Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30775
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1660| Best HMM Match : DUF1241 (HMM E-Value=0.35) 65 6e-11
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 32 0.54
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 30 1.7
SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39) 30 1.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32974| Best HMM Match : NblA (HMM E-Value=3.7) 30 2.2
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_44978| Best HMM Match : REJ (HMM E-Value=3.9e-13) 29 3.8
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 5.1
SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 5.1
SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_8196| Best HMM Match : NGP1NT (HMM E-Value=0.89) 29 5.1
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 28 6.7
SB_4186| Best HMM Match : ADK (HMM E-Value=0.094) 28 6.7
SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7) 28 8.9
SB_54637| Best HMM Match : DUF1621 (HMM E-Value=3) 28 8.9
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 8.9
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 28 8.9
>SB_1660| Best HMM Match : DUF1241 (HMM E-Value=0.35)
Length = 142
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +2
Query: 140 VTSLVLPVLIRPVLTQLEK-YDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVN 316
+ +L L V+IRPVL +L K YD + ++ A +AE PG+ +LV+GIM++ +N
Sbjct: 11 IPNLALSVIIRPVLDELSKEYDEDTVKKIQKAFHQAEKENPGITQELVSGIMKKESDGIN 70
Query: 317 MNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAAL 433
MN++LL G TD + NR E F L KK+ A+
Sbjct: 71 MNKALLSCAGYNTD----EYNTNREEHEFVNLTKKARAV 105
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 317 MNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETI 496
M + LRLQ ++E + + EEA Q+L +K A KK+ +E+ RK+ +
Sbjct: 1159 MRQKQLRLQREREEAEHQEAERKKEEEAKQKLKQKEDARKKL-----EEVERRKSQQQAA 1213
Query: 497 KEIA 508
KE A
Sbjct: 1214 KEAA 1217
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 395 EAFQELNKKSAALKKILSRIPDEITDR--KTFLETIKEIASAIKKLLDAVNEVSTYTPGP 568
E E KKS +L+ L ++I D+ +FLE +K S + L VN++S +
Sbjct: 330 EIIAEALKKSTSLRS-LDLEGNKIGDKGGTSFLEALKVNESLVDLTLMPVNDISRHIHEE 388
Query: 569 GKQVLEQRKREFVKYSKRFSTT 634
K++L+ R ++ S R S T
Sbjct: 389 IKELLQGRAKQRPSTSSRKSDT 410
>SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39)
Length = 566
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/111 (26%), Positives = 48/111 (43%)
Frame = +2
Query: 308 PVNMNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFL 487
P+++ + LL L L T L+ T++ K + KK+LS ++ K L
Sbjct: 36 PLSLTKKLLSLTKKLLS--LTKKPLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLL 93
Query: 488 ETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFSTTLK 640
K++ S KKLL ++ + T K++L K+ K S T K
Sbjct: 94 SLTKKLLSLTKKLLSLTKKLLSLT----KKLLSLTKKLLSLTKKLLSLTKK 140
Score = 29.1 bits (62), Expect = 3.8
Identities = 37/154 (24%), Positives = 64/154 (41%)
Frame = +2
Query: 179 LTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTD 358
L L K L+ ++ L +LTK ++ L ++ +++ + LL L L
Sbjct: 50 LLSLTKKPLSLTKKL-LSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLS 108
Query: 359 SECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAV 538
T L+ T++ K + KK+LS ++ K L K++ S KKLL
Sbjct: 109 --LTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLT 166
Query: 539 NEVSTYTPGPGKQVLEQRKREFVKYSKRFSTTLK 640
++ + T K++L K+ K S T K
Sbjct: 167 KKLLSLT----KKLLSLTKKLLSLTKKLLSLTKK 196
