Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30770
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 238 1e-61
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 203 4e-51
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 195 7e-49
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 195 7e-49
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 194 2e-48
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 148 1e-34
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 136 5e-31
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 115 1e-24
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 112 7e-24
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 109 6e-23
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 108 1e-22
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 107 3e-22
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 104 2e-21
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 103 3e-21
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 103 5e-21
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 103 5e-21
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 101 2e-20
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 100 3e-20
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 99 9e-20
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 98 2e-19
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 96 8e-19
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 95 2e-18
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 95 2e-18
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 94 3e-18
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 85 2e-15
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 83 6e-15
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 83 6e-15
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 81 3e-14
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 80 6e-14
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 66 6e-10
UniRef50_A7QT97 Cluster: Chromosome chr1 scaffold_166, whole gen... 65 1e-09
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 63 7e-09
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 62 9e-09
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 62 1e-08
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 59 1e-07
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 58 3e-07
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 46 9e-04
UniRef50_Q0UH49 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 41 0.025
UniRef50_Q9A9N1 Cluster: Oxidoreductase, GMC family; n=3; Alphap... 34 2.9
UniRef50_Q3JN61 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_A4AKC6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A3V382 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_Q8ILS9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q4UIX9 Cluster: Ubiquitin-fusion degradation pathway co... 34 3.8
UniRef50_A4RSV8 Cluster: Polyketide synthase; n=1; Ostreococcus ... 33 5.0
UniRef50_A7DRT5 Cluster: Glycosyl transferase, family 2; n=1; Ca... 33 5.0
UniRef50_Q8FCY4 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_Q2GYE3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q2IWT3 Cluster: AMP-dependent synthetase and ligase; n=... 33 8.8
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 238 bits (582), Expect = 1e-61
Identities = 111/111 (100%), Positives = 111/111 (100%)
Frame = +3
Query: 258 MASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGK 437
MASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGK
Sbjct: 1 MASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGK 60
Query: 438 EMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQKA 590
EMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQKA
