Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30767
(821 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 175 3e-44
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 175 3e-44
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 159 3e-39
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 63 2e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 60 1e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 59 4e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 59 4e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 59 4e-09
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 59 4e-09
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 58 7e-09
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 58 7e-09
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 58 9e-09
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 56 2e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 56 2e-08
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 3e-08
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 56 4e-08
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 56 4e-08
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 54 2e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 53 2e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 52 3e-07
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 52 5e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 52 5e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 51 8e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 1e-06
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 51 1e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 50 1e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 50 2e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 50 2e-06
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 50 2e-06
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 50 2e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 2e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 49 3e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 49 4e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 49 4e-06
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 48 6e-06
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 48 8e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 48 1e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 48 1e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 47 1e-05
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 47 1e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 47 1e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 47 2e-05
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 47 2e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 47 2e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 47 2e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 47 2e-05
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 46 3e-05
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 46 3e-05
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 46 3e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 46 3e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 45 5e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 45 5e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 45 5e-05
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 45 5e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 45 5e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 44 9e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 1e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 44 2e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 44 2e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 44 2e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 44 2e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 44 2e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 43 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 43 3e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 43 3e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 43 3e-04
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 42 4e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 4e-04
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 42 7e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 42 7e-04
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 42 7e-04
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 42 7e-04
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 42 7e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 0.001
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 41 0.001
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 41 0.001
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 41 0.001
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 41 0.001
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 41 0.001
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 41 0.001
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 41 0.001
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 41 0.001
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 40 0.002
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.002
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 40 0.002
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 40 0.003
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 40 0.003
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 40 0.003
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 40 0.003
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 40 0.003
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 39 0.003
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 39 0.003
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 39 0.003
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.005
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.008
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 38 0.008
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.011
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.011
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 38 0.011
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 38 0.011
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 37 0.014
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 37 0.019
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 36 0.025
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.025
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.025
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.032
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 36 0.032
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.043
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 35 0.057
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 35 0.075
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 35 0.075
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 35 0.075
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 35 0.075
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 34 0.099
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 34 0.099
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 34 0.099
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.13
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 34 0.13
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ... 34 0.13
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 34 0.13
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 34 0.13
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 34 0.13
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 34 0.13
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 33 0.17
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 33 0.17
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 33 0.17
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.17
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.23
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.23
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.23
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 33 0.23
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.23
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 33 0.23
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.30
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 33 0.30
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 33 0.30
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.40
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.40
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.40
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.40
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 32 0.53
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.53
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 31 0.70
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.92
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 31 0.92
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 31 1.2
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 30 1.6
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 30 1.6
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 30 1.6
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 30 1.6
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.6
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 2.1
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 30 2.1
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 30 2.1
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 29 2.8
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 2.8
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 2.8
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 2.8
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 2.8
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 2.8
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 29 3.7
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 3.7
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 29 3.7
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 3.7
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 29 4.9
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 4.9
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 29 4.9
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 4.9
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 28 6.5
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 6.5
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 28 8.6
At4g25250.1 68417.m03633 invertase/pectin methylesterase inhibit... 28 8.6
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 8.6
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 28 8.6
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 28 8.6
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 175 bits (426), Expect = 3e-44
Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 15/206 (7%)
Frame = +2
Query: 236 VSIMNELDSLRQEA-ETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLR 400
VS + E ++ E L++ +R R DT +A+ ++ G + RTL+
Sbjct: 3 VSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQ 62
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH K+Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G V
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 581 ACGGLDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCA 745
ACGGLD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCI 182
Query: 746 LWDIETGQQC----GQF-TGHTGDVM 808
LWD+ TG + G+F +GHT DV+
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVL 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 550
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 551 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 724
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 725 SGDMTCALWDIETGQQCGQFTGHTGD 802
S D TC L+DI TG Q + H GD
Sbjct: 267 SDDGTCRLYDIRTGHQLQVYQPH-GD 291
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 175 bits (426), Expect = 3e-44
Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 15/206 (7%)
Frame = +2
Query: 236 VSIMNELDSLRQEA-ETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLR 400
VS + E ++ E L++ +R R DT +A+ ++ G + RTL+
Sbjct: 3 VSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQ 62
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH K+Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G V
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 581 ACGGLDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCA 745
ACGGLD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCI 182
Query: 746 LWDIETGQQC----GQF-TGHTGDVM 808
LWD+ TG + G+F +GHT DV+
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVL 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 550
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 551 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 724
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 725 SGDMTCALWDIETGQQCGQFTGHTGD 802
S D TC L+DI TG Q + H GD
Sbjct: 267 SDDGTCRLYDIRTGHQLQVYQPH-GD 291
Score = 34.3 bits (75), Expect = 0.099
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 541
R R RT GH + + + D + S DG ++D T +++
Sbjct: 235 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 294
Query: 542 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDN 709
V + A++ SG + G +N C ++ E + + + H +SC D +
Sbjct: 295 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 354
Query: 710 QILTSSGDMTCALW 751
+ T S D +W
Sbjct: 355 ALCTGSWDSNLKIW 368
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 159 bits (385), Expect = 3e-39
Identities = 72/142 (50%), Positives = 104/142 (73%), Gaps = 10/142 (7%)
Frame = +2
Query: 413 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 592
++Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G VACGG
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGG 64
Query: 593 LDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCALWDI 757
LD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC LWD+
Sbjct: 65 LDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 124
Query: 758 ETGQQC----GQF-TGHTGDVM 808
TG + G+F +GHT DV+
Sbjct: 125 TTGLKTSVFGGEFQSGHTADVL 146
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 550
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 147
Query: 551 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 724
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 204
Query: 725 SGDMTCALWDIETGQQCGQFTGHTGD 802
S D TC L+DI TG Q + H GD
Sbjct: 205 SDDGTCRLYDIRTGHQLQVYQPH-GD 229
Score = 34.3 bits (75), Expect = 0.099
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 541
R R RT GH + + + D + S DG ++D T +++
Sbjct: 173 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 232
Query: 542 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDN 709
V + A++ SG + G +N C ++ E + + + H +SC D +
Sbjct: 233 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 292
Query: 710 QILTSSGDMTCALW 751
+ T S D +W
Sbjct: 293 ALCTGSWDSNLKIW 306
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Frame = +2
Query: 335 AQATSNLEPIGRIQM----RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 502
A +T N G + + R +TL GH A I + + +D L SAS D +I+W +
Sbjct: 15 ANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATN 74
Query: 503 TNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 682
+ +H SS + A++ S S+ C D+ C++ R + L GH+ ++
Sbjct: 75 YSLIHRYEGHSSGISDLAWS-SDSHYTCSASDD-CTLRIWDAR-SPYECLKVLRGHTNFV 131
Query: 683 SCCRF-LDDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
C F N I++ S D T +W+++TG+ H+
Sbjct: 132 FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+ LRGH ++ +++ S +VS S D + +W+ T V I S + + +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCA 745
GS + D C I+ K EG + + S +S +F + + IL ++ D T
Sbjct: 182 GSLIVSASHDGSCKIWDAK--EGTC-LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 746 LWDIETGQQCGQFTGHTGDV 805
L + TG+ +TGHT V
Sbjct: 239 LSNYATGKFLKVYTGHTNKV 258
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCAYAP 565
R ++ H I ++H+ D +VSAS DG +WD+ + I +S V ++P
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP 223
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR----FLDDNQILTSSGD 733
+G ++ LD+ + + T + + GH+ + C + I++ S D
Sbjct: 224 NGKFILVATLDSTLKLSNYATG----KFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSED 279
Query: 734 MTCALWDIETGQQCGQFTGHTGDVMVAVA 820
LWD++ + GHT D +++V+
Sbjct: 280 NCVYLWDLQARNILQRLEGHT-DAVISVS 307
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +2
Query: 563 PSGSYVACGGLDNICSIYSLKTREGNV------RVSRELPGHSGYLSCCRFLDDNQILTS 724
PSG G+ N S + T GNV R + L GH+ +SC +F +D +L S
Sbjct: 2 PSGGNGTSNGVANANSTGNAGT-SGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLAS 60
