Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30785
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0019 + 12311674-12311886,12312746-12312878,12312918-123131... 31 0.58
04_04_0232 + 23794109-23794399,23795290-23796621 31 0.58
12_02_0843 + 23593765-23593961,23594474-23594537 31 0.76
06_02_0315 - 14230234-14232771 31 0.76
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 29 1.8
09_06_0068 - 20661060-20661506,20662702-20662824,20663513-206637... 29 2.3
10_08_0827 + 20849312-20849833,20850352-20850417,20850786-208510... 29 3.1
08_02_0045 - 11560147-11560434,11560949-11560960,11561079-115611... 29 3.1
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 29 3.1
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 29 3.1
10_06_0145 + 11215895-11216860 28 4.1
05_02_0085 - 6465126-6466049 28 4.1
12_02_0129 - 13981684-13982529 28 5.4
12_02_0112 + 13783758-13784717 28 5.4
09_04_0659 + 19282366-19282584,19282668-19282759,19282868-192829... 28 5.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 5.4
02_04_0470 - 23183925-23184743,23184929-23185153 28 5.4
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 28 5.4
09_02_0357 + 7788946-7789326,7789620-7789997 27 7.1
03_02_0171 + 6126685-6127107,6127237-6127581,6127701-6127997,612... 27 7.1
12_01_0657 + 5567879-5568316 27 9.4
11_03_0222 + 11880333-11880551,11880667-11880736,11880839-118809... 27 9.4
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 27 9.4
10_07_0043 - 12317397-12317535,12317832-12318087,12318194-12318410 27 9.4
08_02_1595 - 28114751-28114858,28115018-28115283,28116609-281167... 27 9.4
08_02_0593 + 19078264-19078609,19078724-19082256 27 9.4
06_02_0225 + 13257655-13260693 27 9.4
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694... 27 9.4
03_01_0515 - 3864796-3865425 27 9.4
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 27 9.4
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 27 9.4
>11_04_0019 +
12311674-12311886,12312746-12312878,12312918-12313125,
12313342-12313558,12313564-12313848
Length = 351
Score = 31.1 bits (67), Expect = 0.58
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 152 PGARSPNSACRGTPRVPLPSPP 217
P A P CR P+ P PSPP
Sbjct: 322 PSAPKPKKVCREKPKTPAPSPP 343
>04_04_0232 + 23794109-23794399,23795290-23796621
Length = 540
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 142 AARSRSSLTEQCLSWHAARPPPLSSPVGARRD 237
A R +S C SW AA PPP S P+ D
Sbjct: 125 ALRGYASCRAVCASWRAALPPPTSRPLAPVAD 156
>12_02_0843 + 23593765-23593961,23594474-23594537
Length = 86
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = -1
Query: 242 HASRRAPTGEERGGGRAACHDRHCSVSELRDRAALTL*HFNTYSSKVRKVEKTRTETGLR 63
H T +E G R RHC++ L +L L N + +K +K +K++
Sbjct: 8 HKLYTTETAQETEGSRIHLQKRHCTILLLCSWTSLELKTPNDFKNKNKKKKKSQEHEQCN 67
Query: 62 GSEYGGLSAGF 30
G E G F
Sbjct: 68 GCEVRGEGFAF 78
>06_02_0315 - 14230234-14232771
Length = 845
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 261 PRHARASRVTSRAYRGGEGRGTRGVPRQALFGERAPGPGGSD 136
P+HA A+ + SR+ RGG G G G+ GP G +
Sbjct: 134 PKHASAAALRSRSRRGGVGGGGSAEASFRRAGDDRDGPAGKN 175
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 231 SRAYRGGEGRGTRGVP--RQALFGERAPGPGG 142