Sbjct: 61 EMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQKA 111
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 203 bits (495), Expect = 4e-51
Identities = 96/135 (71%), Positives = 110/135 (81%)
Frame = +3
Query: 180 QPAASIKPIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVL 359
Q ++P+ +S L T I SL +MHRTGPHIK+RK R PL+G PF KGVVL
Sbjct: 24 QKNGHLEPLCDITSRLGGLT--IQERCVSLYRMHRTGPHIKERKPRRPLDGKPFMKGVVL 81
Query: 360 KTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKL 539
KT+IKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHN+VL RVGR++DCPGVK+
Sbjct: 82 KTLIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNIVLCRVGRVQDCPGVKI 141
Query: 540 KCVRGKHDLSHVIKQ 584
KCVRGK+DL HVIK+
Sbjct: 142 KCVRGKYDLGHVIKK 156
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 195 bits (476), Expect = 7e-49
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 42 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 101
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 102 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 152
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 195 bits (476), Expect = 7e-49
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 194 bits (472), Expect = 2e-48
Identities = 93/138 (67%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
Frame = +3
Query: 183 PAASIKPIVPSSSFL-TAQTGLIT-RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVV 356
PAA+ + + +L + GL R +L +MH GP IKKRKS+NP NG PFAKGVV
Sbjct: 36 PAANGSILAEARKYLENSMLGLQQIREKNTLLKMHERGPIIKKRKSKNPFNGAPFAKGVV 95
Query: 357 LKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVK 536
LKT+IKKPKKPNSANRKCVLVRLSNGKEM AYIPGIGHNLQEHN+VL RVGR +D PGVK
Sbjct: 96 LKTLIKKPKKPNSANRKCVLVRLSNGKEMTAYIPGIGHNLQEHNIVLCRVGRCRDVPGVK 155
Query: 537 LKCVRGKHDLSHVIKQKA 590
+KCVRGK+DL+HV+K ++
Sbjct: 156 IKCVRGKYDLAHVVKNRS 173
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 148 bits (359), Expect = 1e-34
Identities = 71/113 (62%), Positives = 84/113 (74%)
Frame = +3
Query: 249 TRAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLS 428
+ +MA+L QMHR G P G P KGVVLKT+I+KPKKPNSANRKC VRLS
Sbjct: 38 SHSMATLNQMHRAGKPKPDPPQLGPTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRLS 97
Query: 429 NGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQK 587
NGKE++ +IPG GHNLQEHN+VLV GR +D PGVKLK VRGK+D +HV K+K
Sbjct: 98 NGKEVICFIPGEGHNLQEHNIVLVEGGRTQDLPGVKLKIVRGKYDCAHVKKKK 150
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 136 bits (329), Expect = 5e-31
Identities = 66/112 (58%), Positives = 77/112 (68%)
Frame = +3
Query: 249 TRAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLS 428
T +MA+L QMHR GP + + P G P KGVVL T +KPKKPNSANRKC VRLS
Sbjct: 27 TCSMATLNQMHRLGPPKRPPRKLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRLS 86
Query: 429 NGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
G+E V +IPG GH LQEH +VLV GR +D PGVKL VRGK+D HV K+
Sbjct: 87 TGREAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQKK 138
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 115 bits (276), Expect = 1e-24
Identities = 58/102 (56%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Frame = +3
Query: 273 QMHRTGPHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVA 449
Q ++ +K R +++P L N F +GV+L+ +I KPKKPNSA RKC VRLSNGK + A
Sbjct: 65 QFYKHYDPVKIRPTQSPDLENNCFKRGVILRIMILKPKKPNSALRKCARVRLSNGKVISA 124
Query: 450 YIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHV 575
IPG GHNLQEH+VVLVR GR++D PGVK VRG +DL+ V
Sbjct: 125 LIPGEGHNLQEHHVVLVRGGRVQDVPGVKYHLVRGAYDLAGV 166
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 112 bits (270), Expect = 7e-24
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Frame = +3
Query: 279 HRTGPHIKKRKSRNP--LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 452
