Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30775
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 33 0.19
At5g40640.1 68418.m04933 expressed protein 32 0.45
At1g72250.1 68414.m08353 kinesin motor protein-related 31 0.59
At4g02440.1 68417.m00331 F-box family protein to circadian cloc... 30 1.4
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 30 1.8
At3g01435.1 68416.m00067 Expressed protein 29 2.4
At2g21240.2 68415.m02525 expressed protein 29 2.4
At2g21240.1 68415.m02524 expressed protein 29 2.4
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 29 3.1
At3g08020.1 68416.m00979 PHD finger protein-related contains low... 23 6.0
At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein co... 28 7.2
At3g50380.1 68416.m05511 expressed protein 28 7.2
At5g23760.1 68418.m02790 heavy-metal-associated domain-containin... 27 9.6
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear
division protein nuf2) (Swiss-Prot:Q10173)
[Schizosaccharomyces pombe]
Length = 974
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/93 (20%), Positives = 44/93 (47%)
Frame = +2
Query: 206 AASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLN 385
A Q +R T+ + + +DLV + A++ + +S +LQG+L + +
Sbjct: 207 ATFQKMREKSTQMDNEISKAEFDLVETVQENANLRSQIVQSPDKLQGALEEKKLVLGETK 266
Query: 386 RTEEAFQELNKKSAALKKILSRIPDEITDRKTF 484
+ E++ ++ AA+ ++ ++ + T K F
Sbjct: 267 KAEQSAMVTFQEKAAILEVFEKVTNAKTVEKEF 299
>At5g40640.1 68418.m04933 expressed protein
Length = 586
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 335 RLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASA 514
RL+ S+ +SE L R E ++ L K +SR P T R+ F+E +K++++
Sbjct: 476 RLKSSIVESESPPLTELRKAE-LDAFARRLQGLTKSVSRYP---TFRRHFVELVKKLSND 531
Query: 515 IKKLLDAVNEVSTYTPGPGKQV 580
+ + S P PGK V
Sbjct: 532 LDNKHNRFEGGSRSVPRPGKTV 553
>At1g72250.1 68414.m08353 kinesin motor protein-related
Length = 1195
Score = 31.5 bits (68), Expect = 0.59
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Frame = +2
Query: 209 ASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLNR 388
+ QT + +AE G+ D D+ + E L+L+ EC + LN
Sbjct: 331 SQQTQENLVCRAEEEAEGMRSDCEQQRKEMEDMKRMVEE--LKLENQQKTRECEEA-LNS 387
Query: 389 TEEAFQELNKKSAALKKI-LSRIPDEIT------DRKTFLETIK--EIASAIKKLLDAVN 541
E EL +KS + + S+ +++ D+K +E IK E A+ K L+ +N
Sbjct: 388 LSEIQNELMRKSMHVGSLGTSQREEQMVLFIKRFDKKIEVEQIKLLEEATTYKHLVQDIN 447
Query: 542 EVSTYTPGPGKQVLEQRKREFVKY 613
E S++ KQ E + VK+
Sbjct: 448 EFSSHIQSRVKQDAELHENLKVKF 471
>At4g02440.1 68417.m00331 F-box family protein to circadian clock
coupling factor ZGT (GP|14210079) {Nicotiana tabacum};
contains Pfam PF00646: F-box domain
Length = 336
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 496 QGNSLCHKKITGCCK*GIYIYSRSWEASIRTEEKRICKIFKAIFYYSQRIL*RRTVS 666
QGN L + G C +Y +W I EEKR +F+ +F +R RT++
Sbjct: 221 QGNKLLASRFRGDC-----LYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTIN 272
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Frame = +2
Query: 353 TDSECTDLR---------LNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEI 505
T++E TDL+ + + +E + ++ ++++ +S+ E+ K+ LET+KE
Sbjct: 364 TETEITDLKERIVTLETTVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELETVKEE 423
Query: 506 AS-AIKKLLDAVNEVSTYTPGPGKQV--LEQRKREFVKYSK---RFSTTLKEYFKEGQ 661
+ A+KK DA + V + K + LE K E K K ++ L E EG+
Sbjct: 424 KNRALKKEQDATSRVQRLSEEKSKLLSDLESSKEEEEKSKKAMESLASALHEVSSEGR 481