SR+YRGG G GV + G R GPGG
Sbjct: 197 SRSYRGGAGGSAAGVSGGDATVCGSRTSGPGG 228
>09_06_0068 -
20661060-20661506,20662702-20662824,20663513-20663770,
20665635-20666027
Length = 406
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 130 YNVRAARSRSSLTEQCLSWHAARPPPLSSPVGARRDA 240
Y+V+AAR + L E CL +A P +S V R A
Sbjct: 336 YSVKAARDIAKLAESCLLKNAKERPTMSEVVDVLRRA 372
>10_08_0827 +
20849312-20849833,20850352-20850417,20850786-20851082,
20851215-20851412,20851748-20851849,20851960-20852100,
20852171-20852278,20852588-20852670,20852829-20852991,
20853636-20853650,20853968-20854093
Length = 606
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 301 PTDESAAYPRDARAASRPRVTRHVARLQGRRGE 203
P AA PRD S P V RHV R G R E
Sbjct: 117 PVYRLAAGPRDLVVVSDPAVARHVLRGYGSRYE 149
>08_02_0045 -
11560147-11560434,11560949-11560960,11561079-11561102,
11561562-11561801
Length = 187
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 17 HRRGRTPH*DHHILSPGDPSLFSSSRPCELY 109
H GR PH DHH +S S +S PC ++
Sbjct: 53 HHGGRKPH-DHHTVSACIASPIASLTPCPIF 82
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +2
Query: 140 EPPGPGARSPNSACRGTPRVP-----LPSPPL 220
EPP P AR+P + +G P+VP P PP+
Sbjct: 212 EPPQPVARAPAAVQQGNPQVPSQAQAAPPPPV 243
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 137 SEPPGPGARSPNSACRGTPRVPLPSPPL 220
S PPGPG S RG R P P PPL
Sbjct: 45 SSPPGPG----RSRSRGISRWPPPPPPL 68
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 131 ITSEPPGPGARSPNSACRGTPRVPLPSPPL 220
++S P S N A TP P P PPL
Sbjct: 255 VSSTGSSPSPTSSNQAATATPPAPRPPPPL 284
>05_02_0085 - 6465126-6466049
Length = 307
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 146 PGPGARSPNSACRGTPRVPLPSPPL 220
P P PN +P++PLP PP+
Sbjct: 101 PSPPTPKPNQVAAVSPQLPLPLPPV 125
>12_02_0129 - 13981684-13982529
Length = 281
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 145 ARSRSSLTEQCLSWHAARPPPLSSPVGAR 231
AR + + LS A PPP S+P+G R
Sbjct: 113 ARGNLKICDLGLSQSTASPPPYSNPIGTR 141
>12_02_0112 + 13783758-13784717
Length = 319
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 145 ARSRSSLTEQCLSWHAARPPPLSSPVGAR 231
AR + + LS A PPP S+P+G R
Sbjct: 151 ARGNLKICDLGLSQSTASPPPYSNPIGTR 179
>09_04_0659 +
19282366-19282584,19282668-19282759,19282868-19282958,
19283393-19283512,19283638-19283730,19283795-19283933,
19284060-19284141,19284229-19284361,19285024-19286010
Length = 651
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 255 HARASRVTSRAYRGGEGRGTRGVPRQALFGERAP 154
H R SR T Y G + G GVP + F RAP
Sbjct: 395 HERTSRDTGGFYGGDDSHGECGVPAETYF--RAP 426
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +2
Query: 35 PH*DHHILSPGDPSLFSSSRPCELYYYKC*NVITSEPPGPGARSPNSACRGTPRVPLPSP 214
PH PG P P ++YY PP P NS+ P P PSP
Sbjct: 65 PHQPQFNFGPGPPQQQQPPPPPQMYY--------QPPPPPPPYGVNSSQPPPPPPPPPSP 116
Query: 215 P 217
P
Sbjct: 117 P 117
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 144 RPVPELAHRTVPVVARRASPSPLLPCR 224
RP +A+ T+P V R S P PCR
Sbjct: 278 RPPSPMAYSTLPTVRLRPSRRPSTPCR 304
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 182 RGTPRVPLPSPPL 220
RGTPR P P+PPL
Sbjct: 45 RGTPRTPRPTPPL 57
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +3