+R GP ++ +S++ ++G KG+VLKTVI+ PKKPNS NRKC +VRLS G E+ AY
Sbjct: 53 YRNGPPKRRARSKDKSAISGYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRLSTGAEVCAY 112
Query: 453 IPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHD 563
IP +GHNLQEH+ VLV+ GR +D VK VRGK+D
Sbjct: 113 IPNVGHNLQEHSQVLVKGGRRRDLISVKANIVRGKYD 149
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 109 bits (262), Expect = 6e-23
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +3
Query: 258 MASLAQMHRTGPHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNG 434
M + Q+ + G +K+KS+ P L G P +GV ++ PKKPNSA RK VRLSNG
Sbjct: 1 MPTFNQLVKYGREKRKKKSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRLSNG 60
Query: 435 KEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHV 575
E+ AYIPG GHNLQEH++VLVR GR+KD PGV+ K +RG D + V
Sbjct: 61 IEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYKIIRGALDAAGV 107
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 108 bits (260), Expect = 1e-22
Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Frame = +3
Query: 249 TRAMASLAQMHR-TGPHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVR 422
T A+L Q+ R +GP +K+ S P L+ P KGVVL+ ++ KPKKPNSA RK VR
Sbjct: 25 TTMQATLNQIKRGSGPPRRKKISTAPQLDQCPQRKGVVLRVMVLKPKKPNSAQRKACRVR 84
Query: 423 LSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
L+NG + AYIPG GH+ QEH++V VR GR +D PGVK +RG DLS V+ +
Sbjct: 85 LTNGNVVSAYIPGEGHDAQEHSIVYVRGGRCQDLPGVKYHVIRGAGDLSGVVNR 138
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 107 bits (257), Expect = 3e-22
Identities = 51/92 (55%), Positives = 62/92 (67%)
Frame = +3
Query: 300 KKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQ 479
K K L G+PF +GV + KPKKPNSA RK VRLS G+ + AYIPGIGHN Q
Sbjct: 37 KTNKQSVALEGSPFRRGVCTRVFTVKPKKPNSAVRKVARVRLSTGRSVTAYIPGIGHNAQ 96
Query: 480 EHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHV 575
EH VVL+R GR +DCPGV+ VRG +D++ V
Sbjct: 97 EHAVVLLRGGRAQDCPGVQYHVVRGVYDIAGV 128
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 104 bits (250), Expect = 2e-21
Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +3
Query: 201 PIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGN-PFAKGVVLKTVIKK 377
P+ +++F Q+ A++ Q+ R G K R R G P +GV L+ +
Sbjct: 49 PVAAAAAFRLPQSS----GFATMNQLIRHGREEKHRSDRKRALGKCPQKQGVCLRVSTRT 104
Query: 378 PKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGK 557
PKKPNSA K VRLSN ++ AYIPG GHNLQEH++VLVR GR+KD PGVK C+RG
Sbjct: 105 PKKPNSALGKIAKVRLSNRNDVFAYIPGEGHNLQEHSMVLVRGGRVKDLPGVKFHCIRGV 164
Query: 558 HDL 566
DL
Sbjct: 165 KDL 167
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 103 bits (248), Expect = 3e-21
Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +3
Query: 258 MASLAQMHRTGPHIKKRKSRN-PLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNG 434
M + Q+ R G K+R R L+ P GV L+ + PKKPNSA RK VRLSN
Sbjct: 1 MPTFNQLIRHGREEKRRTDRTRALDKCPQKTGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60
Query: 435 KEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDL 566
++ AYIPG GHNLQEH+ VL+R GR+KD PGVK C+RG DL
Sbjct: 61 HDIFAYIPGEGHNLQEHSTVLIRGGRVKDLPGVKFHCIRGVKDL 104
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 103 bits (246), Expect = 5e-21
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +3
Query: 336 PFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRL 515
P KGV +K I+KPKKPNSA RKC L++LSNGK + AYIPG LQEH VV+ GR+
Sbjct: 33 PQRKGVCVKVFIRKPKKPNSAQRKCALLKLSNGKTISAYIPGERGQLQEHGVVIFEGGRV 92
Query: 516 KDCPGVKLKCVRGKHDLS 569
+DCPG+K K +RGK D++
Sbjct: 93 QDCPGIKYKIIRGKLDMN 110
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 103 bits (246), Expect = 5e-21
Identities = 58/110 (52%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +3
Query: 249 TRAMASLAQMHRTGPHIKKRKSRNPLNGNPFAK-GVVLKTVIKKPKKPNSANRKCVLVRL 425
