Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30785
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 33 0.83
AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein pr... 33 0.83
AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens ... 31 1.9
BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembr... 29 7.7
BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembr... 29 7.7
AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembr... 29 7.7
AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembr... 29 7.7
AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembr... 29 7.7
AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens ... 29 7.7
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 29 7.7
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 32.7 bits (71), Expect = 0.83
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 40 LRPPYSEPRRPVSVLVFST-LRTLLL*VLKCYNVRAARSRSSLTEQCLSWHAARPPPLSS 216
+ PP + PR P +T R L + SR+SL + + R PP +S
Sbjct: 274 MTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITRTPPRAS 333
Query: 217 PVGARRDA*RAGVTRRVRHAGRPHSRQSAARPGAVTLCKVSSRDGL 354
P G A G R G P P +L SR L
Sbjct: 334 PTGTPSRASPTGTPSRASLTGSPSRASLTGTPSRASLIGTPSRASL 379
>AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 32.7 bits (71), Expect = 0.83
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 40 LRPPYSEPRRPVSVLVFST-LRTLLL*VLKCYNVRAARSRSSLTEQCLSWHAARPPPLSS 216
+ PP + PR P +T R L + SR+SL + + R PP +S
Sbjct: 13 MTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITRTPPRAS 72
Query: 217 PVGARRDA*RAGVTRRVRHAGRPHSRQSAARPGAVTLCKVSSRDGL 354
P G A G R G P P +L SR L
Sbjct: 73 PTGTPSRASPTGTPSRASLTGSPSRASLTGTPSRASLIGTPSRASL 118
>AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ20219 fis, clone COLF3371. ).
Length = 651
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 199 PPPLSSPVGARRDA*RAGVTRRVRHAGRPHSRQSAARPGAVTLCKV--SSRDGLR 357
PP +SP GA R+G + R H G H Q AA G V C V RDG R
Sbjct: 583 PPGPASPGGAPEPP-RSGPSWRKPHGGEVHPDQGAAARGRVQGCLVWRGHRDGGR 636
>BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ30323 fis, clone BRACE2007109, highly similar to
Extensin-like protein NG5. ).
Length = 306
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSPPL 220
PPGP A +P C PR+P P P L
Sbjct: 89 PPGPAAGAPPPGCATLPRMP-PDPYL 113
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 143 PPGPGARSPNSACRGTPRVPLPSP 214
PPGP P ++ PR PLPSP
Sbjct: 28 PPGPRGPLPPASPAALPRCPLPSP 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,072,191
Number of Sequences: 237096
Number of extensions: 1742993
Number of successful extensions: 6589
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6574
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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