Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30779
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0149 - 1081805-1081821,1081860-1081941,1082412-1083425           30   1.5  
07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754           30   2.0  
07_03_1797 - 29624908-29624932,29625551-29625641,29625753-296258...    29   2.6  
09_04_0268 - 16253312-16253358,16253618-16253789,16253881-162543...    28   6.0  
09_06_0055 - 20550889-20551531,20551612-20551889,20552035-205522...    28   7.9  

>07_01_0149 - 1081805-1081821,1081860-1081941,1082412-1083425
          Length = 370

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 298 TTAASPFKPKRITASR*K*TGWWYLPVRTHKRYLLNINSPVPMFI 164
           T A+SPF P  I +       WW L  R H R L+N+ +P+ + +
Sbjct: 83  TAASSPFSPPAIGSPH----WWWALDCR-HGRVLINLFNPMELMV 122


>07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754
          Length = 316

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 304 IVTTAASPFKPKRITASR*K*TGWWYLPVRTHKRYLLNINSPVPMFI 164
           + TTAASPF P  I         WW L  R H R L ++ +P+ + +
Sbjct: 79  VPTTAASPFSPPAIDPP----NWWWALDCR-HGRVLSHLFNPMELMV 120


>07_03_1797 -
           29624908-29624932,29625551-29625641,29625753-29625891,
           29626256-29626346,29626481-29626522,29626644-29626696
          Length = 146

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 287 LALQTETHYCFTVEIDRVVVPTRADSQEIFTKYQFTCT-YVYYNQQKCCMQEFRESVKS 114
           + +Q   H C+   +D V+V  ++ ++E   K Q +C  Y+Y  Q + C    R S +S
Sbjct: 32  IEIQPRCHCCYVEFVDVVMVEDKSRAKE-HIKLQESCVGYIYSLQSQVCPVGCRASTQS 89


>09_04_0268 -
           16253312-16253358,16253618-16253789,16253881-16254359,
           16255723-16255801,16255918-16255923
          Length = 260

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 346 LRQPLNTRWAVSSSTHLCNKKGVTLKKKSYL*ILR 450
           +RQ +N R  VS S +   KKG TLK +S   +L+
Sbjct: 128 IRQLINKRIIVSKSKNSLGKKGNTLKPRSVASLLK 162


>09_06_0055 - 20550889-20551531,20551612-20551889,20552035-20552203,
            20552397-20552534,20553945-20553997,20554521-20554574,
            20556062-20556295,20556399-20556986,20557065-20557419,
            20557494-20557694,20557925-20557998,20558114-20558254,
            20558611-20558670,20558750-20558806,20559281-20559318,
            20559419-20559578
          Length = 1080

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 629  IHRQLIQWIG-LVEHPRWEKVVD 564
            + R+++QW   LVE  RWE++ D
Sbjct: 964  VKREIVQWAAPLVERRRWERLAD 986


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,637,726
Number of Sequences: 37544
Number of extensions: 474755
Number of successful extensions: 1100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)