+R A++ Q+ R KRKS PL F K V K KP+KPNSA RK V+L
Sbjct: 49 SRCEATINQIMRGARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL 108
Query: 426 SNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHV 575
SNG+ AYIPG GHNLQEH+VVLVR G KD PGV+ K VRG DL+ V
Sbjct: 109 SNGQMTTAYIPGEGHNLQEHSVVLVRGGGAKDLPGVRYKIVRGTMDLNGV 158
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 101 bits (242), Expect = 2e-20
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +3
Query: 261 ASLAQMHRTGPHIKK-RKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNG 434
A+L Q+ R K+ RK+ +P L G P KGV LKT I KPKKPNS RK +RL+NG
Sbjct: 80 ATLNQVRRGCRKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRLTNG 139
Query: 435 KEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKC 545
+ YIPG GHN+Q+H+VVL+R GR +DCPGV+ C
Sbjct: 140 AVVTGYIPGEGHNIQQHSVVLIRGGRAQDCPGVRYIC 176
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 100 bits (240), Expect = 3e-20
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +3
Query: 258 MASLAQMHRTGPHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNG 434
M ++ Q+ R+ +K+++P L P +G+ L+ PKKPNSA RK VRL+ G
Sbjct: 1 MPTIQQLIRSARKKITKKTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRLTTG 60
Query: 435 KEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHV 575
E+ AYIPG+GHNLQEH VVLVR GR+KD PGV+ VRG D + V
Sbjct: 61 FEVTAYIPGVGHNLQEHAVVLVRGGRVKDLPGVRYHIVRGSLDTAGV 107
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 99.1 bits (236), Expect = 9e-20
Identities = 46/98 (46%), Positives = 64/98 (65%)
Frame = +3
Query: 297 IKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNL 476
IKK+K P KG+ +K + PKKPNSA RK ++L N KE++AYIPG GH L
Sbjct: 13 IKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKLKNKKEILAYIPGEGHAL 72
Query: 477 QEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQKA 590
Q+HN VL++ GR++D PG+K K +RG D V+ +K+
Sbjct: 73 QDHNFVLIKKGRVQDLPGIKYKVIRGVLDTIGVLNRKS 110
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/97 (49%), Positives = 62/97 (63%)
Frame = +3
Query: 297 IKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNL 476
+KK K N PF +G ++ + PKKPNSA RK VRLSN ++ IPG GHNL
Sbjct: 18 VKKNKVPALANHGPFRRGTCVRVFTRTPKKPNSALRKVAKVRLSNKTTVIVAIPGEGHNL 77
Query: 477 QEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQK 587
+EH ++L R GR++D PGVK K VRG DL+ V K+K
Sbjct: 78 KEHAIILFRGGRVRDLPGVKYKAVRGVLDLAGVQKRK 114
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 95.9 bits (228), Expect = 8e-19
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +3
Query: 354 VLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGV 533
VL+ I KPKKPNS RK VRLS GK + AYIPG GHN+Q+H+VVLVR GR +DCPGV
Sbjct: 47 VLRVGITKPKKPNSGERKTARVRLSTGKVITAYIPGEGHNIQQHSVVLVRGGRSQDCPGV 106
Query: 534 KLKCVRGKHDLSHV 575
+ VRG DL V
Sbjct: 107 RYHLVRGALDLGGV 120
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 94.7 bits (225), Expect = 2e-18
Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +3
Query: 291 PHIKKRKSRN--PLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGI 464
P KK + N L G P KGV +K I KPKKPNSA RK +RLS + ++AYIPG
Sbjct: 11 PRRKKMHTNNVKALEGCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRLSTRRMIIAYIPGQ 70
Query: 465 GHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLS 569
GHNLQE++ VLV GR D PGV+ ++GK+D S
Sbjct: 71 GHNLQEYSSVLVSGGRAPDLPGVRYTLIKGKYDFS 105
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 94.7 bits (225), Expect = 2e-18
Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +3
Query: 258 MASLAQMHRTGPHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNG 434
M + Q+ R G K RK+++P L NPF GV L PKKPNSA RK VRLSN
Sbjct: 1 MPTYNQLVRFGRKSKTRKTKSPALESNPFKSGVCLVVKTVTPKKPNSALRKIATVRLSNK 60
Query: 435 KEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQK 587
+ + AYIPG H+++EH+ VLVR G++ D PGVK V G +D++ V +K