Query: 135 RQSRPVPELAHRTVP----VVARRASPSPLLP 218
R + P P AH T P V A RAS SPL P
Sbjct: 135 RSTAPTPPRAHTTPPCSRSVAAPRASTSPLRP 166
>03_02_0171 +
6126685-6127107,6127237-6127581,6127701-6127997,
6129763-6129990,6130716-6131036
Length = 537
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 247 AGVTRRVRHAGRPHSRQSAARPGAVTL 327
AG R R AGR +Q A PGAV L
Sbjct: 30 AGGGRPTRSAGRAQQQQRMAAPGAVNL 56
>12_01_0657 + 5567879-5568316
Length = 145
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 261 PRHARASRVTSRAYRGGEGRGTRGVPRQALFGERAPGP 148
PRH R V A GG G G G P + +R GP
Sbjct: 38 PRHRRRLAVALAANGGGGGDGDGGPPAEEGEEKRRKGP 75
>11_03_0222 +
11880333-11880551,11880667-11880736,11880839-11880944,
11881490-11881556,11881597-11881692
Length = 185
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 247 AGVTRRVRHAGRPHSRQSA-ARPGAVTLCKVSSRDG 351
A + R +R + RP +R+ A ARP V L VSS G
Sbjct: 29 AFLERHLRESVRPDARRPAEARPTTVALAAVSSAHG 64
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 137 SEPPGPGARSPNSACRGTPRVPLPSPP 217
S P P A P PR P P+PP
Sbjct: 563 SLPQAPAATPPQDPALTPPRAPTPTPP 589
>10_07_0043 - 12317397-12317535,12317832-12318087,12318194-12318410
Length = 203
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 243 SRVTSRAYRGGEGRGTRG 190
+RV + A GG GRGTRG
Sbjct: 90 ARVAASAVEGGAGRGTRG 107
>08_02_1595 -
28114751-28114858,28115018-28115283,28116609-28116703,
28117179-28118154,28118245-28118369,28118443-28118569,
28118606-28118843
Length = 644
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 47 HHILSPGDPSLFSSSRPCELYYYKC*N 127
HH+ SP P SSS+ + YY C N
Sbjct: 31 HHLRSPPPPPSPSSSKRVAVVYYLCRN 57
>08_02_0593 + 19078264-19078609,19078724-19082256
Length = 1292
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 219 RGGEGRGTRGVPRQALFGERAPGPGGSDVITFQH 118
RGG R + G P +A+ GE+ G D + H
Sbjct: 275 RGGGVRPSDGAPARAVLGEKVASAGNGDSMANVH 308
>06_02_0225 + 13257655-13260693
Length = 1012
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 319 PLRGAPPTDESAAYPRDARAASRPRVTRHVARLQGRRGEGD 197
P GAPP SA R P + +RL RRG GD
Sbjct: 20 PSGGAPPAAPSAGGARPGDLPLPPYGSSSSSRLVNRRGGGD 60
>04_04_0673 -
27168305-27168874,27168977-27169099,27169180-27169440,
27169723-27169970,27170403-27170483,27171530-27171902
Length = 551
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 130 YNVRAARSRSSLTEQCLSWHAARPPPLSSPVGARRDA*R 246
Y+VRAAR + L CL+ H P ++ V R A R
Sbjct: 440 YSVRAAREVAELAAGCLAKHGKDRPAMAEVVERLRRATR 478
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 131 ITSEPPGPGARSPNSACRGTPRVPLPSPP 217
+TS PP P P +P P PSPP
Sbjct: 79 VTSSPPPPPLPPPPPPPAASPPPPPPSPP 107
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSP 214
PPGPGAR+P ++ R P P P
Sbjct: 45 PPGPGARNPAASSAAAFRPP-PQP 67
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 322 SPLRGAPPTDESAAYPRDARAASRPRVTRHVARLQGRR 209
S RG P+ + A A AASR +T H A ++ RR
Sbjct: 131 SLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRR 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,746
Number of Sequences: 37544
Number of extensions: 317434
Number of successful extensions: 1672
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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