Score = 29.1 bits (62), Expect = 3.8
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Frame = +2
Query: 323 ESLLRLQGSLTDS--ECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETI 496
+SL + SLT T L+ T++ K + KK+LS ++ K L
Sbjct: 325 QSLTKKLLSLTKKPLSLTKKPLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSLTKKLLSLT 384
Query: 497 KEIASAIKKLLDAVNEVSTYTPGP---GKQVLEQRKREFVKYSKRFSTTLK 640
K++ S KKLL ++ + T P K++L K+ K S T K
Sbjct: 385 KKLQSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKK 435
Score = 29.1 bits (62), Expect = 3.8
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Frame = +2
Query: 308 PVNMNESLLRLQG---SLTDS--ECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITD 472
P+++ + LL L SLT T L+ T++ K + KK+LS ++
Sbjct: 345 PLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSL 404
Query: 473 RKTFLETIKEIASAIKKLLDAVNEVSTYTPGP---GKQVLEQRKREFVKYSKRFSTTLK 640
K L K++ S KKLL ++ + T P K++L K+ K S T K
Sbjct: 405 TKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKPLSLTKKLLSLTKK 463
Score = 29.1 bits (62), Expect = 3.8
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = +2
Query: 179 LTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQG---S 349
L L K L+ ++ L + K ++ L L ++ P+++ + LL L S
Sbjct: 366 LLSLTKKLLSLTKKLLSLTKKLQSLTKKL-LSLTKKLLSLTKKPLSLTKKLLSLTKKLLS 424
Query: 350 LTDS--ECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKK 523
LT T L+ T++ K + KK+LS ++ K L K++ S KK
Sbjct: 425 LTKKLLSLTKKPLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKK 484
Query: 524 LLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFSTTLK 640
LL ++ + T K++L K+ K S T K
Sbjct: 485 LLSLTKKLLSLT----KKLLSLTKKLLSLTKKLLSLTKK 519
Score = 28.7 bits (61), Expect = 5.1
Identities = 38/161 (23%), Positives = 67/161 (41%)
Frame = +2
Query: 158 PVLIRPVLTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLR 337
P+ + L L K L+ ++ L +LTK ++ L ++ +++ + LL
Sbjct: 71 PLSLTKKLLSLTKKLLSLTKKL-LSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLS 129
Query: 338 LQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAI 517
L L T L+ T++ K + KK+LS ++ K L K++ S
Sbjct: 130 LTKKLLS--LTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLT 187
Query: 518 KKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFSTTLK 640
KKLL ++ + T K++L K+ K S T K
Sbjct: 188 KKLLSLTKKLLSLT----KKLLSLTKKLLSLTKKLLSLTKK 224
Score = 28.7 bits (61), Expect = 5.1
Identities = 31/134 (23%), Positives = 57/134 (42%)
Frame = +2
Query: 158 PVLIRPVLTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLR 337
P+ + L L K L+ ++ L +LTK ++ L ++ +++ + LL
Sbjct: 436 PLSLTKKLLSLTKKPLSLTKKL-LSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLS 494
Query: 338 LQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAI 517
L L T L+ T++ K + KK+LS ++ K L K++ S
Sbjct: 495 LTKKLLS--LTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLT 552
Query: 518 KKLLDAVNEVSTYT 559
KKLL ++ + T
Sbjct: 553 KKLLSLTKKLLSLT 566
Score = 27.9 bits (59), Expect = 8.9
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Frame = +2
Query: 230 ALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQG---SLTDS--ECTDLRLNRTE 394
+LTK ++ L ++ P+++ + LL L SLT T L+ T+
Sbjct: 410 SLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTK 469
Query: 395 EAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTPGPGK 574
+ K + KK+LS ++ K L K++ S KKLL ++ + T K
Sbjct: 470 KLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLT----K 525
