Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30776
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   4.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.5  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   4.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 362 RTLARSSCRDPASR*TALYLRYPGSRAYIAVHQ 264
           RT+A  +   P       Y  YPG+ A +A +Q
Sbjct: 192 RTIALGAFYQPLQPFPPPYPFYPGTSAMLAAYQ 224


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 354 KGSCWCTLSQHSLRSMTYRIYVNKSCE*RTRPTCQWF 464
           +GS +   +    +  TY+I VN       + TC+ F
Sbjct: 467 RGSVFVRFTHLQHQPFTYKITVNNQSNGNRKGTCRIF 503


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 326 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDT 445
           ++D+  K  +  + V       T+NDLQ+L+     +K+T
Sbjct: 15  LQDIQTKVREEILSVVGKEKIPTYNDLQELKYTKRCIKET 54


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 267 MDSNVCSRSWIPQVQSSLPR 326
           +DS V SR+W  +  + +PR
Sbjct: 273 LDSLVASRTWPARPVNQVPR 292


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 143 IVVLGSGGVGKSAL 184
           + +LGS G GK+ L
Sbjct: 107 LAILGSSGAGKTTL 120


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 143 IVVLGSGGVGKSAL 184
           + +LGS G GK+ L
Sbjct: 107 LAILGSSGAGKTTL 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,653
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)