Query: 725 SG-DMTCALWDIETGQQCGQFTGHTGDV 805
+ D T LW ++ GH+ +
Sbjct: 61 ASVDKTMILWSATNYSLIHRYEGHSSGI 88
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 550
+Q + + H + + + DS L S SQDGK+ +W T + S V +
Sbjct: 251 LQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTS 310
Query: 551 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTSS 727
+++ GS + D I+ LK+ ++ +E GH+ Y++ F D ++I+T+S
Sbjct: 311 LSFSRDGSQLLSTSFDQTARIHGLKSG----KLLKEFRGHTSYVNHAIFTSDGSRIITAS 366
Query: 728 GDMTCALWDIET 763
D T +WD +T
Sbjct: 367 SDCTVKVWDSKT 378
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 508
+ RGH + + + SD +++AS D + VWDS TT+
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 58.8 bits (136), Expect = 4e-09
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 1/187 (0%)
Frame = +2
Query: 248 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 427
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 428 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 607
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 608 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQF 784
++ L ++ E H G + F +L T S D T WD+ET + G
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSG 223
Query: 785 TGHTGDV 805
T V
Sbjct: 224 GPETAGV 230
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 58.8 bits (136), Expect = 4e-09
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 1/187 (0%)
Frame = +2
Query: 248 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 427
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 428 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 607
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 608 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQF 784
++ L ++ E H G + F +L T S D T WD+ET + G
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSG 223
Query: 785 TGHTGDV 805
T V
Sbjct: 224 GPETAGV 230
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 58.8 bits (136), Expect = 4e-09
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 1/178 (0%)
Frame = +2
Query: 248 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 427
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE--EAKVVRTLTGHRSNCVSV 200
Query: 428 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 607
++ S S D L +WD +H + V + P G ++ GG DN+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVV 260
Query: 608 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCG 778
++ L ++ E H G + F +L T S D T WD+ET + G
Sbjct: 261 KVWDLTAG----KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIG 314
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
+L GH + I ++ + + + + + G + +WD V + S ++ + P G
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCAL 748
+ A G LD I+ ++ ++G + + GH+ ++ RF D + + S G D +
Sbjct: 207 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNVLRFTPDGRWIVSGGEDNVVKV 262
Query: 749 WDIETGQQCGQFTGHTGDV 805
WD+ G+ +F H G +
Sbjct: 263 WDLTAGKLLHEFKSHEGKI 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +2
Query: 398 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
+ H KI ++ + L + S D + WD T + + ++ V + P G
Sbjct: 275 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKS 334
Query: 578 VACGGLDNICSIYS 619
V C GL I+S
Sbjct: 335 VLC-GLQESLKIFS 347
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKT 628
LVS S D K+ VW + V I ++++ + Y P S +Y+A G D+ Y L+
Sbjct: 479 LVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 629 REGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTGHTGD 802
+ V GH +S +FL +N++ ++S D T LWD++ F GHT +
Sbjct: 538 ISQPLHV---FSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNE 592
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 508
LA A+S + + ++ + R GH + A+ + L S S D L +WD
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 509 KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSC 688
+ S + T + P G +V GGLDN+ ++ L ++ E H G +
Sbjct: 134 CIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG----KLLHEFKFHEGPIRS 189
Query: 689 CRFLDDNQIL-TSSGDMTCALWDIETGQQCG 778
F +L T S D T WD+ET + G
Sbjct: 190 LDFHPLEFLLATGSADRTVKFWDLETFELIG 220
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
+L GH + + ++ + S +++ + G + +WD V A S + P G
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCAL 748
++A G D I+ ++ ++G ++ + GHS +S RF D + + S G D +
Sbjct: 113 EFLASGSSDANLKIWDIR-KKGCIQTYK---GHSRGISTIRFTPDGRWVVSGGLDNVVKV 168
Query: 749 WDIETGQQCGQFTGHTGDV 805
WD+ G+ +F H G +
Sbjct: 169 WDLTAGKLLHEFKFHEGPI 187
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 58.0 bits (134), Expect = 7e-09
Identities = 36/137 (26%), Positives = 67/137 (48%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
L+GH +++ + S R +++A+ DG + +WD T V + SS +++ Y S
Sbjct: 935 LKGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 575 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 754
+A G D + +I+ + R G + +L GH+ ++ R ++D ++T S D T +W
Sbjct: 994 ILAAAGRDTVANIWDI--RSG--KQMHKLKGHTKWIRSIRMVEDT-LITGSDDWTARVWS 1048
Query: 755 IETGQQCGQFTGHTGDV 805
+ G H G V
Sbjct: 1049 VSRGSCDAVLACHAGPV 1065
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 12/188 (6%)
Frame = +2
Query: 290 NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGS---------- 439
N+ RK D + + T+ + +IQ R L+GH + A+H +
Sbjct: 807 NSFSRVRKWVSDNASSDITAAAQK--KIQTNVR-VLKGHGGAVTALHSVTRREVCDLVGD 863
Query: 440 --DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSI 613
D+ +S S D + +WD L+ A + + G D +
Sbjct: 864 REDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIV 923
Query: 614 YSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTGH 793
+ +T + + EL GH +SC + L ++LT++ D T +WD+ T C G
Sbjct: 924 WDKQTTQ----LLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRT-DMCVATVGR 978
Query: 794 TGDVMVAV 817
++++
Sbjct: 979 CSSAILSL 986
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 57.6 bits (133), Expect = 9e-09
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
R GH + A+ + L S S D L VWD+ + + + T ++P
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCA 745
G +V GGLDN+ ++ L ++ E H G + F +L T S D T
Sbjct: 103 GRWVVSGGLDNVVKVWDLTAG----KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 158
Query: 746 LWDIETGQQCG 778
WD+ET + G
Sbjct: 159 FWDLETFELIG 169
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
+L GH + + ++ + S+ +++ + G + +WD + V A S + P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCAL 748
++A G D ++ + ++G ++ + GH+ +S F D + + S G D +
Sbjct: 62 EFLASGSSDTNLRVWDTR-KKGCIQTYK---GHTRGISTIEFSPDGRWVVSGGLDNVVKV 117
Query: 749 WDIETGQQCGQFTGHTGDV 805
WD+ G+ +F H G +
Sbjct: 118 WDLTAGKLLHEFKCHEGPI 136
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
L + S D + WD T + ++ V A+ P G + C GLD+ +YS
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYS 202
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 565
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 444
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 742
SG V G LD+ I+ + G ++ L GH + F Q+L SS D T
Sbjct: 445 SGDVVCAGTLDSF-EIFVWSKKTGQIK--DILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 743 ALWDIETGQQCGQFTGHTGDVM 808
LWD+ + + H DV+
Sbjct: 502 RLWDVFASKGTVETFRHNHDVL 523
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 665 GHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQFTGHTGDV 805
GH ++C + D+Q+L T + D +W++ +G FT HT V
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 394
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 565
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 484
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 742
SG V G LD+ I+ + G ++ L GH + F Q+L SS D T
Sbjct: 485 SGDVVCAGTLDSF-EIFVWSKKTGQIK--DILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 743 ALWDIETGQQCGQFTGHTGDVM 808
LWD+ + + H DV+
Sbjct: 542 RLWDVFASKGTVETFRHNHDVL 563
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 665 GHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQFTGHTGDV 805
GH ++C + D+Q+L T + D +W++ +G FT HT V
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 434
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH I + + SD+R +VSAS D L +WD T + + + +++ + P + +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 581 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQILTSSGDMTCALWDI 757
G D I+ + T + + LP HS ++ F D + I++SS D C +WD
Sbjct: 129 VSGSFDETVRIWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 758 ETG 766
TG
Sbjct: 185 GTG 187
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+TL GH + +++ S +VS S D + +WD T + +P S V +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCA 745
GS + D +C I+ T G+ V + + +S RF + + IL + D T
Sbjct: 167 GSLIVSSSYDGLCRIWDSGT--GHC-VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Query: 746 LWDIETGQQCGQFTGH 793
LW+I + + +TGH
Sbjct: 224 LWNISSAKFLKTYTGH 239
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRS-----SWVMTC 553
+TL H + ++ + SD R L SAS D + + +T N A P++ + +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL-DDNQILTSSG 730
A++ ++ D ++ ++T + + L GH+ Y C F N I++ S
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGS----LIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 731 DMTCALWDIETGQQCGQFTGHTGDV 805
D T +WD+ TG+ H+ V
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPV 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCAYAP 565
+ L H + A+ + D +VS+S DG +WDS T + V I + V ++P
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 745
+G ++ G LDN ++++ + + + + S + +I++ S D
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 746 LWDIETGQQCGQFTGHTGDVM 808
+W++ + + + GHT VM
Sbjct: 269 MWELNSKKLLQKLEGHTETVM 289
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWG---SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+T GH+ Y + ++ + +VS S+D + +W+ ++ + + + VM A
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 560 APSGSYVACGGLDNICSIYSLK 625
P+ + +A G LD I++ K
Sbjct: 294 HPTENLIASGSLDKTVRIWTQK 315
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 55.6 bits (128), Expect = 4e-08
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 6/159 (3%)
Frame = +2
Query: 338 QATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 517
QA + P+ R +T+ GH + + + D + L S S D + +WD +T +
Sbjct: 90 QAVFRIRPVNRCS----QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF 145
Query: 518 AIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 697
+WV+T A++P G ++ G I ++G + S L GH +++ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSG--EICCWNPKKGELEGS-PLTGHKKWITGISW 202
Query: 698 ----LDD--NQILTSSGDMTCALWDIETGQQCGQFTGHT 796
L + +TSS D +WDI + +GHT
Sbjct: 203 EPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHT 241
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 398 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
RGH+ +Y + W +DSR L+S S+D L +W+ T +P + V ++P G
Sbjct: 399 RGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEK 458
Query: 578 VACGGLDNICSIY 616
V GG D + ++
Sbjct: 459 VVSGGKDRVLKLW 471
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL--RSSWVMTCAYAP 565
T +GH + + W D ++LVS S+ G++ W+ ++ PL W+ ++ P
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKK-GELEGSPLTGHKKWITGISWEP 204
Query: 566 SGSYVAC-----GGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 730
C D I+ + ++ + +S GH+ ++C ++ D I T S
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLS----GHTLAVTCVKWGGDGIIYTGSQ 260
Query: 731 DMTCALWDIETGQQCGQFTGH 793
D T +W+ G+ + GH
Sbjct: 261 DCTIKMWETTQGKLIRELKGH 281
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 550
+ + ++ L GH + +++ D + + SAS D + +W+ T V V
Sbjct: 348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQ 407
Query: 551 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 730
+++ + G D+ I+ ++T+ ++ ++LPGH+ + + D + + S G
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWEIRTK----KLKQDLPGHADEVFAVDWSPDGEKVVSGG 463
Query: 731 -DMTCALW 751
D LW
Sbjct: 464 KDRVLKLW 471
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = +2
Query: 434 GSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCAYAPSGSYVACGGLDNICS 610
G LVS S D + +W+ + + + V ++P G ++A D
Sbjct: 326 GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Query: 611 IYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS-SGDMTCALWDIETGQQCGQFT 787
+++ T + V V R GH G + + D+++L S S D T +W+I T +
Sbjct: 386 LWNGITGQF-VTVFR---GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 788 GHTGDV 805
GH +V
Sbjct: 442 GHADEV 447
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 644 RVSRELPGHSGYLSCCRFLDDN-QILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
R S+ + GH+ + C F D Q+ + SGD T LWD+ T GH V+
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVL 155
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 55.6 bits (128), Expect = 4e-08
Identities = 34/134 (25%), Positives = 57/134 (42%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL GH+ ++ + + + SA D ++ WD + + V A P+
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTL 266
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 751
V GG D++C ++ ++T+ + V LP S S D Q++T S D T W
Sbjct: 267 DVVLTGGRDSVCRVWDIRTKM-QIFV---LPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Query: 752 DIETGQQCGQFTGH 793
D+ G+ T H
Sbjct: 323 DLRYGKSMATITNH 336
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 653 RELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
R L GH G++ F N+ T S D T +WD+ TG TGH G V
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQV 215
Score = 37.5 bits (83), Expect = 0.011
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 1/145 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
R L+GHL + ++ + + + S D + +WD T + V A +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCA 745
+Y+ G D + L+ +V R GH + C + +LT D C
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQN----KVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 746 LWDIETGQQCGQFTGHTGDVMVAVA 820
+WDI T Q H DV +A
Sbjct: 280 VWDIRTKMQIFVLP-HDSDVFSVLA 303
Score = 31.5 bits (68), Expect = 0.70
Identities = 28/149 (18%), Positives = 57/149 (38%)
Frame = +2
Query: 374 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 553
Q + R+ GHL +Y + +++ +D VWD T ++ +P S V +
Sbjct: 243 QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSV 301
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 733
P+ V G D+ + L+ + ++ + +N +++S D
Sbjct: 302 LARPTDPQVITGSHDSTIKFWDLRYGKSMATITNH---KKTVRAMALHPKENDFVSASAD 358
Query: 734 MTCALWDIETGQQCGQFTGHTGDVMVAVA 820
+ + G+ C D++ AVA
Sbjct: 359 -NIKKFSLPKGEFCHNMLSLQRDIINAVA 386
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL GH+ ++ + + + SA D ++ WD + + S V A P+
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCA 745
+ GG D++C ++ ++T+ +++ L GH + C F D Q++T S D T
Sbjct: 273 DVLLTGGRDSVCRVWDIRTK---MQIF-ALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIK 327
Query: 746 LWDIETGQQCGQFTGHTGDV 805
WD+ G+ T H V
Sbjct: 328 FWDLRYGKTMSTLTHHKKSV 347
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 1/140 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
R ++GHL + ++ + + + S D + +WD T + V A +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCA 745
+Y+ G D + L+ +V R GH + C +L + G D C
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQN----KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 746 LWDIETGQQCGQFTGHTGDV 805
+WDI T Q +GH V
Sbjct: 286 VWDIRTKMQIFALSGHDNTV 305
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +2
Query: 374 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 553
Q + R+ GHL+ +Y + L++ +D VWD T ++ A+ + V +
Sbjct: 249 QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV 308
Query: 554 AYAPSGSYVACGGLDNICSIYSLK 625
P+ V G D + L+
Sbjct: 309 FTRPTDPQVVTGSHDTTIKFWDLR 332
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG- 571
L+GH I +HW SD +VSAS D + WD T ++ + SS+V +C G
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD-DNQILTSSGDMTCAL 748
+ G D ++ ++ R G ++ + ++ F D ++I T D +
Sbjct: 152 PLIISGSDDGTAKLWDMRQR-GAIQTFPD----KYQITAVSFSDAADKIFTGGVDNDVKV 206
Query: 749 WDIETGQQCGQFTGH 793
WD+ G+ GH
Sbjct: 207 WDLRKGEATMTLEGH 221
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = +2
Query: 413 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 592
+I A+ + + + + D + VWD + + + +P GSY+ G
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 593 LDNICSIYSLKTREGNVRVSRELPGH-----SGYLSCCRFLDDNQILTSSGDMTCALWDI 757
+DN ++ ++ R + GH L C D ++ S D +WD
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 758 ETGQQCGQFTGHTGDV 805
+ + + GHTG V
Sbjct: 302 TSRRTIYKLPGHTGSV 317
Score = 45.6 bits (103), Expect = 4e-05
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT---TNKV------HAIPLRSSWV 544
TL GH I M D L++ D KL VWD N+ H + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN-L 275
