKGPELL 73
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +1
Query: 448 LPNKVDPLVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 618
L N VD ++ ++++V D+T + V G ++E + LP +P LF G+ QP
Sbjct: 153 LLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQP 210
Query: 619 -KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKL 726
KG+LL+GPPG GKTLLA+AVA ++ F +S S L
Sbjct: 211 VKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSL 247
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 691 ECTFIRVSGSKL 726
C FI + S L
Sbjct: 139 GCRFINLQVSNL 150
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 691 ECTFIRVSGSKL 726
C FI + S L
Sbjct: 142 GCRFINLQVSNL 153
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +1
Query: 529 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 708
+D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A + F
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264
Query: 709 VSGSK 723
+GS+
Sbjct: 265 TAGSE 269
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +1
Query: 463 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 639
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+G
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLFT--GNRKPWQGILLFG 158
Query: 640 PPGTGKTLLARAVAHHT-ECTFIRVSGSKLV 729
PPGTGK+ +A+AVA E TF +S S L+
Sbjct: 159 PPGTGKSYIAKAVATEAGESTFFSISSSDLM 189
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +1
Query: 520 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 699
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 700 FIRVSGSKLV 729
FI VSGS+ +
Sbjct: 354 FITVSGSEFL 363
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 691 ECTFIRVSGSKLV 729
FI ++GS+ V
Sbjct: 343 TVPFISMNGSEFV 355
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 511 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 690
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 691 ECTFIRVSGSKLV 729
FI ++GS+ V
Sbjct: 343 TVPFISMNGSEFV 355
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 514 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 687
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 688 TECTFIRVSGSKL 726
+ TF VS + L
Sbjct: 250 SSSTFFTVSSTDL 262
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 514 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 687
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 688 TECTFIRVSGSKL 726
+ TF VS + L
Sbjct: 250 SSSTFFTVSSTDL 262
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 514 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 687
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 688 TECTFIRVSGSKL 726
+ TF VS + L
Sbjct: 250 SSSTFFTVSSTDL 262
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +1
Query: 499 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 670 RAV 678
R +
Sbjct: 348 RQI 350
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +1
Query: 499 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 670 RAV 678
R +
Sbjct: 348 RQI 350
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +1
Query: 499 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 669
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
Query: 670 RAV 678
R +
Sbjct: 282 RQI 284
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 493 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 672
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 673 AVAHHTECTFIRVSGSKLV 729
AVA + F+ V G +L+
Sbjct: 512 AVATEFKIAFLSVKGPELL 530
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 493 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 672
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 673 AVAHHTECTFIRVSGSKLV 729
AVA + F+ V G +L+
Sbjct: 512 AVATEFKIAFLSVKGPELL 530
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 493 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 672
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 673 AVAHHTECTFIRVSGSKLV 729
AVA + F+ V G +L+
Sbjct: 512 AVATEFKIAFLSVKGPELL 530
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 619 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSKL 726
+ V+ YGPPGTGKTL A+++A H+ + ++G +
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDI 378
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 604 GIAQPKGVLLYGPPGTGKTLLARAVAHH 687
G+ +G L YGPPGTGK+ A+A H
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASH 220
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 604 GIAQPKGVLLYGPPGTGKTLLARAVAHH 687
G+ +G L YGPPGTGK+ A+A H
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASH 266
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 625 VLLYGPPGTGKTLLARAVAHH 687
+LL GPPGTGKT L + +A H
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQH 195
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 574 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 720
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 574 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 720
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 KGVLLY--GPPGTGKTLLARAVAHHTECTFIRVS 714
KG++L GPPG GKT +A+A+A F RVS
Sbjct: 328 KGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVS 361
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 628 LLYGPPGTGKTLLARAVAHH 687
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 628 LLYGPPGTGKTLLARAVAHH 687
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 625 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 714
+L+ G PGTGK+ L + VA FI VS
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVS 41
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 685 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 554
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 685 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 554
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 289 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 375
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 289 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 375
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 619 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 720
K +LL GP G GK+ LAR VA + I V+ S
Sbjct: 331 KMLLLSGPAGLGKSTLARIVARQAGYSTIDVNAS 364
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 625 VLLYGPPGTGKTLLARAVA 681
+L YGPPGTGKT A A
Sbjct: 65 LLFYGPPGTGKTTTVLAAA 83
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 625 VLLYGPPGTGKTLLARA 675
+L YGPPGTGKT A A
Sbjct: 51 LLFYGPPGTGKTSAALA 67
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 595 DALGIAQPKGVLLYGPPGTGKTLL 666
D I P+G+ LYG G GKT+L
Sbjct: 83 DTPKIISPRGIYLYGSVGCGKTML 106
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 619 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 714
K + +GPPG GKT +A+++A + R S
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYFRFS 537
>Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical
protein F25H9.4 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 225 EFITLGLKTTKI-LRFFGDNEL*LFNLGYVVRAKTLTLHRVHFHFSRESHIALLTLM 58
E IT G KT K+ L DN L+NL YV + T H F F+ E+ + +++++
Sbjct: 203 ELITDG-KTVKVCLALLADNSPILYNLFYVEKPGQTTFH--IFDFTYEAILGMVSIL 256
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 619 KGVLLYGPPGTGKTLLARAVA 681
+ VL+ GPP TGKT +A A++
Sbjct: 83 RAVLIAGPPATGKTAIALAMS 103
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 385 NDVTANCRVALRNESYTLHK-ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 561
N++T C V HK IL N ++ M+EK P+ST+E + K K IK+
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTMIEKNPESTFEDI--YTKHCKLIKKQ 212
Query: 562 IE 567
E
Sbjct: 213 SE 214
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 625 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 714
+LL G P +GKT ARA++ T + +S
Sbjct: 475 LLLSGAPDSGKTTWARAISRACHVTHVHIS 504
>AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear receptor
NHR-18 protein.
Length = 392
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 379 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 549
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 316 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 374
Query: 550 IKEVIELPVKHPELFDA 600
+ ++++ HPE+F+A
Sbjct: 375 VFNIMKIDFSHPEMFEA 391
>AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 18 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 379 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 549
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 318 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 376
Query: 550 IKEVIELPVKHPELFDA 600
+ ++++ HPE+F+A
Sbjct: 377 VFNIMKIDFSHPEMFEA 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,586,117
Number of Sequences: 27780
Number of extensions: 312965
Number of successful extensions: 1060
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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