Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30770
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   1.3  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   1.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.7  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 238 LASSRGQWRLWPRCTEPDLTLKRGNLGIRLTGI 336
           L   R  +  WP   E DL   RGN  + L G+
Sbjct: 196 LLPKRNAYGTWPASGEMDLMESRGNENLYLDGV 228


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 238 LASSRGQWRLWPRCTEPDLTLKRGNLGIRLTGI 336
           L   R  +  WP   E DL   RGN  + L G+
Sbjct: 196 LLPKRNAYGTWPASGEMDLMESRGNENLYLDGV 228


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 329  RESLR*GCRSKDRNKKT*EAELREP*MRSGKIVKRQGNGGVYTRHRT*LAGTQRGPGKSG 508
            R   R G  S+ R++    +  R    +  +   R G+GG  +R R+       G  KSG
Sbjct: 1086 RAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSG 1145

Query: 509  KVKR 520
               R
Sbjct: 1146 SRSR 1149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,747
Number of Sequences: 2352
Number of extensions: 14946
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)