Query: 545 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 724
+ C+++P G+ V G D + I+ +R R +LPGH+G ++ C F I+ S
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSR----RTIYKLPGHTGSVNECVFHPTEPIIGS 331
Query: 725 -SGDMTCALWDI 757
S D L +I
Sbjct: 332 CSSDKNIYLGEI 343
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 536 SWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQ 712
S V T + P+G+ +A G D ++ + G+ + L GH + + D +Q
Sbjct: 54 SAVYTMKFNPAGTLIASGSHDREIFLWRV---HGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 713 ILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
I+++S D T WD+ETG+Q + H+ V
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFV 141
Score = 36.3 bits (80), Expect = 0.025
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK-VHAIPLRSSWVMTCAYAPSG 571
L GH + +Y M + + S S D ++ +W H K + + ++ + G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCC-RFLDDNQILTSSGDMTCA 745
S + D + ++T + +++ HS ++ SCC I++ S D T
Sbjct: 109 SQIVSASPDKTVRAWDVETG----KQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 746 LWDI 757
LWD+
Sbjct: 165 LWDM 168
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +2
Query: 344 TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 523
T+ + + RIQ R + GHL+ + W + + + S D + +WD T V
Sbjct: 483 TARIWSMDRIQ--PLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 524 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 703
S V++ A +P G Y+A G D ++ L T R L GH+ + +
Sbjct: 538 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST----ARCITPLMGHNSCVWSLSYSG 593
Query: 704 DNQILTS-SGDMTCALWDI 757
+ +L S S D T LWD+
Sbjct: 594 EGSLLASGSADCTVKLWDV 612
Score = 50.8 bits (116), Expect = 1e-06
Identities = 39/158 (24%), Positives = 67/158 (42%)
Frame = +2
Query: 335 AQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 514
A+ S+ + IG R+ L GH +Y+ + ++S+S D + +W + +
Sbjct: 394 AENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL 453
Query: 515 HAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR 694
+ V ++P G Y A D I+S+ ++ R + GH +
Sbjct: 454 VCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD----RIQPLRIMAGHLSDVDW-- 507
Query: 695 FLDDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
+ N I T S D T LWD++TG+ F GH V+
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVL 545
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/102 (24%), Positives = 47/102 (46%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
R GH + + ++ D R + S +DG +++WD T + + +S V + +Y+
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 594
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR 694
GS +A G D ++ + T + + E G+S L R
Sbjct: 595 GSLLASGSADCTVKLWDV-TSSTKLTKAEEKNGNSNRLRSLR 635
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Frame = +2
Query: 398 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
+GH ++ + S S D +W + +++ + + + + + P+ +Y
Sbjct: 457 KGHNYPVWDAQFSPFGHYFASCSHDRTARIW---SMDRIQPLRIMAGHLSDVDWHPNCNY 513
Query: 578 VACGGLDNICSIYSLKTREGNVRVSRELPGH-SGYLSCCRFLDDNQILTSSGDMTCALWD 754
+A G D ++ ++T E VR+ GH S LS D + + D T +WD
Sbjct: 514 IATGSSDKTVRLWDVQTGEC-VRI---FIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 569
Query: 755 IETGQQCGQFTGHTGDV 805
+ T + GH V
Sbjct: 570 LSTARCITPLMGHNSCV 586
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +2
Query: 383 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK--VHAIPLRSSWVMTCA 556
T R GH + ++ + +D+R +VSAS+D + +W++ K + WV
Sbjct: 97 TTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVR 156
Query: 557 YAPSG--SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 730
++P+ + D +++L+ N ++ L GHSGYL+ D + S G
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQ----NCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Query: 731 -DMTCALWDIETGQQ 772
D LWD+ G++
Sbjct: 213 KDGVILLWDLAEGKK 227
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +2
Query: 386 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
+R L GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 736
+ D +++ E +S E GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 737 TCALWDIETGQQCGQFTGHTG 799
T +W+++ + GH+G
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSG 194
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 653 RELPGHSGYLSCCRFLDDNQI-LTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
R L GHS ++ D Q L+ S D LWD+ TG+ +F GHT DV+
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVL 109
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/104 (28%), Positives = 50/104 (48%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
+VSAS D + VW+ +++ S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIET 763
EG S L S S C F + L ++ + + +WD+E+
Sbjct: 224 EGKKLYS--LEAGSIIHSLC-FSPNRYWLCAATENSIRIWDLES 264
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/84 (21%), Positives = 40/84 (47%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ R +L GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 560 APSGSYVACGGLDNICSIYSLKTR 631
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 52.0 bits (119), Expect = 5e-07
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Frame = +2
Query: 323 DTSLAQATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
D +LA A+ L+ + R+ +RT R++ +GH+ ++++++ + +L S +D + +W
Sbjct: 392 DGALA-ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Query: 491 DSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPG 667
D ++ IP ++ V Y P G ++A D +I+S + + + + L G
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR----DFSLVKSLAG 506
Query: 668 HSGYLSCCRFLDDNQ-ILTSSGDMTCALW 751
H ++ D+ I T S D T LW
Sbjct: 507 HESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH +Y + + D S D VWD T + V + ++P+G ++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 581 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDMTCALWD 754
A GG DN C I+ L+ R+ ++ + +P H+ +S ++ + + T+S DM +W
Sbjct: 439 ASGGEDNQCRIWDLRMRK-SLYI---IPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Query: 755 IETGQQCGQFTGHTGDV 805
GH V
Sbjct: 495 GRDFSLVKSLAGHESKV 511
Score = 41.1 bits (92), Expect = 9e-04
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+T GHL ++ + + + L + S D +WD +T ++ S V A+
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCA 745
G+ A GLD++ ++ L+T R GH + F + L S G D C
Sbjct: 393 GALAASCGLDSLARVWDLRTG----RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCR 448
Query: 746 LWDI 757
+WD+
Sbjct: 449 IWDL 452
Score = 34.7 bits (76), Expect = 0.075
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDS-HTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 616
D + L + S G +W+ TN + + ++P +A D ++
Sbjct: 266 DGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Query: 617 SLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQFTGH 793
KT +G + + E GH L+ F + L T+S D T LWDI TG + GH
Sbjct: 326 --KT-DGTLLQTFE--GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 794 TGDV 805
+ V
Sbjct: 381 SRSV 384
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 425 MHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR-------SSWVMTCAYAPSGSYVA 583
MHW VS+ + K I W S K H + LR S + A + G Y+A
Sbjct: 186 MHWD------VSSGKTDKYI-WPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 238
Query: 584 CGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSC-CRFLDDNQILTSSGDMTCALWDIE 760
GG+D I+ ++TRE +V+ PGH +SC C +++ + S D T +W++E
Sbjct: 239 TGGVDRHVHIWDVRTRE-HVQA---FPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVE 294
Query: 761 TGQQCGQFTGHTGDVM 808
+ GH G+++
Sbjct: 295 DKAFITENHGHQGEIL 310
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 683 SCCRFLDDNQILTSSGDMTCALW 751
SCC F+ DN+ L+ S + T ALW
Sbjct: 351 SCC-FISDNEYLSGSDNGTVALW 372
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Frame = +2
Query: 395 LRGHLAKIYAMHW-----GSDSRN----LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 547
LR H +IY + W G+++ N L SAS D + +WD+ + + V
Sbjct: 486 LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVY 545
Query: 548 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 727
+ A++P+G Y+A G LD I+S+K EG ++ + G+ G C + N+I
Sbjct: 546 SLAFSPNGEYIASGSLDKSIHIWSIK--EG--KIVKTYTGNGGIFEVCWNKEGNKIAACF 601
Query: 728 GDMTCALWD 754
D + + D
Sbjct: 602 ADNSVCVLD 610
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL H I+++ W L++ S D +VWD S + + +
Sbjct: 360 TLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS-SGDMTCAL 748
S+ A D++ IY K G R ++ GH G ++C ++ +L S S D T +
Sbjct: 420 SF-ATSSTDSM--IYLCKI--GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKI 474
Query: 749 WDIETGQQCGQFTGHTGDV 805
W+I+ HT ++
Sbjct: 475 WNIKQSTFVHDLREHTKEI 493
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 18/158 (11%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS--------HTTNKVHAIPLR---- 532
R L GH +++ A W + L S S D +W HT ++A+ L+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKG 318
Query: 533 -----SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 697
S V T + G+ +A G D I++L N + L H G + ++
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-----NGELISTLSKHKGPIFSLKW 373
Query: 698 -LDDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
+ +LT S D T +WD++ + QF H+G +
Sbjct: 374 NKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTL 411
Score = 37.1 bits (82), Expect = 0.014
Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Frame = +2
Query: 374 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 553
+ R +T GH ++ + W L S S D +W+ + VH + + + T
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 554 AYAPSGS---------YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
++P+G +A D+ ++ + G + S GH + F +
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDAEL--GKMLCS--FNGHREPVYSLAFSPN 552
Query: 707 NQILTSSG-DMTCALWDIETGQQCGQFTGHTG 799
+ + S D + +W I+ G+ +TG+ G
Sbjct: 553 GEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG 584
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 653 RELPGHSGYLSCCRFLDDNQILTS-SGDMTCALWDIETGQQCGQFTGHTGDVMV 811
R L GH+ + C + +L S SGD T +W I G TG + ++
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI 312
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +2
Query: 365 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN-KVHAIPLRSSW 541
G ++ L H + + + D S + + +VWD T K++ + ++
Sbjct: 342 GDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTAR 401
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILT 721
+ + A++P+ VA G +D +Y + + +R H G ++ F+DD + +
Sbjct: 402 INSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARN--AHLGGVNAVAFIDDCTVAS 459
Query: 722 SSGDMTCALWDIE 760
S D + LW IE
Sbjct: 460 SGEDASVRLWHIE 472
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 493
GH IYA+ W DS+ +++ S D VW+
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 533 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ 712
S++V Y+P G+ D IY KT + ++ E GH G + + D++
Sbjct: 51 SNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASE-DGHKGSIYAVSWSPDSK 109
Query: 713 -ILTSSGDMTCALWDI 757
+LT S D + +W++
Sbjct: 110 RVLTVSADKSAKVWEV 125
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +2
Query: 386 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
+R + GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 736
+ D +++ E +S E GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 737 TCALWDIETGQQCGQFTGHTG 799
T +W+++ + GH+G
Sbjct: 174 TVKVWNLQNCKLRNTLAGHSG 194
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 653 RELPGHSGYLSCCRFLDDNQI-LTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
R + GHS ++ D Q L+ S D LWD+ TG+ +F GHT DV+
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVL 109
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/104 (28%), Positives = 49/104 (47%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
+VSAS D + VW+ + + S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIET 763
EG S L S S C F + L ++ + + +WD+E+
Sbjct: 224 EGKKLYS--LEAGSIIHSLC-FSPNRYWLCAATENSIRIWDLES 264
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ R TL GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 560 APSGSYVACGGLDNICSIYSLKTR 631
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-- 568
L+GH ++I + W SD+R L S D KL VW+ H+T V ++ V A++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 569 GSYVACGGLDNIC 607
G + GG + C
Sbjct: 348 GLLASGGGTADRC 360
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT-TNKVHAIPLRSSWVM 547
++ + RT+ GH ++ A+ W S L S S+D ++ D T + V + S +
Sbjct: 239 LRCKNIRTMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSKLKGHKSEIC 296
Query: 548 TCAYAPSGSYVACGGLDN 601
++ +A GG DN
Sbjct: 297 GLKWSSDNRELASGGNDN 314
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 431 WGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNI 604
W + LVS ++IVW T +K+ + S V+ A +P G + G D
Sbjct: 386 WSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDET 445
Query: 605 CSIYSL 622
+++
Sbjct: 446 LRFWNV 451
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVW----DSHTTNK---VHAIPLRSSWVMTCAYAPSGSYVACGGLD 598
D +V+A+ G VW T + +H + + ++ C +P+ Y+A D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 599 NICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQC 775
I+++ ++ + L GH ++ C F D + L T+S DMT LW + G++
Sbjct: 233 KTVKIWNVD----GFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEV 288
Query: 776 GQFTGH 793
+ GH
Sbjct: 289 KVYQGH 294
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/127 (18%), Positives = 52/127 (40%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
T H + A+ + D++ + S S+DG + +WD ++ V T P+
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAA-VNTVVLHPNQ 131
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 751
+ + G + ++ L+ + + E+ + S D ++ ++ TC +W
Sbjct: 132 TELISGDQNGNIRVWDLRANSCSCELVPEV--DTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 752 DIETGQQ 772
+ G+Q
Sbjct: 190 RLLRGKQ 196
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Frame = +2
Query: 419 YAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNKVHAIPLRSSWVMTCAYAPSGS-YV 580
Y H G+ + S S DG + VWD + V + S V + PSG V
Sbjct: 27 YTRHGGASTVG-ASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAV 85
Query: 581 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIE 760
A G D +Y ++ V + L GH+ +S RFLD ++T+ D LW +E
Sbjct: 86 AVGCADRKGYVYDIRKL---VDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVE 142
Query: 761 TGQQCGQFTGHTGD 802
G+ + GH +
Sbjct: 143 DGRVIRTYEGHVNN 156
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSY 577
G+ I+++ + +D R +V+ S D + V+D +S V T +A SG+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 578 VACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 754
+ G DN+C ++ + G + + L GH ++ D + S+G D T LWD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 755 I 757
I
Sbjct: 347 I 347
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIETGQQCGQ-FTGHTGDV 805
+ V+V HS Y+ C +L+SS DM LWD E G C Q F GH+ V
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 806 MVAV 817
M V
Sbjct: 146 MQVV 149
Score = 35.1 bits (77), Expect = 0.057
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLK 625
++S+S D + +WD + S +VM + P + A LD I++L
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 626 TREGNVRVSRELPGHSGYLSCCRFL---DDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ + N L H ++C + D ++T S D T +WD +T GHT
Sbjct: 174 SPDPNFT----LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Query: 797 GDV 805
+V
Sbjct: 230 HNV 232
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIETGQQCGQ-FTGHTGDV 805
+ V+V HS Y+ C +L+SS DM LWD E G C Q F GH+ V
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 806 MVAV 817
M V
Sbjct: 146 MQVV 149
Score = 35.1 bits (77), Expect = 0.057
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLK 625
++S+S D + +WD + S +VM + P + A LD I++L
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 626 TREGNVRVSRELPGHSGYLSCCRFL---DDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ + N L H ++C + D ++T S D T +WD +T GHT
Sbjct: 174 SPDPNFT----LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Query: 797 GDV 805
+V
Sbjct: 230 HNV 232
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIETGQQCGQ-FTGHTGDV 805
+ V+V HS Y+ C +L+SS DM LWD E G C Q F GH+ V
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 806 MVAV 817
M V
Sbjct: 146 MQVV 149
Score = 35.1 bits (77), Expect = 0.057
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLK 625
++S+S D + +WD + S +VM + P + A LD I++L
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 626 TREGNVRVSRELPGHSGYLSCCRFL---DDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ + N L H ++C + D ++T S D T +WD +T GHT
Sbjct: 174 SPDPNFT----LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Query: 797 GDV 805
+V
Sbjct: 230 HNV 232
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA 556
