Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30770
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.4  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.6  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 454 YPASDITCRNTTWS 495
           YPA++I+C    WS
Sbjct: 166 YPANEISCPQVQWS 179


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 477 QEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQK 587
           +EH  VLVR+ R +D   VKL  +    +L  V+ ++
Sbjct: 37  KEHCYVLVRLARFRD--SVKLSKIPNNVNLMDVVARE 71


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 128 HSSSYKIHLYLIIVFYTVLIV 66
           H+S Y +HL L I    +L+V
Sbjct: 247 HNSLYSLHLLLWITVTFILLV 267


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 468 HNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVI 578
           HN  EH + L       +CP V+L  +     ++ VI
Sbjct: 361 HNTIEHLLPLFLTQLKDECPEVRLNIISNLDCVNEVI 397


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 546 HTLVSRRDNLLTFPLLPGPRCVP 478
           H +V    N +    +PGP CVP
Sbjct: 317 HAIVQSLVNSMKPKEVPGPCCVP 339


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 98   LIIVFYTVLIVILQPNIMIF 39
            L+ VF+  LI+++Q   M+F
Sbjct: 1328 LVFVFFFALILVIQFVAMLF 1347


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 98   LIIVFYTVLIVILQPNIMIF 39
            L+ VF+  LI+++Q   M+F
Sbjct: 1328 LVFVFFFALILVIQFVAMLF 1347


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 98   LIIVFYTVLIVILQPNIMIF 39
            L+ VF+  LI+++Q   M+F
Sbjct: 1328 LVFVFFFALILVIQFVAMLF 1347


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 98   LIIVFYTVLIVILQPNIMIF 39
            L+ VF+  LI+++Q   M+F
Sbjct: 1328 LVFVFFFALILVIQFVAMLF 1347


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 116 YKIHLYLIIVFYTV 75
           ++IH Y ++ FY V
Sbjct: 24  HRIHSYFMVAFYVV 37


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 116 YKIHLYLIIVFYTV 75
           ++IH Y ++ FY V
Sbjct: 24  HRIHSYFMVAFYVV 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,326
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)