Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30785
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DD857E Cluster: PREDICTED: hypothetical protein;... 35 1.3
UniRef50_Q75L40 Cluster: Putative uncharacterized protein OJ1127... 35 1.3
UniRef50_Q7NUT1 Cluster: Invasion protein; n=1; Chromobacterium ... 34 2.4
UniRef50_A5P4M3 Cluster: Putative uncharacterized protein precur... 33 5.4
UniRef50_A0JXJ0 Cluster: Oxidoreductase; n=14; Bacteria|Rep: Oxi... 33 5.4
UniRef50_Q9UF83 Cluster: Putative uncharacterized protein DKFZp4... 33 5.4
UniRef50_Q9HHK0 Cluster: Vng6359h; n=1; Halobacterium salinarum|... 33 5.4
UniRef50_Q4T6D8 Cluster: Chromosome undetermined SCAF8805, whole... 32 7.2
UniRef50_Q3JQ29 Cluster: Putative uncharacterized protein; n=5; ... 32 7.2
UniRef50_Q9SN46 Cluster: Extensin-like protein; n=4; Magnoliophy... 32 7.2
UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Hist... 32 9.5
UniRef50_Q5YVY4 Cluster: Putative sigma factor; n=1; Nocardia fa... 32 9.5
UniRef50_Q10ID0 Cluster: Retrotransposon protein, putative, Ty3-... 32 9.5
UniRef50_Q0JJB9 Cluster: Os01g0749100 protein; n=5; Oryza sativa... 32 9.5
>UniRef50_UPI0000DD857E Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 204
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 137 SEPPGPGARSPNSACRGTPRVPLPSPPL 220
++PP PG SP A R +PR P+P L
Sbjct: 50 TQPPSPGPHSPRPALRSSPRAAAPTPTL 77
>UniRef50_Q75L40 Cluster: Putative uncharacterized protein
OJ1127_B08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1127_B08.6 - Oryza sativa subsp. japonica (Rice)
Length = 404
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 261 PRHARASRVTSRAYRGGEGRGTRGVPRQALFGERAPGPGGSDV 133
P H A V + GG+GRG +G+ R G R GPGG+ V
Sbjct: 311 PEHVGAQAVQGNSLAGGQGRGHQGICR----GVREGGPGGARV 349
>UniRef50_Q7NUT1 Cluster: Invasion protein; n=1; Chromobacterium
violaceum|Rep: Invasion protein - Chromobacterium
violaceum
Length = 685
Score = 33.9 bits (74), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 125 NVITSEPPGPGARSPNSACRGTPRVPLPSP 214
+++ + PPGPG R+P R P P PSP
Sbjct: 256 SLLEALPPGPGQRAPEEPARDGPARPTPSP 285
>UniRef50_A5P4M3 Cluster: Putative uncharacterized protein
precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 1265
Score = 32.7 bits (71), Expect = 5.4
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -2
Query: 310 GAPPTDESAAYPRDARAASRPRVTRHVARLQGRRGEG 200
GA D++A PRDA ASRP AR GR G G
Sbjct: 481 GAGGRDQAAQAPRDAARASRPGAAVAPARHPGRGGAG 517
>UniRef50_A0JXJ0 Cluster: Oxidoreductase; n=14; Bacteria|Rep:
Oxidoreductase - Arthrobacter sp. (strain FB24)
Length = 374
Score = 32.7 bits (71), Expect = 5.4
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +1
Query: 205 PLSSPVGARRDA*RAGVTRRVRHAGRPHSRQSAARPGAVT 324
P SS +GA R A RA V VR GRP R AA GAV+
Sbjct: 335 PSSSTIGANR-AGRAAVAGIVRMLGRPPGRVPAASVGAVS 373
>UniRef50_Q9UF83 Cluster: Putative uncharacterized protein
DKFZp434C196; n=4; Homo/Pan/Gorilla group|Rep: Putative
uncharacterized protein DKFZp434C196 - Homo sapiens
(Human)
Length = 580
Score = 32.7 bits (71), Expect = 5.4
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 40 LRPPYSEPRRPVSVLVFST-LRTLLL*VLKCYNVRAARSRSSLTEQCLSWHAARPPPLSS 216
+ PP + PR P +T R L + SR+SL + + R PP +S
Sbjct: 274 MTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITRTPPRAS 333
Query: 217 PVGARRDA*RAGVTRRVRHAGRPHSRQSAARPGAVTLCKVSSRDGL 354
P G A G R G P P +L SR L
Sbjct: 334 PTGTPSRASPTGTPSRASLTGSPSRASLTGTPSRASLIGTPSRASL 379
>UniRef50_Q9HHK0 Cluster: Vng6359h; n=1; Halobacterium