R R TL GH K+ A+ SR++VSA+ D + +WD H + + S+ C
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICL 365
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL-DDNQILTSSGD 733
+ G V G +D ++ ++T ++ E+ GHS ++ + N+ILTS D
Sbjct: 366 -SIDGLTVFSGHMDGNLRLWDIQTG----KLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Query: 734 MTCALWDIETGQQCG 778
++D T + CG
Sbjct: 421 NVHNVFDTRTLEICG 435
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D + S DG L +WD T + + SS V + + + +G+ + G DN+ +++
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 620 LKTRE--GNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETG 766
+T E G +R S S + C DD+ + S D + +W + G
Sbjct: 428 TRTLEICGTLRASGNRLA-SNWSRSCISPDDDYVAAGSADGSVHVWSLSKG 477
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP- 565
++L G L I M D++++++A+ L VWD + H + + V +
Sbjct: 267 KSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKF 326
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 745
S +V D ++ L +G + + S + C +D + + D
Sbjct: 327 SSRHVVSAAYDRTIKLWDL--HKGYC--TNTVLFTSNCNAICLSIDGLTVFSGHMDGNLR 382
Query: 746 LWDIETGQQCGQFTGHTGDV 805
LWDI+TG+ + GH+ V
Sbjct: 383 LWDIQTGKLLSEVAGHSSAV 402
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNK-------VHAIPLRSSWVMTCAYAPSGSYVACGGLD 598
D +V+A+ G VW S + +H + +S ++ C +P Y+A D
Sbjct: 179 DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 599 NICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQILTSSGDMTCALWDIETGQQC 775
I++L ++ + L GH ++ C F +D ++T+S D T LW + G++
Sbjct: 239 KTVKIWNLD----GFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEE 294
Query: 776 GQFTGH 793
+ H
Sbjct: 295 MVYQAH 300
Score = 33.5 bits (73), Expect = 0.17
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY-SLK 625
L+S Q+G + VWD +P + + + G+ V C ++ SL
Sbjct: 140 LISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLC 199
Query: 626 TREGNVRVS--RELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQCGQFTGH 793
R+ +L H+ ++ C N+ L T+S D T +W+++ + TGH
Sbjct: 200 ERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGH 258
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/104 (21%), Positives = 39/104 (37%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
L+ H + I ++ L +AS D + +W+ + WV C ++ G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 575 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
Y+ D ++S+ R G + + H CC L D
Sbjct: 273 YLVTASSDTTARLWSM--RAGKEEMVYQ--AHRKATVCCTLLRD 312
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.8 bits (111), Expect = 4e-06
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Frame = +2
Query: 386 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
+R L GH + + SD + +S S DG+L +WD + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 736
+ D +++ E +S GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 737 TCALWDIETGQQCGQFTGHTGDV-MVAVA 820
T +W++ + GHTG V VAV+
Sbjct: 175 TVKVWNLSNCKLRSTLAGHTGYVSTVAVS 203
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Frame = +2
Query: 383 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTC 553
TRR + GH + ++ + D+R +VSAS+D + +W++ K WV
Sbjct: 98 TRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 156
Query: 554 AYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 727
++P+ + D +++L N ++ L GH+GY+S D + S
Sbjct: 157 RFSPNTLQPTIVSASWDKTVKVWNL----SNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 212
Query: 728 G-DMTCALWDIETGQQ 772
G D LWD+ G++
Sbjct: 213 GKDGVVLLWDLAEGKK 228
Score = 42.7 bits (96), Expect = 3e-04
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSHTTNKVHAIPLR-----SSWVMTC 553
T+R H + A+ D+ ++ VSAS+D +I+W +K + + R S +V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHS-GYLSCCRFLDDNQILTSSG 730
+ G + G D ++ L +R GH+ LS LD+ QI+++S
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 731 DMTCALWD 754
D T LW+
Sbjct: 126 DRTIKLWN 133
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/104 (27%), Positives = 48/104 (46%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
+VSAS D + VW+ + + +V T A +P GS A GG D + ++ L
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL--A 224
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIET 763
EG S L +S + C F + L ++ + +WD+E+
Sbjct: 225 EGKKLYS--LEANSVIHALC-FSPNRYWLCAATEHGIKIWDLES 265
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ R TL GH + + D S +DG +++WD K++++ S C +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC-F 243
Query: 560 APSGSYVACGGLDNICSIYSLKTR 631
+P+ Y C ++ I+ L+++
Sbjct: 244 SPN-RYWLCAATEHGIKIWDLESK 266
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
GH + I + W + NL SA +DG+L++WD+ T H + + V ++ P +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEW 274
Query: 578 V-ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSG-DMTCAL 748
V A D+ +++ L+ + V + H G + + +++ +L SSG D +
Sbjct: 275 VLATASSDSTVALFDLRKLNAPLHV---MSSHEGEVFQVEWDPNHETVLASSGEDRRLMV 331
Query: 749 WDI 757
WD+
Sbjct: 332 WDL 334
Score = 29.5 bits (63), Expect = 2.8
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 9/208 (4%)
Frame = +2
Query: 209 VPRELCVTRVSIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTR 388
+P+ R+ + E++ R + K + A+ + C+ L + +
Sbjct: 104 IPKVEIRQRIRVDGEVNRARCMPQ--KPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPD 161
Query: 389 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT------NKVHAIPLRSSWVM 547
L GH + Y + W L+S SQD K+ +WD T N + S +
Sbjct: 162 LRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIA 221
Query: 548 TCA-YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 724
+ + + + G D I+ +T + +V + YLS F ++ + T+
Sbjct: 222 DVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQV-KVHEREVNYLSFNPF-NEWVLATA 279
Query: 725 SGDMTCALWDI-ETGQQCGQFTGHTGDV 805
S D T AL+D+ + + H G+V
Sbjct: 280 SSDSTVALFDLRKLNAPLHVMSSHEGEV 307
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 48.0 bits (109), Expect = 8e-06
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 547
R+Q L GH +++ + W D R L S D +L+VW++H+ + + ++ V
Sbjct: 285 RVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
Query: 548 TCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 724
++P S +A GG I T GN S + L+ + + N+I+++
Sbjct: 345 AITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSK--NVNEIVST 402
Query: 725 SG--DMTCALWDIETGQQCGQFTGHTGDVM 808
G LW + + TGH+ V+
Sbjct: 403 HGYSQNQIMLWKYPSMSKVATLTGHSMRVL 432
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/122 (27%), Positives = 50/122 (40%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 575 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 754
+V GG D + L TRE + ++E P L DN I ++ D + W
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQ------LALQDNSIWVATTDSSVERWP 364
Query: 755 IE 760
E
Sbjct: 365 AE 366
Score = 35.1 bits (77), Expect = 0.057
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 4/145 (2%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC--AY 559
RTLR H + + + + N+V S G++ +WD P ++ + A
Sbjct: 120 RTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGAN 179
Query: 560 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DM 736
P S G +NI S+ S + +++ GH + D +L S G +
Sbjct: 180 GPVTSLRTVGSSNNI-SVQSSPSHGYTPTIAK---GHKESVYALAMNDTGTMLVSGGTEK 235
Query: 737 TCALWDIETGQQCGQFTGHTGDVMV 811
+WD TG + + GHT +V V
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRV 260
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +2
Query: 398 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 578 VACGGLDNICSIYSL 622
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/122 (27%), Positives = 50/122 (40%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 575 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 754
+V GG D + L TRE + ++E P L DN I ++ D + W
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQ------LALQDNSIWVATTDSSVERWP 364
Query: 755 IE 760
E
Sbjct: 365 AE 366
Score = 35.1 bits (77), Expect = 0.057
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 4/145 (2%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC--AY 559
RTLR H + + + + N+V S G++ +WD P ++ + A
Sbjct: 120 RTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGAN 179
Query: 560 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DM 736
P S G +NI S+ S + +++ GH + D +L S G +
Sbjct: 180 GPVTSLRTVGSSNNI-SVQSSPSHGYTPTIAK---GHKESVYALAMNDTGTMLVSGGTEK 235
Query: 737 TCALWDIETGQQCGQFTGHTGDVMV 811
+WD TG + + GHT +V V
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRV 260
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +2
Query: 398 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 577
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 578 VACGGLDNICSIYSL 622
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G L +W+ T V + + V + + +V G D +Y+ T
Sbjct: 30 ILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTM 89
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIETGQQCGQ-FTGHTGDV 805
+ ++V H+ Y+ C +L+SS DM LWD E G C Q F GH+ V
Sbjct: 90 D-KIKV---FEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYV 145
Query: 806 M 808
M
Sbjct: 146 M 146
Score = 35.1 bits (77), Expect = 0.057
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAI-PLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLK 625
++S+S D + +WD I S +VM + P + A LD I++L
Sbjct: 114 VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 626 TREGNVRVSRELPGHSGYLSCCRFL---DDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ + N + L G ++C + D ++T S D T +WD +T GHT
Sbjct: 174 SPDPNFTLDAHLKG----VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Query: 797 GDV 805
+V
Sbjct: 230 HNV 232
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +2
Query: 392 TLRGHLAKIYAMHW--GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
TL HL + + + G D L++ S D VWD T + V + + V ++ P
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 566 SGSYVACGGLDNICSIYSLKT 628
+ G D I+ T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Frame = +2
Query: 341 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 505
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 506 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 679
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 680 LSCCRFLDDNQILTSSGDMTCALWDI 757
+S RF+D + +++SS D T LWD+
Sbjct: 665 VSYVRFVDSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Frame = +2
Query: 341 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 505
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 506 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 679
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 680 LSCCRFLDDNQILTSSGDMTCALWDI 757
+S RF+D + +++SS D T LWD+
Sbjct: 665 VSYVRFVDSSTLVSSSTDNTLKLWDL 690
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP--S 568
L GH +++ + W D+R L S D +L VW+ H+T V ++ V A++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG--DMTC 742
G + GG + C + T N +S + S + + N+++++ G
Sbjct: 391 GLLASGGGTADRCIRFWNTTT--NTHLS-SIDTCSQVCNLAWSKNVNELVSTHGYSQNQI 447
Query: 743 ALWDIETGQQCGQFTGHTGDVM 808
+W T + TGHT V+
Sbjct: 448 IVWKYPTMSKIATLTGHTYRVL 469
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCAYAP 565
RT+ GH ++ A+ WGS L S S+D ++ D + V + S V ++
Sbjct: 288 RTMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSY 345
Query: 566 SGSYVACGGLDN 601
+A GG DN
Sbjct: 346 DNRELASGGNDN 357
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 410 AKIYAMHWGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 583
+++ + W + LVS ++IVW T +K+ + + V+ A +P G +
Sbjct: 422 SQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIV 481
Query: 584 CGGLDNICSIYSL 622
G D +++
Sbjct: 482 TGAGDETLRFWNV 494
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 748
Y+ GG + I ++ L + + PG L+ D IL+S D+ L
Sbjct: 115 KYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLH--GDQTILSSCTDIGGVRL 172
Query: 749 WDIETGQ 769
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 562
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 563 PSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMT 739
P+ Y LD Y L + +VS + + F D IL T +
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVD--YTAAAFHPDGLILGTGTSQSV 376
Query: 740 CALWDIETGQQCGQFTGHTGDV 805
+WD+++ +F GHTG+V
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEV 398
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV--MTCAYAP 565
TL H A++ A+ ++ VSAS DG +D + + + + S V A+ P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 745
G + G ++ I+ +K+ + NV + GH+G ++ F ++ L ++ +
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS-QANVA---KFDGHTGEVTAISFSENGYFLATAAEDGVR 419
Query: 746 LWDI 757
LWD+
Sbjct: 420 LWDL 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 562
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 563 PSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMT 739
P+ Y LD Y L + +VS + + F D IL T +
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVD--YTAAAFHPDGLILGTGTSQSV 376
Query: 740 CALWDIETGQQCGQFTGHTGDV 805
+WD+++ +F GHTG+V
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEV 398
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV--MTCAYAP 565
TL H A++ A+ ++ VSAS DG +D + + + + S V A+ P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 745
G + G ++ I+ +K+ + NV + GH+G ++ F ++ L ++ +
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS-QANVA---KFDGHTGEVTAISFSENGYFLATAAEDGVR 419
Query: 746 LWDI 757
LWD+
Sbjct: 420 LWDL 423
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 46.8 bits (106), Expect = 2e-05
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 547
R++++ + R K +H ++++ G L +W+ T + + V
Sbjct: 4 RLEIKRKLAQRSERVKSVDLH--PTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVR 61
Query: 548 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTS 724
+ + +V G D +Y+ T + V+V HS Y+ C +L+S
Sbjct: 62 SAKFVARKQWVVAGADDMYIRVYNYNTMD-KVKV---FEAHSDYIRCVAVHPTLPYVLSS 117
Query: 725 SGDMTCALWDIETGQQCGQ-FTGHTGDVM 808
S DM LWD E G C Q F GH+ VM
Sbjct: 118 SDDMLIKLWDWEKGWACTQIFEGHSHYVM 146
Score = 34.3 bits (75), Expect = 0.099
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAI-PLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLK 625
++S+S D + +WD I S +VM + P + A LD I++L
Sbjct: 114 VLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 626 TREGNVRVSRELPGHSGYLSCCRFL---DDNQILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ + N L H ++C + D ++T S D T +WD +T GHT
Sbjct: 174 SPDPNFT----LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Query: 797 GDV 805
+V
Sbjct: 230 HNV 232
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+TL GH + A+ + + +++ S+DG + +W + T + + V Y S
Sbjct: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 569 GSYVACG 589
V G
Sbjct: 283 SRRVVIG 289
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +2
Query: 242 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 412
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 413 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 586
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 587 GGLDNICSIYSLK 625
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +2
Query: 242 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 412
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 413 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 586
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 587 GGLDNICSIYSLK 625
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Frame = +2
Query: 365 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD-SHTTNKVHAIPLRSS 538
G + +R + +GH+ + W ++ V ++S+DG L +WD ++ ++ I + +
Sbjct: 264 GDMYIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLA 323
Query: 539 W-----VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 703
V TCA+ G +A G D I+SLK G+ H+ ++ +F
Sbjct: 324 RPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSS 383
Query: 704 DNQILTS-SGDMTCALWDI 757
D +IL S S D + +WD+
Sbjct: 384 DGRILLSRSFDGSLKVWDL 402
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW----DSHTTNKVHAIPLRSSWVMTCAY 559
TL GH K+ ++ + D+ +++AS D + +W D + T++ H + S+ V
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR-HTLKDHSAEVRAVTV 317
Query: 560 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDM 736
+ Y LD+ Y L + +V+ Y + F D IL T +
Sbjct: 318 HATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNY-TAAAFHPDGLILGTGTAQS 376
Query: 737 TCALWDIETGQQCGQFTGHTGDV 805
+WD+++ +F GH G++
Sbjct: 377 IVKIWDVKSQANVAKFGGHNGEI 399
Score = 36.3 bits (80), Expect = 0.025
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +2
Query: 383 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT---C 553
+R TL+ H A++ A+ + ++ VSAS D +D + + + S +
Sbjct: 301 SRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAA 360
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 733
A+ P G + G +I I+ +K+ + NV + GH+G ++ F ++ L ++