>At3g01435.1 68416.m00067 Expressed protein
Length = 115
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 473 RKTFLETIKEIASAIKKLLD---AVNEVSTYTPGPGKQVLEQRKREFVKYSKRFSTTLKE 643
+ T L+ ++ + + + K+L+ V E GP K+ + REF++ K TL+E
Sbjct: 6 QNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQVTLRE 65
Query: 644 YFK 652
K
Sbjct: 66 EIK 68
>At2g21240.2 68415.m02525 expressed protein
Length = 296
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 443 LSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQ 577
LS IP E+T+ K + KE + K+ +++ P PGK+
Sbjct: 137 LSTIPPEVTNTKVVNKRKKENKQGLSKVKKVGEDLNRRVPAPGKK 181
>At2g21240.1 68415.m02524 expressed protein
Length = 296
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 443 LSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQ 577
LS IP E+T+ K + KE + K+ +++ P PGK+
Sbjct: 137 LSTIPPEVTNTKVVNKRKKENKQGLSKVKKVGEDLNRRVPAPGKK 181
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 29.1 bits (62), Expect = 3.1
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Frame = +2
Query: 227 AALTKAEAAVPGLNYDL--VAGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLNRTEEA 400
A L + V GL L + +++ AD N E R++ L D + + E+
Sbjct: 22 ARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNETE---RVRNFLEDVKDIVYDADDIIES 78
Query: 401 F--QELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNE--VSTYTPGP 568
F EL K +KK + + + DR+ F I+ I I +++ + + G
Sbjct: 79 FLLNELRGKEKGIKKQVRTLACFLVDRRKFASDIEGITKRISEVIVGMQSLGIQHIADGG 138
Query: 569 GKQV-LEQRKRE 601
G+ + L++R+RE
Sbjct: 139 GRSLSLQERQRE 150
>At3g08020.1 68416.m00979 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 764
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 289 DSCHQIIIKTRYCSLC 242
D+C ++ +K YC +C
Sbjct: 274 DACGRLFVKGNYCPVC 289
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 124 HCHCDSLNISIYLR 83
HCHCD ++ Y++
Sbjct: 312 HCHCDGISDDKYMQ 325
>At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 434 KKILSRIPDEITDRKTFL-ETIKEIASAIKKLLDAVNEVSTYTPGPGKQV--LEQRKREF 604
+++ S + +E+T ++ L ET I ++ ++ S+ TP PG V L + +
Sbjct: 407 EELRSELRNEVTSARSRLGETAIHIFCDLEH---SIKSDSSKTPVPGGAVHPLTRYTMNY 463
Query: 605 VKYSKRFSTTLKEYFK 652
+KYS + TL++ FK
Sbjct: 464 LKYSCEYKDTLEQVFK 479
>At3g50380.1 68416.m05511 expressed protein
Length = 3071
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 182 TQLEKYDLAASQTLRAALTKAEAAVPGLNYDLVAGIMRRADI-PVNMNESLLRLQGSLTD 358
T +E++ + T+++ T P + Y V +A PVN + + +LQ D
Sbjct: 2071 TSMERHSIGKHATIQSGKTIDFYVNPDMIYFRVTLTTSQASCKPVNSGQWVKKLQKQKND 2130
Query: 359 SECTDLRLN 385
++C D+ L+
Sbjct: 2131 AQCLDVDLD 2139
>At5g23760.1 68418.m02790 heavy-metal-associated domain-containing
protein Pfam profile PF00403: Heavy-metal-associated
domain
Length = 103
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +2
Query: 380 LNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYT 559
L T++ ++ ++AA + I ++ D+K + + + + +KKL V +V +
Sbjct: 10 LTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKL-KKVGKVDLIS 68
Query: 560 PGPGKQVLEQRKREFVKYSKR 622
GP K+ ++ K+E K K+
Sbjct: 69 VGPAKEEKKEEKKEEKKEEKK 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,306
Number of Sequences: 28952
Number of extensions: 295048
Number of successful extensions: 754
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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