Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30770
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 195 4e-50
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 195 4e-50
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 195 4e-50
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 195 4e-50
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 195 4e-50
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 192 3e-49
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 64 2e-10
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 64 2e-10
M97196-3|AAA28394.1| 253|Drosophila melanogaster DNA-binding pr... 31 2.0
AE014134-790|AAO41151.1| 514|Drosophila melanogaster CG11924-PD... 31 2.0
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 195 bits (476), Expect = 4e-50
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 195 bits (476), Expect = 4e-50
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 195 bits (476), Expect = 4e-50
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 195 bits (476), Expect = 4e-50
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 42 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 101
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 102 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 152
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 195 bits (476), Expect = 4e-50
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVRLS
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 192 bits (469), Expect = 3e-49
Identities = 89/111 (80%), Positives = 98/111 (88%)
Frame = +3
Query: 252 RAMASLAQMHRTGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSN 431
R MASL QMHR+GPHIK R R PL+G PFAKGVVLKT+IKKPKKPNSANRKCVLVR S
Sbjct: 28 RGMASLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRHST 87
Query: 432 GKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQ 584
GKEMVAYIPGIGHNLQEHN+VL RVGRL+D PGVKLK VRG +DL+HV+K+
Sbjct: 88 GKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKK 138
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 63.7 bits (148), Expect = 2e-10
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Frame = +3
Query: 294 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 467
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 HLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGS 90
Query: 468 -HNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 551
+ ++E++ VLV GR + D PGV+ K V+
Sbjct: 91 LNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 63.7 bits (148), Expect = 2e-10
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Frame = +3
Query: 294 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 467
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 HLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGS 90
Query: 468 -HNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 551
+ ++E++ VLV GR + D PGV+ K V+
Sbjct: 91 LNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>M97196-3|AAA28394.1| 253|Drosophila melanogaster DNA-binding
protein isoform III protein.
Length = 253
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 284 SVHLGQRRHCPRDEASLGC*KTGRW 210
++H QR HC D+A+ K GRW
Sbjct: 172 ALHAAQRPHCAHDQAASALGKAGRW 196
>AE014134-790|AAO41151.1| 514|Drosophila melanogaster CG11924-PD,
isoform D protein.
Length = 514
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 284 SVHLGQRRHCPRDEASLGC*KTGRW 210
++H QR HC D+A+ K GRW
Sbjct: 433 ALHAAQRPHCAHDQAASALGKAGRW 457
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,071,691
Number of Sequences: 53049
Number of extensions: 683885
Number of successful extensions: 1694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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