Sbjct: 361 AFHPDGLILGTGTAQSIVKIWDVKS-QANVA---KFGGHNGEITSISFSENGYFLATAAL 416
Query: 734 MTCALWDI 757
LWD+
Sbjct: 417 DGVRLWDL 424
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 560 APSGSYVACGGLDNICSIYSLK 625
P YVA D C IY+ K
Sbjct: 104 DPLAKYVASLSSDRTCRIYANK 125
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 560 APSGSYVACGGLDNICSIYSLK 625
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 559
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 560 APSGSYVACGGLDNICSIYSLK 625
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +2
Query: 458 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA--YAP-SGSYVACGGLDNICSIYSLKT 628
S S DG + +WD + C+ + P GS +A G D +Y ++
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRR 244
Query: 629 REGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQ-FTGH 793
+ V L GH+ ++ RF+D + I+T S D + WDI+ G++ + + GH
Sbjct: 245 LVDPLIV---LDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGH 297
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
++R K+ H+ SD + L SA D K ++W + T + ++ + ++PS
Sbjct: 646 SVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQ 705
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDMTCA 745
+A D ++ + ++R GHS ++ F + D+ I + D
Sbjct: 706 LRLATSSFDKTVRVWDADNKGYSLRT---FMGHSSMVTSLDFHPIKDDLICSCDNDNEIR 762
Query: 746 LWDIETG 766
W I G
Sbjct: 763 YWSINNG 769
Score = 33.1 bits (72), Expect = 0.23
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRT-RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 508
LA +++NL + ++ + R +L+GH I ++ W L S S+D + VW T +
Sbjct: 792 LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGS 850
Query: 509 K---VHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 679
+ VH + + +C + P+ + G ++++ + + LP H G
Sbjct: 851 EGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENK-----TMTLPAHEGL 905
Query: 680 LSCCRFLDDNQILTS-SGDMTCALW 751
++ ++ S S D LW
Sbjct: 906 ITSLAVSTATGLVASASHDKLVKLW 930
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +2
Query: 458 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREG 637
S+ D VWD T + V++ ++P+G ++A GG DN C I+ L+ R
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR-- 204
Query: 638 NVRVSRELPGHSGYLSCCRFLDDNQ--ILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
++ +P H +S ++ + + T+S DM +W GH V
Sbjct: 205 --KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 338 QATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
+A+S + + R+ +RT R + +GH+ ++ ++ + + +L S +D + +WD
Sbjct: 145 KASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR 204
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSY-VACGGLDNICSIYS 619
++ IP + V Y P Y +A D +I+S
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-----TTNKVHAIPLRSSWVMTCAY 559
L+GH + A + D ++ +D + +W+ H T K H +R V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVT---- 69
Query: 560 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DM 736
+ + + +CGG D +Y G RV R+ GH G ++ +F D + ++ S+G D
Sbjct: 70 SDNAKFCSCGG-DR--QVYYWDVSTG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDR 124
Query: 737 TCALWD 754
+ +WD
Sbjct: 125 SLRVWD 130
Score = 43.6 bits (98), Expect = 2e-04
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTC 553
R R RGH ++ A+ + S +VSA D L VWD SH+ V I VM+
Sbjct: 93 RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV 152
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY-LSCCRFLDD-NQILTSS 727
+ + + G +D R ++R+ RE+ + G ++C +D N +L
Sbjct: 153 VL--TKTEIIGGSVDG-------TVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGC 203
Query: 728 GDMTCALWDIETGQQCGQFTGH 793
D T L D TG+ + GH
Sbjct: 204 LDSTLRLLDRTTGELLQVYKGH 225
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 701 DDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
D+ + + GD WD+ TG+ +F GH G+V
Sbjct: 71 DNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV 105
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+T + H ++ +H SD+ S D ++ WD T + V + S
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 569 GSYVACGGLDNICSIYSLKT 628
S V G D ++ ++
Sbjct: 114 SSVVVSAGFDRSLRVWDCRS 133
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 43.6 bits (98), Expect = 2e-04
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Frame = +2
Query: 356 EPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR 532
+P +Q M+ + LRGH +Y R +++ S D + VW T + +
Sbjct: 227 KPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Query: 533 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL---- 700
+ A + + ++A D + ++ L + VS L GH+G ++ F
Sbjct: 287 EGDITDLAVSSNNIFIASASNDCVIRVWRLPD---GLPVS-VLRGHTGAVTAIAFSPRPG 342
Query: 701 DDNQILTSSGDMTCALWDIETGQ 769
Q+L+SS D TC +WD Q
Sbjct: 343 SPYQLLSSSDDGTCRIWDARGAQ 365
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+L GH A Y M + R +SA DGK IVWD + + ++ ++P
Sbjct: 581 SLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPD 640
Query: 569 GSYVACGGLDNICSIYSLKTREGN 640
G+ + D++ +Y L T +G+
Sbjct: 641 GTSIILS--DDVGQLYILSTGQGD 662
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 653 RELPGHSGYLSCCRFLDDN--QILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
+ L GH + C LD + ++T S D +W ++T GH GD+
Sbjct: 239 KRLRGHRNAVYCA-ILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDI 290
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 43.6 bits (98), Expect = 2e-04
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +2
Query: 437 SDSRNLVSASQ-DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSI 613
S + +LV+ DG + +WD+ V Y GS +A G DN +
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIIL 132
Query: 614 YSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCALWDIETGQQCGQF-T 787
+ + G R L GH ++ FLD + +++SS D +WD+ET Q C Q +
Sbjct: 133 WDVVGESGLFR----LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET-QHCMQIVS 187
Query: 788 GHTGDV 805
GH +V
Sbjct: 188 GHHSEV 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
LRGH ++ + + + LVS+S+D L VWD T + + + S V + P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 575 YVACGGLDNICSIYSLKTREGN 640
YV G D Y++K N
Sbjct: 204 YVVTGSADQELRFYAVKEYSSN 225
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 551 CAYAPSGSY--VACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 724
C AP S +A +N YSLK+ E V+ E GH + +DN +L S
Sbjct: 364 CPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMS 423
Query: 725 SGDMTCALWDIETG 766
+ +W+ TG
Sbjct: 424 TSHSEVKIWNPSTG 437
Score = 31.5 bits (68), Expect = 0.70
Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 2/177 (1%)
Frame = +2
Query: 230 TRVSIMNELDSLRQEAETLKNAIR-DARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGH 406
T+ ++ + S++ + L AI DA+ A +A S ++ ++ +L GH
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIA----VALLDSTVKVFYMDSLKFYLSLYGH 581
Query: 407 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVAC 586
+ + SD +V+ SQD L +W + +I VM + + Y+
Sbjct: 582 KLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFS 641
Query: 587 GGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWD 754
G D + + E + L GH + C + L T S D + WD
Sbjct: 642 IGKDRLVKYWDADKFEHLL----TLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = +2
Query: 374 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 553
+M+ + LRGH +Y + R +++ S D + +W T + + +
Sbjct: 294 KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDL 353
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN----QILT 721
A + + + VA D + ++ L + +S L GH+G ++ F Q+L+
Sbjct: 354 AVSSNNALVASASNDFVIRVWRL---PDGMPIS-VLRGHTGAVTAIAFSPRQASVYQLLS 409
Query: 722 SSGDMTCALWDIETGQ 769
SS D TC +WD Q
Sbjct: 410 SSDDGTCRIWDARYSQ 425
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 653 RELPGHSGYLSCCRF-LDDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
++L GH + C F ++T S D +W +ET GH GD+
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDI 350
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
L GH Y + + R +SA DGK I+WD + + ++ ++ G
Sbjct: 635 LTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDG 694
Query: 572 SYVACGGLDNICSIYSLKTREG 637
+ + D++ IY L T +G
Sbjct: 695 TSIVLS--DDVGQIYFLNTGQG 714
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
T GH +++ ++ SAS D +W++ T +++H+ V CA++
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDT 109
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL-DDNQILTSSGDM-TCA 745
+ GG++ I I+ L + +E+ G + +L DN IL+S D
Sbjct: 110 HRLLTGGMEKILRIFDLNRPDA---PPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIR 166
Query: 746 LWDIET 763
LWDI +
Sbjct: 167 LWDIRS 172
Score = 32.3 bits (70), Expect = 0.40
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = +2
Query: 416 IYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 592
I + W SD+ L S + G + +WD + VH + +S V + + G Y+
Sbjct: 143 IRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGRYITTA- 200
Query: 593 LDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQ 772
+ S+ + + S ++P + S N + DM +D +TG++
Sbjct: 201 --DGSSVKFWDAKNFGLLKSYDMPCNVESASL-EPKHGNTFIAGGEDMWVHRFDFQTGEE 257
Query: 773 CGQFTGHTGDV 805
G GH G V
Sbjct: 258 IGCNKGHHGPV 268
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM-TCAYAPSGSYV 580
HL + + + ++R V++S D L VW+ + I M + + P+G+++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 581 ACGGLDNICSIYSLKTREGNVRVSRELPGH--SGYLSCCRFLDDNQ-ILTSSGDMTCALW 751
A LDN IYS + R + + GH +GY F D + +++ G+ C W
Sbjct: 471 AAQSLDNQILIYSTRER-FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 529
Query: 752 D 754
D
Sbjct: 530 D 530
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWV 544
I R T GH + A+ + L+SA D K+ +WD + + K + + V
Sbjct: 270 IPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAV 329
Query: 545 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ--IL 718
++ GS G D + +T G V +S G Y+ DD Q +L
Sbjct: 330 RDICFSNDGSKFLTAGYDKNIKYWDTET--GQV-ISTFSTGKIPYVVKLNPDDDKQNILL 386
Query: 719 TSSGDMTCALWDIETGQQCGQFTGHTGDV 805
D WDI TG+ ++ H G V
Sbjct: 387 AGMSDKKIVQWDINTGEVTQEYDQHLGAV 415
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAP 565
RT GH + + + +D ++A D + WD+ T + + +V+
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 566 SGSYVACGGL-DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMT 739
+ G+ D + + T E V++E H G ++ F+D+N+ +TSS D +
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGE----VTQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 435
Query: 740 CALWD 754
+W+
Sbjct: 436 LRVWE 440
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 653 RELPGHSGYL-SCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDVMVAV 817
R GH+ + C D ++ LT+ D WD ETGQ F+ TG + V
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFS--TGKIPYVV 373
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 529
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 253 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 312
Query: 530 RSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
+S V A+ P + +A GG +I T G + S S ++
Sbjct: 313 HTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTG--ACLNSVDTGSQVCSLLWSKNE 370
Query: 707 NQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
++L+S G LW + + + TGHT V+
Sbjct: 371 RELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVL 406
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +2
Query: 416 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP-LRSSWVMTCAYAPSGSYVACGG 592
+ +++W D R++ + ++ +WDS + ++ + S V + A+ + + GG
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGG 242
Query: 593 LDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 754
+D + ++ R V R GH+ + ++ Q L S G D +WD
Sbjct: 243 MDGLIINNDVRIRSPIVETYR---GHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 529
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 243 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 302
Query: 530 RSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
+S V A+ P + +A GG +I T G + S S ++
Sbjct: 303 HTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTG--ACLNSVDTGSQVCSLLWSKNE 360
Query: 707 NQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
++L+S G LW + + + TGHT V+
Sbjct: 361 RELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVL 396
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +2
Query: 416 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP-LRSSWVMTCAYAPSGSYVACGG 592
+ +++W D R++ + ++ +WDS + ++ + S V + A+ + + GG
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGG 232
Query: 593 LDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 754
+D + ++ R V R GH+ + ++ Q L S G D +WD
Sbjct: 233 MDGLIINNDVRIRSPIVETYR---GHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQ-DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
T GH ++YA+ LV+ D K +W + +P V A++
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQI-LTSSGDMTCA 745
G +A GGLD + I+ + G ++ + PG + R+ I L S D +
Sbjct: 125 GQLLASGGLDGVVQIFDASS--GTLKCVLDGPGAG--IEWVRWHPRGHIVLAGSEDCSLW 180
Query: 746 LWDIETGQQCGQFTGHTGDV 805
+W+ + F+GH +V
Sbjct: 181 MWNADKEAYLNMFSGHNLNV 200
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPS-GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 682
+ VH + A +P+ + VA GG D+ ++ + GN + ELPGH +
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKI----GNGDWAAELPGHKDSV 116
Query: 683 SCCRFLDDNQILTSSG-DMTCALWDIETG 766
SC F D Q+L S G D ++D +G
Sbjct: 117 SCLAFSYDGQLLASGGLDGVVQIFDASSG 145
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI---PLRSSWVMTCAYAPSG 571
GH + + D + + + S D LIVW+ T +H + P + +TC S
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG-LTCLDINSN 253
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL----TSSGDMT 739
S +A G + S++ + G +V L H+ + C +F + + T D
Sbjct: 254 SSLAISGSKD-GSVHIVNIVTG--KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKK 310
Query: 740 CALWDIE 760
+WD++
Sbjct: 311 LIIWDLQ 317
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 550
+Q T R + H + ++ W S+ L + +G + +WDS N VH V
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQA 375
Query: 551 CAYAPSGSYVACGGLDNICSIY 616
+ + + ++ +DN ++
Sbjct: 376 ISVSTNTDFIVSVSVDNTARVF 397
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 748
+ GG + I ++ + + + PG L+ D IL+S D+ L
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLH--SDQTILSSCTDIGGVRL 172
Query: 749 WDIETGQ 769
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 748
+ GG + I ++ + + + PG L+ D IL+S D+ L
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLH--SDQTILSSCTDIGGVRL 172
Query: 749 WDIETGQ 769
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 42.3 bits (95), Expect = 4e-04
Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNL-VSASQDGKLIVW--DSHTTNKVHAIPLRSSWVMTC------ 553
GH I A+ + S + VS S D L VW D + + I L++ V+
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 554 --AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTS 724
A A + S V G D SI+ L V L GH + F +Q ++T+
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVT----LKGHKRRIFSVEFSTVDQCVMTA 559
Query: 725 SGDMTCALWDIETGQQCGQFTGHTGDVMVA 814
SGD T +W I G F GHT V+ A
Sbjct: 560 SGDKTVKIWAISDGSCLKTFEGHTSSVLRA 589
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/82 (21%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL+GH +I+++ + + + +++AS D + +W + + +S V+ ++ G
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 572 S-YVACGGLDNICSIYSLKTRE 634
+ +V+CG D + ++++ T E
Sbjct: 596 TQFVSCGA-DGLLKLWNVNTSE 616
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+T GH + + + +D VS DG L +W+ +T+ + V A
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 569 GSYVACGGLDNICSIY 616
+A GG D + +++
Sbjct: 637 TEMIATGGGDAVINLW 652
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCA 745
GS++AC D I + S + V + G S L+ D+++L S+G
Sbjct: 31 GSFIACACGDVINIVDSTDSS-----VKSTIEGESDTLTALALSPDDKLLFSAGHSRQIR 85
Query: 746 LWDIETGQQCGQFTGHTGDVM 808
+WD+ET + + GH G VM
Sbjct: 86 VWDLETLKCIRSWKGHEGPVM 106
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
R+ +GH + M + L +A D K++VWD H V + + P
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 569 G--SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMT 739
+ + G D ++ L + + + H ++ +D L S+G D
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 740 CALWDI 757
LWD+
Sbjct: 216 VNLWDL 221
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 713 ILTSSGDMTCALWDIETGQQCGQFTGHTGDVMVAVA 820
I+T S D T LW+ + G TGH GD++ AVA
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDIL-AVA 453
Score = 29.5 bits (63), Expect = 2.8
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Frame = +2
Query: 437 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 616
SD + A D IV DS ++ I S + A +P + G ++
Sbjct: 29 SDGSFIACACGDVINIV-DSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVW 87
Query: 617 SLKTREGNVRVSRELPGHSG-YLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTGH 793
L+T ++ R GH G + + T+ D +WD++ G F GH