Query: 575 QVLEQRKREFVKYSKRFSTTLK 640
++L K+ K S T K
Sbjct: 526 KLLSLTKKLLSLTKKLLSLTKK 547
Score = 27.9 bits (59), Expect = 8.9
Identities = 30/127 (23%), Positives = 54/127 (42%)
Frame = +2
Query: 179 LTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTD 358
L L K L+ ++ L +LTK ++ L ++ +++ + LL L L
Sbjct: 429 LLSLTKKPLSLTKKL-LSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLS 487
Query: 359 SECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAV 538
T L+ T++ K + KK+LS ++ K L K++ S KKLL
Sbjct: 488 --LTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLT 545
Query: 539 NEVSTYT 559
++ + T
Sbjct: 546 KKLLSLT 552
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 362 ECTDLRLNRTEEAFQELNKKSAAL----KKILSRIPDEITDRKTFLETIKEIASAIKKLL 529
E DL +N E E+N + L K++L E+TD K ++ ++ A ++K+L+
Sbjct: 1636 EKVDL-VNSLHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQDDADSVKRLV 1694
Query: 530 DAVNE 544
DA+ E
Sbjct: 1695 DAIIE 1699
>SB_32974| Best HMM Match : NblA (HMM E-Value=3.7)
Length = 200
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 503 IASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFV--KYSKRFSTTLKE 643
+ S+ +L A+NE+ TP P ++E+ RE ++SKR T+ +
Sbjct: 4 LQSSEDELASAINELQELTPAPMVSMMERESREVALERHSKRQKMTITD 52
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +2
Query: 371 DLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVS 550
D LNR +E +++KK ++ +S PD ++++ ++++ + +K L E+
Sbjct: 637 DKELNRLKEELTQVSKKVSSAVSEMSDTPDNVSNQ------VEKVVNELKSLKKKHEELE 690
Query: 551 TYTPGPGKQVLEQRKR 598
+ G ++ E KR
Sbjct: 691 NSSKGAERRSKEAEKR 706
>SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 61 NHWGFINFLDKLKYLNYHNDNGR 129
NH +N DKLKYLN HN + R
Sbjct: 61 NHRVKLNHRDKLKYLNKHNQDRR 83
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 281 AGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPD 460
A ++ + V ES L + + + SE + LR R +E Q L+ +KKI + + D
Sbjct: 407 AAVINSLEAKVRDLESRLSQRSNTSASEVSSLRA-RVQELEQTLDDADEHIKKIETEL-D 464
Query: 461 EITDRKTFL-ETIKEIASAIKKLLDAVNEVST 553
++ FL ET++ +L +A++E T
Sbjct: 465 GSKEQMMFLQETVRRECEERLELTEALSEART 496
>SB_44978| Best HMM Match : REJ (HMM E-Value=3.9e-13)
Length = 1819
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 606 TNSLFLCSNTCFPGPGVYVDTSFTASSNF 520
TN L +N FP PGV V ++TA N+
Sbjct: 581 TNKLTNVTNWAFPSPGVTVIHTYTAPGNY 609
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 670 KYSLSFFKVFFESSRKSL*IFYKFSFPLF*YLLPRTWSICRYLIYSIQ*FFYGR-GYFLD 494
+Y + VF +R+S+ +YKFSF F Y +P I Y + + + R G F
Sbjct: 188 RYGSKVYCVFNLETRRSIDTYYKFSFAFF-YAIPLAVVIVLYSAIMVTLWMHKRPGAFSS 246
Query: 493 SLKK 482
S ++
Sbjct: 247 SQQR 250
>SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 1125
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -3
Query: 670 KYSLSFFKVFFESSRKSL*IFYKFSFPLF*YLLPRTWSICRYLIYSIQ*FFYGRGYFLDS 491
+Y + VF +R+S+ +YKFSF F Y +P I Y + + + R S
Sbjct: 931 RYGSKVYCVFNLETRRSIDTYYKFSFAFF-YAIPLAVVIVLYSAIMVTLWMHKRPGAFSS 989
Query: 490 LKKSLPI 470
+++ I
Sbjct: 990 IQQRYQI 996
>SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1503
Score = 28.7 bits (61), Expect = 5.1
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 179 LTQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTD 358
LTQ + + +A +T++A + + L I RR + L L+ ++ +
Sbjct: 472 LTQSKLHGIAPGRTMQAVTNEYNDRQDRVE-TLNRHIDRRRREVTQLQRQLSTLENTINE 530
Query: 359 SECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIK-EIASAIKKLLDA 535
LRL+ + L ++ A L + EITD + L+ I+ E+ KK +