salinarum|Rep: Vng6359h - Halobacterium salinarium
(Halobacterium halobium)
Length = 169
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 261 PRHARASRVTSRAYRGGEGRGTRGVPRQALFGERAPG 151
P A A R+ GG RG RG PR+A G R G
Sbjct: 40 PEPAAAGAAQHRSRTGGSPRGPRGTPRRARTGTRTTG 76
>UniRef50_Q4T6D8 Cluster: Chromosome undetermined SCAF8805, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 589
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 80 FSSSRPCELYYY--KC*NVITSEPPGPGARS-PNSACRGTPRVPLPSP 214
F RP L Y + + ++S P P ARS P S+ +G+P P+PSP
Sbjct: 90 FLGRRPAHLGYPAPRSPSSLSSATPSPPARSSPESSSQGSPSGPVPSP 137
>UniRef50_Q3JQ29 Cluster: Putative uncharacterized protein; n=5;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 857
Score = 32.3 bits (70), Expect = 7.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 258 RHARASRVTSRAYRGGEGRGTRGVPRQALFGERAP 154
RH R +R RA R G GR RGV ++A GE P
Sbjct: 331 RHGRVARGDDRALRDGRGRPVRGVAQRA--GEALP 363
>UniRef50_Q9SN46 Cluster: Extensin-like protein; n=4;
Magnoliophyta|Rep: Extensin-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 839
Score = 32.3 bits (70), Expect = 7.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +2
Query: 59 SPGDPSLFSSSRPCELYYYKC*N------VITSEP--PGPGARSPNSACRGTPRVPLPSP 214
SPG + FSS P + + C V+ S P P PG P+ + +P + +PSP
Sbjct: 380 SPGQCAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSP 439
Query: 215 P 217
P
Sbjct: 440 P 440
>UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Histone
H2A - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 713
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 62 PGDPSLFSSSRPCELYYYKC*NVITSEPPGPGARSPNSACRGTPRVPLPSP 214
P P L P C + + +PP PG R+P P+ P PSP
Sbjct: 601 PESPPLLPPREPVRTPDVFCSSPLHLQPPPPGRRAPELQAFFPPQTPSPSP 651
>UniRef50_Q5YVY4 Cluster: Putative sigma factor; n=1; Nocardia
farcinica|Rep: Putative sigma factor - Nocardia
farcinica
Length = 139
Score = 31.9 bits (69), Expect = 9.5
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = -2
Query: 319 PLRGAPPTDESAAYPRDARAASRPRVT---RH---VARLQGRRG 206
P RGAPPT AA P RA S P T RH V R + RRG
Sbjct: 93 PRRGAPPTPVGAARPGAGRAGSVPAGTGGPRHPGPVGRARPRRG 136
>UniRef50_Q10ID0 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=3; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy subclass - Oryza sativa subsp. japonica (Rice)
Length = 506
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 327 QRHRSGAXXXXXXXXXXXXTHAPRHARASRVTSRAYRGGEGRGTRGVPRQALFGER 160
+RHR+ + A RH V R GEGRG GV QA G +
Sbjct: 120 RRHRNDSAAARERRRGGTRATARRHGNGGSVARERRRSGEGRGEEGVLHQASGGPK 175
>UniRef50_Q0JJB9 Cluster: Os01g0749100 protein; n=5; Oryza
sativa|Rep: Os01g0749100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 713
Score = 31.9 bits (69), Expect = 9.5
Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Frame = +1
Query: 34 PALRPPYSEPRRPVSVLVFSTLRTLLL*VL----KCYNVRAARSRSSLTEQCLSWHAA-R 198
PA R YS P R + +L L L + N AA S SS LS +A
Sbjct: 560 PARRRRYSFPPRAAAAAARRSLSFLARPPLPLPPRAANAAAAPSPSSRGRHSLSLYARPT 619
Query: 199 PPPLSSPVGARRDA*RAGVTRRVRHAGRPHSRQSAARP 312
PPP P+ R A A TR R R S ARP
Sbjct: 620 PPPPPLPLPPRAAAATAPSTRGQRRRRRRRSLSLLARP 657
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,665,695
Number of Sequences: 1657284
Number of extensions: 10215965
Number of successful extensions: 41463
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 36868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41373
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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