Sbjct: 88 DLET----LKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH 143
Query: 794 TGDV 805
G V
Sbjct: 144 KGVV 147
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 42.3 bits (95), Expect = 4e-04
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRN-------LVSASQDGKLIVWDSHT-----TNKVHAIPLRSS 538
L GH +++++ W S + L S S D + +W+ + T K +
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 539 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 718
V +CA++PSG +A D I+ K L GH + + L
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIW--KNYGSEFECISTLEGHENEVKSVSWNASGSCL 133
Query: 719 -TSSGDMTCALWDIETGQQ--CGQ-FTGHTGDV 805
T S D + +W++ G + C TGHT DV
Sbjct: 134 ATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDV 166
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/139 (19%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL---RSSWVMTCAYA 562
TL GH ++ ++ W + L + S+D + +W+ N+ + + V +
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 563 PSGSYVACGGLDNICSIYSLKTREGNVRVSREL----PGHSGYLSCCRF-LDDNQILTSS 727
P+ + DN ++ + +G + + L GHS + F ++++T S
Sbjct: 173 PTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCS 232
Query: 728 GDMTCALWDIETGQ-QCGQ 781
D+T +W + + Q G+
Sbjct: 233 DDLTLKIWGTDIAKMQSGE 251
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQIL 718
V + + P+ S + GG D + ++ TR G S L GH + ++ + N +L
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWD--TRSGRELCS--LHGHKNIVLSVKWNQNGNWLL 326
Query: 719 TSSGDMTCALWDIETGQQCGQFTGHTGDV 805
T+S D L+DI T ++ F GHT DV
Sbjct: 327 TASKDQIIKLYDIRTMKELQSFRGHTKDV 355
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
+L + I + W R L++ SQ G+ +W+ + N + + + ++ +
Sbjct: 118 SLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNE 177
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHS-GYLSCCRFLDDNQILTSSGDMTCAL 748
+Y+ G D+ ++ + NV+ ++ S LS C+ D + + S D T +
Sbjct: 178 NYMVSG--DDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCK--TDLKFCSCSDDTTVKV 233
Query: 749 WDIETGQQCGQFTGHTGDVMVAV 817
WD TG+ G ++ +
Sbjct: 234 WDFTKCVDESSLTGYIGKGVIEI 256
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/76 (19%), Positives = 38/76 (50%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH + ++ W LVS +D + +WD+ + ++ ++ + V++ + +G+++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 581 ACGGLDNICSIYSLKT 628
D I +Y ++T
Sbjct: 326 LTASKDQIIKLYDIRT 341
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTCAYAPSG 571
L H I + + D SA + + +VWD + K+ + S+ + A++P+
Sbjct: 487 LERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNS 546
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 751
+ VA G LD +Y + + + R++ + H G + F DD+ +++S D +W
Sbjct: 547 TMVATGSLDTCVIVYEVD-KPASSRMTIK-GAHLGGVYGLGFADDSHVVSSGEDACIRVW 604
Score = 34.7 bits (76), Expect = 0.075
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 533 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN- 709
S++V +AP GS D IY KT E +S + GH G + + D
Sbjct: 187 SNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSD-DGHKGSIYAVSWSPDGK 245
Query: 710 QILTSSGDMTCALWDI 757
Q+LT S D + +WDI
Sbjct: 246 QVLTVSADKSAKIWDI 261
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 493
GH IYA+ W D + +++ S D +WD
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Frame = +2
Query: 485 VWDSHTTNKVHAIPLRSSW---VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSR 655
VWD T L S + V ++P G + +I IYS E ++R
Sbjct: 400 VWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGE-DLRNHL 458
Query: 656 ELPGHSGYLSCCRFLDDNQ---ILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
E+ H+G ++ F NQ ++T D T +WD TG + F GH V
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Frame = +2
Query: 485 VWDSHTTNKVHAIPLRSSW---VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSR 655
VWD T L S + V ++P G + +I IYS E ++R
Sbjct: 400 VWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGE-DLRNHL 458
Query: 656 ELPGHSGYLSCCRFLDDNQ---ILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
E+ H+G ++ F NQ ++T D T +WD TG + F GH V
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
RT GH + AM W SDS L++ +D + I W++ T V +P +W + P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 566 S-GSYVACGGLDNICSIYSLK 625
++ +D IY+L+
Sbjct: 306 KMPGVISASSVDGKIGIYNLE 326
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +2
Query: 566 SGSYVACGGLDNICSIYS-LKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDM 736
S +A G +D +++ + + G + R+L H G + F NQ+ + + D
Sbjct: 79 SDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDG 138
Query: 737 TCALWDIETGQQCGQFTGHTGDVM 808
T +WD+ + + TG M
Sbjct: 139 TVCIWDLANPSKPSHYLKGTGSYM 162
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TLRGH A + ++W D L S S D + +W+ T + S V + P G
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 572 SYVACGGLDNICSIY 616
S++A D I+
Sbjct: 173 SFIASQSDDKTVIIW 187
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPLRSSWVMTCA 556
LRGHL+ + + W + S S D +I+W +H T+ A L S++
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLG 215
Query: 557 YAPSGSYV 580
++P G ++
Sbjct: 216 WSPCGHFL 223
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 563 PSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS-SGDMT 739
P+G A GG D+ L+ + R+ L H G ++C R+ +++ + S S D
Sbjct: 23 PNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQV 82
Query: 740 CALWDIETGQQCGQF-TGHTGDV 805
+ + + G +F +G DV
Sbjct: 83 IQIHERKPGSGTTEFGSGEAPDV 105
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 733
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 734 MTCALWDIET 763
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIETGQQCGQFTGHTGDV 805
+ GH L+ R+ + +L S D T LW + G++ G + GH G V
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAV 55
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 733
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 734 MTCALWDIET 763
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIETGQQCGQFTGHTGDV 805
+ GH L+ R+ + +L S D T LW + G++ G + GH G V
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAV 55
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 733
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 734 MTCALWDIET 763
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIETGQQCGQFTGHTGDV 805
+ GH L+ R+ + +L S D T LW + G++ G + GH G V
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAV 55
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 685
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 499 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 554
Query: 686 CCRFLDDN-QILTSSGDMTCALWDI-ETGQQCGQFTGHTGDVM 808
RF ++ Q+ TSS D T +WD + G +GH VM
Sbjct: 555 DVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVM 597
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 706
Query: 506 NKVHAIPLRSSWVMTCAYAPS 568
+ +H + + + + PS
Sbjct: 707 DCIHELSNSGNKFHSVVFHPS 727
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 685
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 686 CCRFLDDN-QILTSSGDMTCALWDI-ETGQQCGQFTGHTGDVM 808
RF ++ Q+ TSS D T +WD + G +GH VM
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVM 599
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 506 NKVHAIPLRSSWVMTCAYAPS 568
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 685
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 686 CCRFLDDN-QILTSSGDMTCALWDI-ETGQQCGQFTGHTGDVM 808
RF ++ Q+ TSS D T +WD + G +GH VM
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVM 599
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 506 NKVHAIPLRSSWVMTCAYAPS 568
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 685
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 686 CCRFLDDN-QILTSSGDMTCALWDI-ETGQQCGQFTGHTGDVM 808
RF ++ Q+ TSS D T +WD + G +GH VM
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVM 599
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 506 NKVHAIPLRSSWVMTCAYAPS 568
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 506 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 685
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 686 CCRFLDDN-QILTSSGDMTCALWDI-ETGQQCGQFTGHTGDVM 808
RF ++ Q+ TSS D T +WD + G +GH VM
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVM 599
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 505
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 506 NKVHAIPLRSSWVMTCAYAPS 568
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 398 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
R H+ + I ++ + +D L + +DG L ++D T V + ++ CA++ G
Sbjct: 298 RWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDG 357
Query: 572 SYVACGGLDNICSIYSLKTRE 634
Y+ GG D++ ++S++ R+
Sbjct: 358 KYLLTGGEDDLVQVWSMEDRK 378
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQIL 718
+ + A++ G+Y+A G D I+ T+ ++ + + G L CC + +D +L
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQ----KLVCGVKSYYGALLCCAWSMDGKYLL 361
Query: 719 TSSGDMTCALWDIETGQQCGQFTGH 793
T D +W +E + GH
Sbjct: 362 TGGEDDLVQVWSMEDRKVVAWGEGH 386
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +2
Query: 437 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 616
S S L++A+ D K+ V+D+ + +V L S V + +P G +A G C I
Sbjct: 217 SGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDGKLLAVVGDSTECLIS 275
Query: 617 SLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDI 757
+ G V S L GH Y + + IL T + D C LWDI
Sbjct: 276 D--SHSGKVISS--LRGHKDYSFASAWHPNGLILATGNQDTACRLWDI 319
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Frame = +2
Query: 419 YAMHWGSDSRNLVSASQDGKLI----------VWDSHTTNKVHAIPLRSSWVMTCAYAPS 568
+A+ W S N S S DGKL+ + DSH+ + ++ + A+ P+
Sbjct: 245 FALDW---SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPN 301
Query: 569 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 718
G +A G D C ++ ++ + V L G+ G + +F + + L
Sbjct: 302 GLILATGNQDTACRLWDIRNPSESFAV---LKGNMGAIRGLKFTPEGRFL 348
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Frame = +2
Query: 536 SWVMTCAYAPSGSYVACGGLD-NI-CSIYSLKTREGNVRVSRELPGHSGYLSCCRF---- 697
S + + ++P G Y+ D I +++ K EG + GHS +++C F
Sbjct: 156 SIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTP 215
Query: 698 -LDDNQILTSSGDMTCALWDIETG 766
L +++ SGD T LWDI +G
Sbjct: 216 ELTQGYLMSGSGDSTVRLWDITSG 239
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW----DSHTTNKVHAIPLRS 535
+I +T + L H +++ + + + + L S+S+D I+W D H + K H +
Sbjct: 261 QIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLK-HTLVGHH 319
Query: 536 SWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQI 715
V+ ++P V G + + + + + G+ E G S +SC + D I
Sbjct: 320 KPVIAILWSPDDRQVLTCGAEEVIRRWDVDS--GDCVHMYEKGGISP-ISCGWYPDGQGI 376
Query: 716 LTSSGDMTCALWDIE-TGQQC--GQFTGHTGDV 805
+ D + +WD++ ++C GQ T D+
Sbjct: 377 IAGMTDRSICMWDLDGREKECWKGQRTQKVSDI 409
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Frame = +2
Query: 470 DGKLIVWDSHTTNKVHAIPLRSSWVMTC--------AYAPSGSYVACGGLDNICSIYSLK 625
D L ++ H K H IP +++ ++ ++ +G Y+A D I+ +
Sbjct: 246 DSDLSLYSDHQCGK-HQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIS 304
Query: 626 TREGNVRVSRELPGH-SGYLSCCRFLDDNQILTSSGDMTCALWDIETG 766
+G++ + L GH ++ DD Q+LT + WD+++G
Sbjct: 305 A-DGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG 351
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN--QI 715
+ +C +++A G D+ I+ T G + V ELPGH+G ++C + N +
Sbjct: 492 IRSCFGGYKQAFIASGSEDSQVYIWHRST--GKLIV--ELPGHAGAVNCVSWSPTNLHML 547
Query: 716 LTSSGDMTCALWDIETGQQCGQ 781
++S D T +W ++ Q Q
Sbjct: 548 ASASDDGTIRIWGLDRINQQNQ 569
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D + LVS +D + ++D T V + + + + + Y+ L+ +++
Sbjct: 414 DGKWLVSVCKDSVISLFDREAT--VERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWN 471
Query: 620 LKTREGNVRVSRELPGH--SGYL--SCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFT 787
+ EG+ ++ GH S ++ SC I + S D +W TG+ +
Sbjct: 472 I---EGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELP 528
Query: 788 GHTGDV 805
GH G V
Sbjct: 529 GHAGAV 534
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLKT 628
L S S D + +W+ + N + I ++ V ++P S++ A G D Y L+
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLR- 869
Query: 629 REGNVRVSR-ELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIE 760
N+R L GH+ +S +FLD+ ++T+S D T LWD++
Sbjct: 870 ---NLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLK 911
Score = 27.9 bits (59), Expect = 8.6
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Frame = +2
Query: 431 WGSDSRNLVSASQDG-----KLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGL 595
W SD R V A DG + +++ + + S+ + + + Y A G+
Sbjct: 667 WSSDDR--VGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGV 724
Query: 596 DNICSIY---SLKTREGNVRVSR-ELPGHSGYLSCC-RFLDDNQILTSSGDMTCALWDIE 760
IY SL ++ E+P S C N + +S D LWD+
Sbjct: 725 SKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVT 784
Query: 761 TGQQCGQFTGH 793
TGQ F H
Sbjct: 785 TGQAISHFIEH 795
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 704 DNQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
D+ +LT+SGD T +WD+E + G GHTG V
Sbjct: 140 DSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTV 173
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 733
+ P + GG D I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK-LLKQSDEEVGHKEAITSLCKAADDSHFLTGSHD 241
Query: 734 MTCALWDIET 763
T LWD+ T
Sbjct: 242 KTAKLWDMRT 251
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIETGQQCGQFTGHTGDV 805
+ GH L+ R+ + +L S D T +W + G++ G + GH+G V
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAV 82
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 39.5 bits (88), Expect = 0.003
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 341 ATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA 520
A ++++ + +T T GH A + + D+ LV+ S+D +++W H K
Sbjct: 2646 ADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH---KAFT 2702
Query: 521 IPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR-EGNVRVSRELPGHSGYLSCCRF 697
S T + APS + + L N + K R EG ++V R GH L CC
Sbjct: 2703 SRTSVSEPSTGSGAPSST--SNTNLANTLANKGKKCRLEGPIQVLR---GHRRELVCCCV 2757
Query: 698 LDDNQILTSSGDMT-CALWDIETGQQCGQFTGHTGD 802
D ++ SS + + L I G+ + G D
Sbjct: 2758 SSDQGVVVSSSESSDVLLHSIRKGRLIRRLVGVKAD 2793
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
L GH + ++ + D R L S S DG + + D+ + ++ +SWV++ +P G
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 572 SYVACGGLDNICSIYSLKTR 631
+A G D ++ LK R
Sbjct: 256 GAIATGSSDRTVRLWDLKMR 275
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 539 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQ 712
+V++ A++P+G +ACG +D ++ + ++ +L GH+ + F +D
Sbjct: 160 FVLSVAWSPNGKRLACGSMDGTICVFDV----DRSKLLHQLEGHNMPVRSLVFSPVDPRV 215
Query: 713 ILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
+ + S D + D E G +GHT V+
Sbjct: 216 LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVL 247
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 556
TL GH ++ + W L S S DG++I+W N + H V + A
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 557 YAPS--GSYVACGGLDNICSIYSLKTREG 637
+AP G +ACG D S++S + G
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGG 139
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 556
TL GH ++ + W L S S DG++I+W N + H S V + A
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 557 YAPS--GSYVACGGLDNICSIYSLKTREG 637
+AP G +ACG D S+++ + G
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGG 139
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +2
Query: 284 LKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIY--AMHWGSDSRNLV 457
++N + +A +S TS +P G I M+ R ++ A G +
Sbjct: 579 MENTVDNASSGTASSSQNDRTS-YQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIA 637
Query: 458 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYA-PSGSYVACGGLDNICSIYS 619
S S DG+ +W+ T ++ + + V+ C P S VA G+DN I+S
Sbjct: 638 SGSDDGRWFIWEKQ-TGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 691
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 374 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 523
++ + L GH + A+ W S+ L+S S D ++ +W+ + +H+I
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSI 88
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 398 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
R H+ + I ++ + +D +L + +DG L ++D T V ++ C+++ G
Sbjct: 298 RWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDG 357
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 709
Y+ GG D++ ++S++ R +V GH+ ++S F D N
Sbjct: 358 KYILTGGEDDLVQVWSMEDR----KVVAWGEGHNSWVSGVAF-DSN 398
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQIL 718
+ + A++ G+++A G D I+ T+ ++ + G L CC + +D IL
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQ----KLVCGGKSYYGALLCCSWSMDGKYIL 361
Query: 719 TSSGDMTCALWDIETGQQCGQFTGH 793
T D +W +E + GH