Sbjct: 61 RTVNAYIPGEKHSVKEHDRVLVRGGQVPDLPGVKYHIVLGAYDIAGVKGRK 111
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 93.9 bits (223), Expect = 3e-18
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 336 PFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRL 515
P KG+ +K PKKPNSA RK V L+NGK ++ YI G GH LQEH++VLVR GR+
Sbjct: 28 PQKKGICMKVYTTSPKKPNSAERKVAKVNLTNGKSIIGYISGEGHTLQEHSLVLVRGGRV 87
Query: 516 KDCPGVKLKCVRGKHDLSHVIKQK 587
KD PGV+ VRG +DL V +K
Sbjct: 88 KDLPGVQYHFVRGVYDLHAVGTRK 111
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Frame = +3
Query: 249 TRAMASLAQMHRTGPHIKKRKSRNPLNGN-----PFAKGVVLKTVIKKPKKPNSANRKCV 413
TR + +L HR P + + R G P +GV L+ + PKKPNSA RK
Sbjct: 27 TRLLLTLED-HRKKPGTRACRERRTRGGRASDQCPQKQGVCLRVSTRTPKKPNSALRKIA 85
Query: 414 LVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKL 539
VRLSN ++ A+IPG GHN QEH++VLVR GR+KD PG +L
Sbjct: 86 KVRLSNRHDIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGKRL 127
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +3
Query: 291 PHIKKRKSRNP-LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIG 467
P K + R+ L G P KGV + + P+KPNS RK VRLS G+ + ++PG G
Sbjct: 113 PRYKPKNRRSCWLEGCPQKKGVCVTIRVVTPRKPNSGLRKVARVRLSTGRTVTCHVPGEG 172
Query: 468 HNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDL 566
HNL H+VVLVR GR +D G K VR K+DL
Sbjct: 173 HNLHTHSVVLVRGGRCQDVSGCHYKVVRSKYDL 205
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 336 PFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRL 515
P +G VLK I PKKPNSA R +L+N K +VA+IPG GHNL++H+ +LVR G
Sbjct: 28 PQKEGSVLKPRIVTPKKPNSARRPVAKAKLTNKKFVVAHIPGTGHNLRKHSTILVRGGGC 87
Query: 516 KDCPGVKLKCVRGKHD 563
+D PGV+ C+RG D
Sbjct: 88 RDLPGVRHTCIRGVSD 103
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Frame = +3
Query: 291 PHIKKR---KSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVR-LSNGKEMVAYIP 458
P KK K+ LN NP K + LK + PKKPNSANR+ V+ L + IP
Sbjct: 11 PRFKKSIASKAGKKLNSNPQRKVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP 70
Query: 459 GIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQKA 590
G HNLQ+H+ VL+ GR KD GV LK VRGK DL V +K+
Sbjct: 71 GEKHNLQQHSTVLICGGRSKDLIGVHLKAVRGKFDLLGVNGRKS 114
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = +3
Query: 366 VIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKC 545
++ PKK NSA RK VRL++G E+ YIPGIGHN QEH VVLVR GR+KD P V+
Sbjct: 171 LLSPPKKSNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGRVKDLPNVRYHI 230
Query: 546 VRGKHD 563
VRG D
Sbjct: 231 VRGTLD 236
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +3
Query: 300 KKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQ 479
+ +K LN NP +G + + PKKPNSA RK ++ L N K++ AYIPG ++
Sbjct: 13 QNKKKITVLNHNPQLEGFLCSIISMSPKKPNSAKRKVGIIELKNNKKIKAYIPGERSVVR 72
Query: 480 EHNVVLVRVGRLKDCPGVKLKCV 548
+ VL+R G +D PGV K V
Sbjct: 73 DKTRVLIRGGNTRDLPGVNHKIV 95
>UniRef50_A7QT97 Cluster: Chromosome chr1 scaffold_166, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr1 scaffold_166, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 88
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +3
Query: 378 PKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGK 557
PKK N A K V +RL + ++AYIP IGHNLQEH+VVLVR R+K+ GV+ ++G
Sbjct: 24 PKKLNFALHKIVKIRLISEFAIIAYIPDIGHNLQEHSVVLVRGERVKNLLGVRYHIIQGT 83
Query: 558 H 560
H
Sbjct: 84 H 84
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 62.9 bits (146), Expect = 7e-09
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
Frame = +3
Query: 318 NPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GIGHNLQEHN 488
+PL G P A+G+VL+ V + +KPN+A RKCV V+L NGK + A++P G + + EH+
Sbjct: 42 DPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHD 101
Query: 489 -VVLVRVG-----RLKDCPGVKLKCVR 551
VV+ R+G L D PGV+ K ++
