Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30779
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70266-4|CAA94206.3|  534|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z68879-4|CAA93085.1|  215|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U40802-4|AAK19010.1|   80|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U41533-13|AAA83174.3|  955|Caenorhabditis elegans Hypothetical p...    28   7.0  
AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical...    28   7.0  

>Z70266-4|CAA94206.3|  534|Caenorhabditis elegans Hypothetical
           protein C40C9.2 protein.
          Length = 534

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 81  NLFFYLVID*RTLYRFAKLLHTTFLLVVINI 173
           +LFFYL+I  RTLY    L+  +FL+ ++ +
Sbjct: 231 SLFFYLIIQRRTLYYGLNLIIPSFLISLMTV 261


>Z68879-4|CAA93085.1|  215|Caenorhabditis elegans Hypothetical
           protein K08F4.5 protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 328 VVDVYGLRQPLNTRWAVSSSTHLCNKKGVTLKKK 429
           + +++GL Q L   + +  + HLC KKG   KKK
Sbjct: 4   LAEIHGLAQLLVLVFTLVVTAHLCGKKGAKNKKK 37


>Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = -2

Query: 394 DGWTSSQPTWC*VVAGAHRHLQRKCA-----THLSIVTTAASPFKPKRI 263
           DGW  ++  W  V   A   +Q+K A      H S+ T   + FK K I
Sbjct: 255 DGWAKNETWWMDVTRIAEDEIQKKAAQNRGDVHASVQTEVQNMFKNKSI 303


>Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = -2

Query: 394 DGWTSSQPTWC*VVAGAHRHLQRKCA-----THLSIVTTAASPFKPKRI 263
           DGW  ++  W  V   A   +Q+K A      H S+ T   + FK K I
Sbjct: 255 DGWAKNETWWMDVTRIAEDEIQKKAAQNRGDVHASVQTEVQNMFKNKSI 303


>U40802-4|AAK19010.1|   80|Caenorhabditis elegans Hypothetical
           protein ZC477.4 protein.
          Length = 80

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 494 LCLRTAVLVAWVIASHKNKVASQNRPPSPTLDAQLNQSTELVACES 631
           LC    +L     +S  +  +SQ RPPS +L A L++   +  C S
Sbjct: 3   LCSPLKILPGASSSSSSSTASSQIRPPSLSLSASLSEELRVEECGS 48


>U41533-13|AAA83174.3|  955|Caenorhabditis elegans Hypothetical
           protein R05F9.12 protein.
          Length = 955

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 310 GGWRIY-VVDVYGLRQPLNTRWAVSSSTHLCNKKGVTLKKKSYL*ILRHP*NW-GFDTPL 483
           G  R Y V ++YGL + +NT+ A+  +T    K+G  + + +Y    R+  +W G +T  
Sbjct: 535 GKQRFYNVKNLYGLTEAINTQKALFKAT---GKRGAVVSRSTYPSAGRYAGHWLGDNTAR 591

Query: 484 YRDV 495
           + D+
Sbjct: 592 WEDL 595


>AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical
           protein Y47D3B.4 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 299 YNGCLALQTETH-YCFTVEIDRVVVPTRADS 210
           YN C      TH Y   ++ID V+VP + D+
Sbjct: 317 YNDCFYNYIHTHRYVLIIDIDEVIVPIQFDN 347


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,397
Number of Sequences: 27780
Number of extensions: 396800
Number of successful extensions: 817
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)