Sbjct: 362 TGGEDDLVQVWSMEDRKVVAWGEGH 386
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 37.9 bits (84), Expect = 0.008
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = +2
Query: 461 ASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTRE 634
+S D L+ S V +++ + C PS G +A G D+ +Y R
Sbjct: 635 SSADPTLLASGSDDGTGVSIGTIKTKANVCCVQFPSDSGRSLAFGSADH--KVYYYDLRN 692
Query: 635 GNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETG------QQCGQFTGHT 796
+ + + GHS +S +F+D + +++SS D T LWD+ FTGHT
Sbjct: 693 PKIPLCTMI-GHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHT 751
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMT-----C 553
T+ GH + + + DS LVS+S D L +WD S + + ++ PL S T
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV 757
Query: 554 AYAPSGSYVACGGLDNICSIY 616
+ S Y+A G N +Y
Sbjct: 758 GLSVSDGYIATGSETNEVFVY 778
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +2
Query: 350 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH--AI 523
NL IQ +L G + ++Y++ G+D L + +QDG ++VW ++T A
Sbjct: 204 NLVKAWNIQNNADLSLNGPVGQVYSLVVGTDL--LFAGTQDGSILVWRYNSTTSCFDPAA 261
Query: 524 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 703
L + + + + G +DN ++SL N++ + L H+ +
Sbjct: 262 SLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSL----DNLQCIQTLTEHTSVVMSL-ICW 316
Query: 704 DNQILTSSGDMTCALWDIETG 766
D +L+ S D T +W G
Sbjct: 317 DQFLLSCSLDNTVKIWAATEG 337
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Frame = +2
Query: 488 WDSHTTNKVHAIPLRSSWV-------MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVR 646
W S K H + + SW + A + G Y+A GG+D ++ ++TRE +V+
Sbjct: 184 WPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTRE-HVQ 242
Query: 647 VSR------------ELPGHSGYLSCCRFLDDN-QILTSSGDMTCALWDIETGQQCGQFT 787
V++ GH G +S F + ++ + S D T ++W+ E
Sbjct: 243 VNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCF 302
Query: 788 GHTGDVM 808
GH +++
Sbjct: 303 GHQSELL 309
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
GH + ++ + + L S S DG L +W++ + + S +++ A V
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 581 ACGGLDNICSIYS--LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 754
G D +Y + E + R + CC F++ ++ L+ S + + ALW
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYRASESN---FECCCFVNSDEFLSGSDNGSIALWS 376
Query: 755 I 757
I
Sbjct: 377 I 377
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 350 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 529
+L PIG +Q L G +H + ++ SQ+G L +W+ +T ++
Sbjct: 126 HLAPIGNLQ------LTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKG 179
Query: 530 RSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 709
S V +C +P+ VA G D ++++K E V G ++ F D
Sbjct: 180 WGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEH---ASRGAVTALSFSTDG 236
Query: 710 QILTSSGDM--TCALWDI 757
+ L +SG ++W++
Sbjct: 237 RPLLASGGSFGVISIWNL 254
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +2
Query: 416 IYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAI-PLRSSWVMTCAYAPSGSYVACG 589
+ A+ + +D R L+ S G + +W+ + I S +++ + + +
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSA 286
Query: 590 GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIETG 766
DN ++ T +G+ R+ R GHS C RF + + + S+G D L+ +
Sbjct: 287 SADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQE 346
Query: 767 QQ 772
QQ
Sbjct: 347 QQ 348
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 493
+ ++ R RGH +I + + D + ++S+S DG L +WD
Sbjct: 545 VTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 365 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 517
GR+ ++ +L GH +++ M W L S DG + +W S+ + H
Sbjct: 266 GRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 316
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS--CCRFLDDNQI 715
V + A+ +G+ +A G +D I++++ + EL GH+ + C + +
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLV 82
Query: 716 LTSSGDMTCALWDIETGQQCGQFTGHTGD 802
T+SGD + LWD +G +C Q +G+
Sbjct: 83 ATASGDKSVRLWDARSG-KCTQQVELSGE 110
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW--DSHTTNKVHAIPLR 532
R +GH K++++ W S+ L S S D +W + H +K + L+
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELK 63
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 542 VMTC-AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 718
V+ C A+ GS +A G D C I+ +TR G + R+ + S +++L
Sbjct: 25 VIKCVAFNHRGSLLAAGCADGGCVIWDFETR-GIAKEIRDNDCSAAITSVSWSKYGHRLL 83
Query: 719 TSSGDMTCALWDIETGQQ 772
S+ D + LWD+ TG++
Sbjct: 84 VSAADKSLTLWDVSTGEK 101
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL GHL I + + ++ +VSAS D + +W+ + + + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 572 SYVACGGLDNICSIYSL 622
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 34.7 bits (76), Expect = 0.075
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G + +WD + V + S GG D +++ KT
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
R L GH Y+ +F +N I+++S D T +W+ ++ TGH VM
Sbjct: 84 ----RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
Query: 809 VA 814
A
Sbjct: 140 CA 141
Score = 31.9 bits (69), Expect = 0.53
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 700
+ +A G DN ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DNGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ---ILTSS 727
++P GS +I +YS E ++R E+ H G ++ F N+ ++T
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGE-DMRQHLEIDAHVGGVNDISFSTPNKQLCVITCG 483
Query: 728 GDMTCALWDIETGQQCGQFTGHTGDV 805
D T +WD TG + F GH V
Sbjct: 484 DDKTIKVWDAATGVKRHTFEGHEAPV 509
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ---ILTSS 727
++P GS +I +YS E ++R E+ H G ++ F N+ ++T
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGE-DMRQHLEIDAHVGGVNDISFSTPNKQLCVITCG 483
Query: 728 GDMTCALWDIETGQQCGQFTGHTGDV 805
D T +WD TG + F GH V
Sbjct: 484 DDKTIKVWDAATGVKRHTFEGHEAPV 509
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.9 bits (79), Expect = 0.032
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 580
H + I A W S +L+SAS DGK+++WD T + I + V++ + G V
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESV 415
Query: 581 ACGGLDNICSIYS 619
GG D+ I S
Sbjct: 416 VSGGADSNLRISS 428
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQ 769
L GH+ +S + + + I +SS D + WD+ETG+
Sbjct: 268 LVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGK 304
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW--VMTC 553
+T TL GHL +A W D + +QD VWD +K A+ LR + + +
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAV-LRGNLGAIRSI 366
Query: 554 AYAPSGSYVACGGLDNICSIYSL 622
Y G Y+A + +Y +
Sbjct: 367 RYTSDGKYMAMAEPADFVHVYDV 389
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TL GHL I + + + +VSAS D + +W+ + V + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 572 SYVACGGLDNICSIYSL 622
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
++++ G + +WD + V + S GG D +++ K
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK-- 81
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCALWDIETGQQCGQFTGHTGDVM 808
N R L GH Y+ +F + I+++S D T +W+ ++ TGH VM
Sbjct: 82 --NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVM 139
Query: 809 VA 814
A
Sbjct: 140 CA 141
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 571
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 572 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 700
+ +A G D+ ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DSGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D +S S DGK+ +WD V +R C Y P G G + C Y
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALC-YRPDGKGAVVGSMTGECRFY- 473
Query: 620 LKTREGNVRVSRELPGH 670
T + +++ R++ H
Sbjct: 474 -HTTDNQLQLDRDISLH 489
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +2
Query: 596 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQC 775
++ C++ K + E GH+G + + + +L+SS D T LW + + +C
Sbjct: 338 ESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDEC 397
Query: 776 GQFTGH 793
+ H
Sbjct: 398 IRVFSH 403
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 34.7 bits (76), Expect = 0.075
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 10/157 (6%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNK-VHAIP 526
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 205 RIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFE 264
Query: 527 LRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 703
++ V A+ P S +A GG I T G S E S S
Sbjct: 265 EHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVET--GSQVCSLLWSKS 322
Query: 704 DNQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
+ ++L+S G LW + + + GHT V+
Sbjct: 323 ERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVL 359
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 34.7 bits (76), Expect = 0.075
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT------NKVHAIPLRSSWVMTC 553
L GH + Y + W S L+S SQD ++ +WD T N +H S +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 554 AYAPSGSYV-ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 730
A+ + G D I+ L+T + +V + YLS F ++ + T+S
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQV-KVHEREINYLSFNPF-NEWVLATASS 282
Query: 731 DMTCALWDI 757
D T AL+D+
Sbjct: 283 DSTVALFDL 291
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ---ILTSS 727
++P GS +I +YS E ++R E+ H G ++ F N+ + T
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGE-DMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCG 483
Query: 728 GDMTCALWDIETGQQCGQFTGHTGDV 805
D T +WD TG + F GH V
Sbjct: 484 DDKTIKVWDAATGVKRYTFEGHEAPV 509
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 557 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ---ILTSS 727
++P GS +I +YS E ++R E+ H G ++ F N+ + T
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGE-DMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCG 483
Query: 728 GDMTCALWDIETGQQCGQFTGHTGDV 805
D T +WD TG + F GH V
Sbjct: 484 DDKTIKVWDAATGVKRYTFEGHEAPV 509
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.3 bits (75), Expect = 0.099
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 556
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 557 YAPSGSYVACGGLDNICSIYSLKT 628
+ G YVA + IY K+
Sbjct: 370 FTSDGRYVAMAEPADFVHIYDTKS 393
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 294 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 351
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA-LWDIETGQQCGQFTGHTGDV 805
+V V L G+ G + RF D + + + ++D ++G + Q G++
Sbjct: 352 SESVAV---LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEI 407
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.3 bits (75), Expect = 0.099
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 556
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 557 YAPSGSYVACGGLDNICSIYSLKT 628
+ G YVA + IY K+
Sbjct: 364 FTSDGRYVAMAEPADFVHIYDTKS 387
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 631
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 288 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 345
Query: 632 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA-LWDIETGQQCGQFTGHTGDV 805
+V V L G+ G + RF D + + + ++D ++G + Q G++
Sbjct: 346 SESVAV---LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEI 401
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 34.3 bits (75), Expect = 0.099
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 437 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 616
S S +++A+ D + ++D+ ++ S V + +P G VA G C
Sbjct: 246 SGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDGKLVAVLGDSPEC--- 301
Query: 617 SLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIETGQQ 772
L G+ +V L GH Y + + QIL T + D TC LWD+ Q
Sbjct: 302 -LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQ 353
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHT---TNKVHAIPL 529
H + I A W S +L+SAS DGK+++WD T T H+ PL
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAVMTKHTHSFPL 402
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQ 769
L GH+ +S + + + I +SS D + WD+ETG+
Sbjct: 268 LVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGK 304
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCA 556
+T TL GHL +A W D + +QD VWD + + V + + +
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
Query: 557 YAPSGSYVACGGLDNICSIYSL 622
Y G Y+A + +Y +
Sbjct: 370 YTSDGKYMAMAEPADFVHVYDV 391
>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 310
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 218 ELCVTRV-SIMNELDSLRQEAETLKNAIRDARK-AACDTSLAQATSNLEPIGRIQMR 382
ELC+ R+ S+M ELDSLR E ++L+ D K TS + + S PI Q R
Sbjct: 97 ELCLNRLQSLMTELDSLRHENDSLRFENSDLLKLIRISTSSSSSVSPPAPIHNRQFR 153
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 620 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 733
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 620 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 733
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 574
+ GH KI+ + + D + L + +DG + +W ++ + A LR P
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQ-------EPINQ 246
Query: 575 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 754
A ++ K +EL GH+G + + D N +L++S D T LW
Sbjct: 247 QAAL-------VLFPQKAFHIEETPFQELYGHTGDVLDLAWSDSNLLLSASKDKTVRLW- 298
Query: 755 IETG-QQC 775
TG QC
Sbjct: 299 -RTGCDQC 305
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SG 571
L GH + + W SDS L+SAS+D + +W + +H +++V + P +
Sbjct: 268 LYGHTGDVLDLAW-SDSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNK 325
Query: 572 SYVACGGLDNICSIYSL 622
+ A G +D I+ L
Sbjct: 326 NNFASGSIDGKARIWGL 342
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +2
Query: 248 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 427
+ELD L ++ E L + AACD + E R+ + G + ++
Sbjct: 152 SELDELDEKVEALDRHLA----AACDDGCVRIYYISESDKLTYYRSLPRVTG---RALSV 204
Query: 428 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 523
W +D++ + S S DG + WD++ ++V+ I
Sbjct: 205 TWSADAQRIFSGSSDGLIRCWDANLCHEVYRI 236
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 491 DSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGN-VRVSRELPG 667
D + V + + V ++ SG Y+A D C+ K + N V + L
Sbjct: 210 DQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSD--CTAIIWKVLDDNKVELKHTLES 267
Query: 668 HSGYLSCCRFL-DDNQILTSSGDMTCALWDIETG 766
H +S + DD ++LT LWD++TG
Sbjct: 268 HQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTG 301
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSS 538
+I T + L H +++ + + + + L +AS D I+W NKV H + +
Sbjct: 211 QIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQN 270
Query: 539 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 718
V +++P + + G + ++ + T G + SC F D +++
Sbjct: 271 PVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFT-VSSCAWFPDSTRLV 329
Query: 719 TSSGD--MTCALWDIE 760
S D +WD +
Sbjct: 330 CGSSDPERGIVMWDTD 345
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 620 L 622
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 620 L 622
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 359 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 526
P G ++R ++L H AK+ + + S+S D +I+WD + + V +P
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLP 3363
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTS-SGDMTCALWDIETGQQCGQFTGHTGDV 805
L GHSG ++C F Q+L S S D T +WD+ T Q HTG V
Sbjct: 254 LEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV 301
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 529
+L GH ++ + S L S S DG L VWD ++ VH+I L
Sbjct: 126 SLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.23
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 9/156 (5%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNK-VHAIPL 529
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 223 RIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEE 282
Query: 530 RSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
++ V A+ P S +A GG I T G S E S S +
Sbjct: 283 HTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVET--GSQVCSLLWSKSE 340
Query: 707 NQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
++L++ G LW + + + GHT V+
Sbjct: 341 RELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVL 376
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.1 bits (72), Expect = 0.23
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 9/156 (5%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 529
RI+ T GH ++ + W S D + +WD T +H
Sbjct: 239 RIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEE 298
Query: 530 RSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 706
++ V A+ P S +A GG I T G S E S S +
Sbjct: 299 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVET--GSQVCSLLWSQSE 356
Query: 707 NQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
++L+S G LW + + + GHT V+