Sbjct: 102 EVVIERIGGPEGRSLGDIPGVRFKVIK 128
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 62.5 bits (145), Expect = 9e-09
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = +3
Query: 297 IKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNL 476
IKK SR LN NP K ++ PKKPNSA RK + L N K ++AY+PG +
Sbjct: 16 IKKTPSR-ALNKNPQKKCKCNAFIVMSPKKPNSAVRKVIKTTL-NKKTVLAYVPGENVII 73
Query: 477 QEHNVVLVRVGRLKDCPGVKLKCVRGKHDL 566
+++ VL++ G + D PGVK K + G D+
Sbjct: 74 PKNSRVLIKGGNVPDLPGVKYKVILGVLDV 103
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 62.1 bits (144), Expect = 1e-08
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Frame = +3
Query: 294 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 467
H+ NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 HLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGC 90
Query: 468 -HNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 551
+ ++E++ VLV GR + D PGV+ K V+
Sbjct: 91 LNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Frame = +3
Query: 318 NPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG--HNLQEHN 488
+P G+ AKG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G + + E++
Sbjct: 41 SPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDEND 100
Query: 489 VVLV----RVGRLK-DCPGVKLKCVR 551
VL+ R G+ K D PGV+ K V+
Sbjct: 101 EVLLAGFGRKGKAKGDIPGVRFKVVK 126
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Frame = +3
Query: 318 NPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG--HNLQEHN 488
+PL G P AKG+VL+ V + K+PNSA RKC+ ++L NG+++ A+ PG G + + EH+
Sbjct: 37 DPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDEHD 96
Query: 489 VVLVR------VGRLKDCPGVKLK 542
V + G D PGV+ +
Sbjct: 97 EVTIEGIGGRMGGSYGDIPGVRFR 120
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 315 RNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 467
+ P G+ AKG+VL+ + + K+PNSA KC V+L NGK++ A++P G
Sbjct: 108 KKPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDG 159
>UniRef50_Q0UH49 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 132
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 468 HNLQEHNVVLVRVGRLKDCPGVK 536
HN+Q+H+VV+VR GR +DCPGVK
Sbjct: 85 HNVQQHSVVMVRGGRAQDCPGVK 107
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 309 KSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCV 413
K +PL G P A+G+VL+ V + +KPN+A RKCV
Sbjct: 39 KKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCV 73
>UniRef50_Q9A9N1 Cluster: Oxidoreductase, GMC family; n=3;
Alphaproteobacteria|Rep: Oxidoreductase, GMC family -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 555
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 429 NGKEMVAYIPGIGHNLQEHNVVLVRVGRLK 518
+G E+VA +PG+G NLQ+H +V R RLK
Sbjct: 288 HGIEVVADLPGVGENLQDHYIVAARY-RLK 316
>UniRef50_Q3JN61 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 758
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 407 MRSGKIVKRQGNGGVYTRHRT*LAGTQRGPGKSGKVKRLSRRETKVCARQ-ARPVTRHQT 583
+RSG +R G+G + R L G++R G+ G+ +R R ++ R AR H
Sbjct: 13 LRSGLRGRRGGSGAGRSGRRLCLGGSRRRRGRGGRSRRRGERGRRLVERDLARVEHDHAR 72
Query: 584 EGVG*EGHARNDH 622
G G R+DH
Sbjct: 73 RGRDRLGTMRDDH 85
>UniRef50_A4AKC6 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 94
Score = 33.9 bits (74), Expect = 3.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 522 NLLTFPLLPGPRCVPASY-VRCRVYTPPFPCRLTILPERIYGSRSSAS*VFLLRSL 358
+L+ FP L RC A VR V TPP P +T+L R+ R +A+ + + +L
Sbjct: 5 HLVPFPDLEPGRCARARLTVRPAVLTPPHPGTITVLRARLSSDRGAATAEYAITTL 60
>UniRef50_A3V382 Cluster: Putative uncharacterized protein; n=2;
Rhodobacteraceae|Rep: Putative uncharacterized protein -
Loktanella vestfoldensis SKA53
Length = 198
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -3
Query: 533 HAGTIF*PSHSYQDHVVFLQVMSDAGYIRHHFLAV*QSYQNAFTVRGVRLL 381
