Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30785
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.30 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   0.30 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   2.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   3.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   6.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.4  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 70  PVSVLVFSTLRTLLL*VLKCYNVRAARSRSSLTEQCLSWH 189
           P+ ++  + +R L   ++ C +    R   + +EQC  WH
Sbjct: 78  PLGLIESTQVRDLFHLIVNCKDASTVRCSFATSEQCSEWH 117


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 70  PVSVLVFSTLRTLLL*VLKCYNVRAARSRSSLTEQCLSWH 189
           P+ ++  + +R L   ++ C +    R   + +EQC  WH
Sbjct: 78  PLGLIESTQVRDLFHLIVNCKDASTVRCSFATSEQCSEWH 117


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 310  GAPPTDESAAYPRDARAASRPRVTRHVARLQGRR 209
            G PPT  ++      RAA R R  R   R + RR
Sbjct: 1129 GLPPTPPASPRTAQRRAALRERQARFRERRRNRR 1162


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 125 FNTYSSKVRKVEKTRTETGLRGSEYGGLSAG 33
           F    +K RK +K + ETG  G   GGL  G
Sbjct: 263 FQNRRAKDRK-QKKKAETGSVGGGMGGLGGG 292


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 137 SEPPGPGARSPNSACRGTPRVPLPSPP 217
           S PP PG  S +       + PL +PP
Sbjct: 190 STPPTPGDDSDSMGASRHGKTPLATPP 216


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 137 SEPPGPG-ARSPNSACRGTPRVPLPSPPL 220
           S+PP    A  P +  +  P VPL +PP+
Sbjct: 107 SQPPTTRFAPEPRAEVKFVPSVPLKTPPV 135


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -2

Query: 415 TFSKISKFSKCLTTV----KLYPNGVRL 344
           TF+K++   +C TTV    KLY   +RL
Sbjct: 798 TFTKLTPIWRCATTVRKGRKLYQYTIRL 825


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,808
Number of Sequences: 2352
Number of extensions: 9500
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)