Sbjct: 357 RELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVL 392
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 583
H + A+ + + + S DG + D H+ N + + V + +P G +
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKIL- 173
Query: 584 CGGLDNICSIYSLKTRE-GNVRVSRELPGHSGYLSCCRFLDDNQILTSS--GDMTCALW 751
+ + LKT +++ ++ GH G + C F +D + + SS G+ A+W
Sbjct: 174 ------VTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 431 WGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY---APSGSYVACGGLDN 601
W D R L ++++D T K+ A LR + Y AP+G Y+A GLD
Sbjct: 203 WSPDGRTLAVPGLRNDVVMYDRFTGEKLFA--LRGDHLEAICYLTWAPNGKYIATSGLDK 260
Query: 602 ICSIYSLKTRE 634
++ + ++
Sbjct: 261 QVLLWDVDKKQ 271
Score = 27.9 bits (59), Expect = 8.6
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHA-IPLRSSWVM 547
R L+GH + + + + L S G ++ W+ S T V +S V
Sbjct: 140 RVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVN 199
Query: 548 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 727
++P G +A GL N +Y T E + + YL+ + I TS
Sbjct: 200 IPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAP--NGKYIATSG 257
Query: 728 GDMTCALWDIETGQ 769
D LWD++ Q
Sbjct: 258 LDKQVLLWDVDKKQ 271
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGDMTC 742
SGS G + C+ Y G ++++ GHS YL + +QILT S D T
Sbjct: 171 SGSVFTAAG--DSCA-YCWDVESGKIKMT--FKGHSDYLHTVVSRSSASQILTGSEDGTA 225
Query: 743 ALWDIETGQ 769
+WD +TG+
Sbjct: 226 RIWDCKTGK 234
Score = 31.5 bits (68), Expect = 0.70
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSS----WVM 547
+ + T +GH ++ + S + +++ S+DG +WD T V I + V
Sbjct: 192 KIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVS 251
Query: 548 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 727
+ A S S++ CG N+ ++++L E + +P H + D+ QILT
Sbjct: 252 SMALDGSESWLVCGQGKNL-ALWNLPASECVQTI--PIPAHVQDV----MFDEKQILTVG 304
Query: 728 GDMTCALWDI 757
+ +D+
Sbjct: 305 AEPLLRRFDL 314
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 713 ILTSSGDMTCALWDIETGQQCGQFTGHT 796
+ T++GD WD+E+G+ F GH+
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 533 SSWVMTCAYAPSGS-YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LD 703
S + ++ A +G+ YVA GG+ I + + + + + L GH ++ R L
Sbjct: 85 SFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSET----IHKSLVGHGDSVNEIRTQPLK 140
Query: 704 DNQILTSSGDMTCALWDIETG 766
++T+S D + LW++ETG
Sbjct: 141 PQLVITASKDESVRLWNVETG 161
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 32.7 bits (71), Expect = 0.30
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +2
Query: 437 SDSRNLVSASQDGKLIVWDSHTTNKVHAI--PLRSSWVMTCAYAPSGSYVACGGLDNICS 610
SD VS S D + +W + + I P V +Y S +A G D
Sbjct: 819 SDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQFSSY--SNHLLAFGSADYKVY 876
Query: 611 IYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTG 790
Y L+ + L GH +S +F+D I+++S D + LW++ G G
Sbjct: 877 CYDLRYVKTPWCT---LAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPG 933
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 554 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL--DDNQILTSS 727
A++P+ + C D+ C I R G V++ H L C + DDN ILT S
Sbjct: 299 AFSPTSAQEFCSVGDDSCLIL-WDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGS 357
Query: 728 GDMTCALWD 754
D T L+D
Sbjct: 358 ADNTVRLFD 366
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 511
GH A + + W D ++ S+++DG L +WD +K
Sbjct: 384 GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSK 421
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 571
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 572 SYVACGGLDNICSIYSL 622
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQIL 718
+ ++ GS + D I+ + ++E V L GHS + CC + D+ I+
Sbjct: 238 IFRIVWSLDGSKIVSVSDDRSARIWEIDSQEV---VGPVLFGHSVRVWDCC--ISDSLIV 292
Query: 719 TSSGDMTCALWDIETGQQCGQFTGHTG 799
T+ D TC +W ++ G Q H G
Sbjct: 293 TAGEDCTCRVWGVD-GTQLEVIKEHIG 318
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 571
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 572 SYVACGGLDNICSIYSL 622
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 542 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQIL 718
+ ++ GS + D I+ + ++E V L GHS + CC + D+ I+
Sbjct: 238 IFRIVWSLDGSKIVSVSDDRSARIWEIDSQEV---VGPVLFGHSVRVWDCC--ISDSLIV 292
Query: 719 TSSGDMTCALWDIETGQQCGQFTGHTG 799
T+ D TC +W ++ G Q H G
Sbjct: 293 TAGEDCTCRVWGVD-GTQLEVIKEHIG 318
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D R +S S D K+ VW V L C Y P G V G C +YS
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCRMYS 623
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 359 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 526
P G ++R + L H AK+ + + S S D +I+WD + + V +P
Sbjct: 3364 PRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLP 3419
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 596 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQC 775
D+ C ++ K + E GH+G + + DN +L++S D T LW + +
Sbjct: 303 DSACVVFPPKVFRIMEKPLYEFRGHTGEVLDISWSKDNYLLSASMDKTVRLWKVGSNDCL 362
Query: 776 GQF 784
G F
Sbjct: 363 GVF 365
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 314 AACDTSLAQA--TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 487
AACD + SNLE ++ R+L + ++ W D++ + S S DG +
Sbjct: 170 AACDDGCVRLYRISNLE-----KLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRC 224
Query: 488 WDSHTTNKVHAI 523
WD+ + ++V+ I
Sbjct: 225 WDATSCHEVYRI 236
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 7/132 (5%)
Frame = +2
Query: 446 RNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 616
R L +A DG + ++ K+ ++P S ++ ++P + G D + +
Sbjct: 166 RILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCW 225
Query: 617 SLKTREGNVRVSRELPGHSGYLSCC--RFLDDNQILTSSGDMTCAL--WDIETGQQCGQF 784
+ R++ L G C L + SGD T + WD E G
Sbjct: 226 DATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAH 285
Query: 785 TGHTGDVMVAVA 820
+ H GDV A
Sbjct: 286 SNHKGDVNTLAA 297
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +2
Query: 452 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 622
LVS G + WDS + A V T A APS + V G D +Y L
Sbjct: 262 LVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKL 318
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +2
Query: 440 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 619
D +S S D K+ +W+ V L+ C Y P G G ++ C +YS
Sbjct: 571 DEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVC-YTPDGQAAFVGSINGHCRLYS 629
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 713 ILTSSGDMTCALWDIETGQQCGQFTGH 793
+L+SS D T LWDIET Q C + H
Sbjct: 533 LLSSSMDKTVRLWDIET-QSCLKLFAH 558
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.1 bits (67), Expect = 0.92
Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW-----DSHTTNKVHAIPLRSSWVMTCAY 559
LRGH +++ ++ W + L + +D + +W + + + + S V +
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 560 APSGSYVACGGLDNICSIYSLKTREGN---VRVSREL-PGHSGYLSCCRF-LDDNQILTS 724
P+ + DN I+ + +G+ V+ EL GHS + F ++++T
Sbjct: 148 HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTC 207
Query: 725 SGDMTCALWDIETGQ-QCGQ 781
S D+ +W + + Q G+
Sbjct: 208 SDDLAVKIWKTDISRMQSGE 227
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.1 bits (67), Expect = 0.92
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 4/130 (3%)
Frame = +2
Query: 389 RTLRGHLAKI-YAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
RTLR H A + + D +LVS DG + WD + + +V +P
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 566 -SGSYVACGGLDNICSIYSLKTREGN--VRVSRELPGHSGYLSCCRFLDDNQILTSSGDM 736
+ S + G D+ ++ + N ++ LP + +L ++ ++G
Sbjct: 189 VNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLP-----VEDVVYLPSGGLIATAGGN 243
Query: 737 TCALWDIETG 766
+ +WD+ G
Sbjct: 244 SVKVWDLIGG 253
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRS 535
L GH I + S L S S DG L++WD ++ V +I L++
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQA 229
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 485 VWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTRE 634
V+D T K+ L T A + G Y+A GG D S+ +KT E
Sbjct: 238 VYDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTME 287
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 568
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 569 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 739
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 740 CALW 751
C ++
Sbjct: 169 CRVF 172
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 568
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 569 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 739
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 740 CALW 751
C ++
Sbjct: 169 CRVF 172
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 568
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 569 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 739
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 740 CALW 751
C ++
Sbjct: 169 CRVF 172
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 461 ASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGN 640
++ GK+ V+D KV + + + P G +A G D I+ L +R
Sbjct: 446 STSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIP-GDLLAVGLDDGSIFIHCLSSR--- 501
Query: 641 VRVSRELPGHSGYLSCCRFLD-DNQILTSSGDMTCALWDIET 763
+V +L GH ++C F N +++S D LW ++
Sbjct: 502 -KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 514
+ + L GH KI + + LVS+ DGKL +W + + K+
Sbjct: 502 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 546
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 511
GH A + + W D ++ S+++DG L +WD K
Sbjct: 373 GHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGK 410
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 742
S +A G D ++ SL V ++L GHS ++ F +NQ + SS D T
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPS---VLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTI 240
Query: 743 ALWDIETG 766
+W++ G
Sbjct: 241 RVWELSRG 248
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 701 DDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
+ +I TSS D TC +WDIE Q H +V
Sbjct: 147 EPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEV 181
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 668 HSGYLSCCRF--LDDNQILTSSGDMTCALWDIETGQ 769
HS Y++C +F +DDN ++ S D +W I Q
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQ 542
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 416 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH-AIPLRSSWVMTCAYAPSGSYVACGG 592
+ ++ + D ++L+S+ DG++ VWD T ++ + S+ + + +G+ A G
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 436
Query: 593 LDNICSIYSLKTREGNVRVS-RELPGHSGYLSCCRFLDDNQIL 718
I +IY G R + + + + +F D QIL
Sbjct: 437 DRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQIL 479
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 502
H + + W + RN L SAS D K+ VWD T
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVAT 297
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 502
H + + W + RN L SAS D K+ VWD T
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVAT 265
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 583
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 77 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 136
Query: 584 CGGLDNICSIYS 619
CG + +YS
Sbjct: 137 CGTQNGTLLLYS 148
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 404 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 583
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 134 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 193
Query: 584 CGGLDNICSIYS 619
CG + +YS
Sbjct: 194 CGTQNGTLLLYS 205
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.1 bits (62), Expect = 3.7
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNKVHAIPLRSSWVMTCA 556
TL GH + + + ++ + ++ D + +WD S +K +R+ T
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKL 216
Query: 557 YAPSGS--YVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 727
G+ ++ C LD + +++ L T + L GH G ++ LD I + S
Sbjct: 217 LVAGGTDGFIHCWKSLDGLRNLFDL-TGFQKEKTEFRLWGHEGPITSLA-LDMTSIFSGS 274
Query: 728 GDMTCALWDIETGQQCGQFTGHT 796
DM+ +WD + +C + H+
Sbjct: 275 WDMSVRIWD-RSSMKCVKTLRHS 296
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2
Query: 395 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 493
L+GH + + + + +S +++AS+DG + VW+
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 401 GHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
GH + + + D LVS SQDG + VW
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Frame = +2
Query: 458 SASQDGKLIVWD----SHTTNKVHAIPLRSSWVMTCAYA----------PSGSYVACGGL 595
SAS DG + VWD S + + + L S V T A P +A GGL
Sbjct: 139 SASSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGL 198
Query: 596 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 697
DN +YS R G EL GH+ ++ F
Sbjct: 199 DNKIKLYS-GERTGKFTSVCELKGHTDWIRSLDF 231
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = +2
Query: 458 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL-KTRE 634
SAS ++ +W+ T V + S V ++ + + D S++S+ +T
Sbjct: 623 SASM-AEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDN 681
Query: 635 GNV--RVSRELPGHSGYLSCCRFLD-DNQILTSSGDMTCALWDIETGQQCGQ 781
G V ++ ++ H + C + +Q TSS D T +W +E + Q
Sbjct: 682 GEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQ 733
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 28.7 bits (61), Expect = 4.9
Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 10/157 (6%)
Frame = +2
Query: 368 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-------TTNKVHAIP 526
RI+ T GH ++ + W + L S + +WD T +H
Sbjct: 236 RIRSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFE 295
Query: 527 LRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 703
++ V A+ P + +A GG I T G S E S S
Sbjct: 296 EHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVET--GSQVCSLLWSQR 353
Query: 704 DNQILTSSG--DMTCALWDIETGQQCGQFTGHTGDVM 808
+ ++L+S G LW + + + GHT V+
Sbjct: 354 ERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVL 390
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 701 DDNQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
+ +I TSS D TC +WDIE Q H +V
Sbjct: 147 EPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEV 181
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
Frame = +2
Query: 389 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 565
R+ + H ++ ++ + R+ +++S D + +W V + V + P
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 566 S-GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDM 736
G A D I+ ++ G+ + +P H + C + DD + TSS D
Sbjct: 160 KHGDVFASASGDCTLRIWDVR-EPGSTMI---IPAHDFEILSCDWNKYDDCILATSSVDK 215
Query: 737 TCALWDIET 763
T +WD+ +
Sbjct: 216 TVKVWDVRS 224
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
RT LRGH + + S+ + L ++ D ++IVW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 566 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 745
S S++A G C ++ L+ G + R H GY++ + + +++SS D T
Sbjct: 423 SPSWIAAGFSSGQCRLFDLR-ENGFISSWR---AHDGYVTKLVAPESHLLVSSSLDKTLR 478
Query: 746 LWDI 757
+WD+
Sbjct: 479 IWDL 482
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 380 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 490
RT LRGH + + S+ + L ++ D +++VW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDD--NQILTSSGDMTCALWDIETGQQCGQFTGHTGDV 805
+ GH +SC + I ++S D LWDI + + QF GH G V
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAV 102
>At4g25250.1 68417.m03633 invertase/pectin methylesterase inhibitor
family protein similar to pectinesterase from
Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum
SP|Q43143; contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 199
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 405 ISRRSTPCTGAAIPGTWCRPVRMVS*SCGTATRPTRC 515
I+ + P T A PGT+ V +C + T PT C
Sbjct: 15 INSSNFPKTAATPPGTYQNHTTYVKTACNSTTYPTMC 51
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 371 IQMRTRRTLRGHLAKIYAM-HWGSDSRNLVSASQDGKLIVW 490
I R RGH ++ M + D L S S DGK+ VW
Sbjct: 209 INTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVW 249
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 659 LPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIETGQQCGQFTGH 793
L GH + + +L+SS D T LWDIET + C + H
Sbjct: 502 LKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIET-KTCLKLFAH 545
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 392 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 517
T+ H I AM W L + S D L WD+ N VH
Sbjct: 109 TVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVH 150
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,372,420
Number of Sequences: 28952
Number of extensions: 323352
Number of successful extensions: 1678
Number of sequences better than 10.0: 178
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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