H G +F + + QD VFL+V++ G +R H AV Q++ F VR L
Sbjct: 36 HTGKVFYTAATDQDDRVFLKVVAFTGDVRDHLKAVGQTHFGDFPHSRVRFL 86
>UniRef50_Q8ILS9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3026
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 107 ESYKKRNVAPISRLQDTVHNSQSNSTGGFNKTNRAIVQFSNSPNWPHH 250
E YK +NV+ I+R +T+ NS N+T N I ++ + N H+
Sbjct: 249 EEYKNKNVSVINRKDNTIQNSDINNTQNILHRNEDIEEYKLNENDIHN 296
>UniRef50_Q4UIX9 Cluster: Ubiquitin-fusion degradation pathway
component, UFD1 homologue, putative; n=2; Theileria|Rep:
Ubiquitin-fusion degradation pathway component, UFD1
homologue, putative - Theileria annulata
Length = 321
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 474 LQEHNVVLVRVGRLKDCPGVKLKCV-RGKHDLSHVIK 581
L+ +++VLV +L DC V+LKC+ +G +DL +V K
Sbjct: 228 LKPYDIVLVEPVKLSDCTNVELKCLEKGFYDLKNVKK 264
>UniRef50_A4RSV8 Cluster: Polyketide synthase; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Polyketide synthase -
Ostreococcus lucimarinus CCE9901
Length = 4526
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 165 TLRAIQPAAS-IKPIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGNPF 341
TL ++P A +P + L A L RA+ASL + + PH++ RN +P
Sbjct: 1798 TLEGVKPRAGHCEPGAGAVGLLFAMANLTERAVASLVHLRQLNPHVEAATRRNA--PSPH 1855
Query: 342 AKGVVL 359
A+ VL
Sbjct: 1856 ARAPVL 1861
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 165 TLRAIQPAAS-IKPIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGNPF 341
TL ++P A +P + L A L RA+ASL + + PH++ RN +P
Sbjct: 3174 TLEGVKPRAGHCEPGAGAVGLLFAMANLTERAVASLVHLRQLNPHVEAATRRNA--PSPH 3231
Query: 342 AKGVVL 359
A+ VL
Sbjct: 3232 ARAPVL 3237
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 165 TLRAIQPAAS-IKPIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGNPF 341
TL ++P A +P + L A L RA+ASL + + PH++ RN +P
Sbjct: 3887 TLEGVKPRAGHCEPGAGAVGLLFAMANLTERAVASLVHLRQLNPHVEAATRRNA--PSPH 3944
Query: 342 AKGVVL 359
A+ VL
Sbjct: 3945 ARAPVL 3950
>UniRef50_A7DRT5 Cluster: Glycosyl transferase, family 2; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Glycosyl
transferase, family 2 - Candidatus Nitrosopumilus
maritimus SCM1
Length = 688
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 439 SLPFDNLTRTHLRFAEFGFLGFFITVFRTTPL 344
+LPF +T L F +G LG FI++F P+
Sbjct: 427 NLPFSQVTLLELFFGVYGILGIFISIFSNNPI 458
>UniRef50_Q8FCY4 Cluster: Putative uncharacterized protein; n=3;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli O6
Length = 153
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 521 IF*PSHSYQDHVVFLQVMSDAGYIRHHFLAV*QSYQNAFTVRGVRLLR 378
+F + + QDH V LQV++ + HF V Q+ FT RGVR R
Sbjct: 65 VFNTTTTDQDHGVLLQVVTFTTDVGSHFETVSQTNTAYFTQRGVRFFR 112
>UniRef50_Q2GYE3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 915
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 165 TLRAIQPAASIKPIVPSSSFLTAQTGLITRAMASLAQMHRTGPHIKKRKSRNPLNGNPFA 344
T A++PA P+VP+ L + TRA AS+ + T P + K + NP A
Sbjct: 334 TPTAVKPAVPAVPVVPAVPTLPKASPKETRATASVEKSAETTPAVTKPDEQQTKPVNPSA 393
Query: 345 KGV 353
+ V
Sbjct: 394 ENV 396
>UniRef50_Q2IWT3 Cluster: AMP-dependent synthetase and ligase; n=3;
Rhodopseudomonas palustris|Rep: AMP-dependent synthetase
and ligase - Rhodopseudomonas palustris (strain HaA2)
Length = 521
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1
Query: 427 DNLTRTHLRFAEFGFLGFFITVFRTTPLAKGFPLS 323
DNL T+ F E +G FIT+FRT LAKG LS
Sbjct: 30 DNLRWTYREFGEA--VGRFITLFRTVGLAKGSALS 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,946,646
Number of Sequences: 1657284
Number of extensions: 14366603
Number of successful extensions: 37617
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 36290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37594
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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