Sbjct: 531 LRSQKLRLSEQLQRRTNLEEQKAELIANSNTYEREITDAEAQLKPIESELREEEKKKAEI 590
Query: 536 VN 541
VN
Sbjct: 591 VN 592
>SB_8196| Best HMM Match : NGP1NT (HMM E-Value=0.89)
Length = 374
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 329 LLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDE-ITDRKTFLETIKEI 505
LL G+ + T + + R E Q LN+ S+ + L +IP + + + + +++E+
Sbjct: 298 LLSADGATLIKDKTAINMRRREHFSQLLNRPSSVDQSALDQIPQQLLIEELSDPPSMEEL 357
Query: 506 ASAIKKL 526
AIK++
Sbjct: 358 TKAIKQM 364
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = +2
Query: 302 DIPVNMNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKIL--SRIPDEITD- 472
D+P+ + L GSL + LN ++E + A KIL +R E +D
Sbjct: 252 DVPMWLKSLRLHKYGSLFSQLSYEEMLNLSDEYLESKGVTKGARNKILLSTRKLQERSDT 311
Query: 473 -RKTFLETIK--EIASAIKKLLDAVN-EVSTYTPGPG 571
+K E ++ ++ + +K+L VN + +TP PG
Sbjct: 312 LQKLEKEVLQNGKLQAVLKELQQIVNTPIKPFTPSPG 348
>SB_4186| Best HMM Match : ADK (HMM E-Value=0.094)
Length = 1053
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 310 RNICSPHDSCHQIIIKTRYCSLCFGES 230
RN+ P +CH++ ++RY S+ G S
Sbjct: 463 RNVSVPSSNCHELATESRYKSVWMGAS 489
>SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7)
Length = 350
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 401 FQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLL 529
++E+ K K ILS DE + RK+FL+T ++SA LL
Sbjct: 71 YKEIFKAFPDAKVILSVRDDEESWRKSFLKTESIVSSATSNLL 113
>SB_54637| Best HMM Match : DUF1621 (HMM E-Value=3)
Length = 265
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/68 (30%), Positives = 26/68 (38%)
Frame = +2
Query: 299 ADIPVNMNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRK 478
A+I + N L GSL DS C L + KK A L + + D K
Sbjct: 73 AEIVDDKNRGLFGRLGSLGDSPCARAHLLYCVHDIKLAKKKDAVLVSCENHKINRNKDHK 132
Query: 479 TFLETIKE 502
F E KE
Sbjct: 133 AFTEGCKE 140
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/83 (20%), Positives = 40/83 (48%)
Frame = +2
Query: 317 MNESLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETI 496
++E+ +Q + D + T + T+ E NK+ KK + + ++++ + ++
Sbjct: 227 VDETKREVQETKKDVQETKKEVQETKTKVDETNKEVQETKKEVHEVKGKVSEMAVDVASL 286
Query: 497 KEIASAIKKLLDAVNEVSTYTPG 565
KE S ++ +D ++ YT G
Sbjct: 287 KEEFSTVQDFIDYLH--LRYTTG 307
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 27.9 bits (59), Expect = 8.9
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Frame = +2
Query: 167 IRPVLTQLEKYDLAASQTLRAALTK---AEAAVPGLNYDLVAGIMRRADIPVNMNESLLR 337
++ + QLE A +R TK E ++ DL+ R AD + ++
Sbjct: 552 LKNTIAQLEDKINALDNDVREVNTKNDILEDQAKEMHDDLLEANKRAADAEDELQQTEDE 611
Query: 338 LQGSLTDSECTDLRLNRTEEAFQELNKKSAAL-KKILSRIPDEITDRKTFLETIKEIASA 514
L D + + R++ E AF +K+ L +++LS+ P +I ++ L+ ASA
Sbjct: 612 LNRLKNDIQEKEKRISELESAFDAADKEKRDLEQQVLSQTP-KIKRLESELQDALNRASA 670
Query: 515 IKKLLDAVN 541
+++ DA N
Sbjct: 671 LEE--DAKN 677
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 392 EEAFQELNKKS--AALKKIL-SRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTP 562
+ F +L+ S +AL + + + I DEITDR + L+ +K S++K++L +N + Y
Sbjct: 359 QREFTDLDPASGGSALSRYMDTTIGDEITDRMSMLQQLK---SSMKQIL-GINNMLVYKI 414
Query: 563 GPGKQVLEQRKREFVKYSKRFSTTLKEYFKEGQ*VFMSISYNLRS 697
K+ ++ E +Y F + + + SIS N S
Sbjct: 415 KWTKKGIDPTNDEHRQYLNTFCRDFQRVLETK--ITQSISENTSS 457
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,595,272
Number of Sequences: 59808
Number of extensions: 411665
Number of successful extensions: 1063
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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