Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30766
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8) 40 0.002
SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_47613| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 29 3.2
SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 29 3.2
SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_35958| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVRPRTSKGITD
Sbjct: 14 PQHDDVLQDYPRLPAKERLVDTVSVARVRPRTSKGITD 51
>SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVRPRTSKGITD
Sbjct: 112 PQHDDVLQDYPRLPAKERLVDTVSVARVRPRTSKGITD 149
>SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVRPRTSKGITD
Sbjct: 44 PQHDDVLQDYPRLPAKERLVDTVSVARVRPRTSKGITD 81
>SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVRPRTSKGITD
Sbjct: 44 PQHDDVLQDYPRLPAKERLVDTVSVARVRPRTSKGITD 81
>SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVRPRTSKGITD
Sbjct: 44 PQHDDVSQDYPRLPAKERLVDTVSVARVRPRTSKGITD 81
>SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8)
Length = 86
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ + P + D+ SVA VRPRTSKGITD
Sbjct: 44 PQHDDISEDYPRLPAKERLVDTVSVAHVRPRTSKGITD 81
>SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLK 590
MPLDVL RTRATL S P P G GN +K
Sbjct: 1 MPLDVLDRTRATLTVSRVFPSPEGVGNLVK 30
>SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -3
Query: 607 PQHEGVFSGLPGPLGQGEHADSFSVARVRPRTSKGITD 494
PQH+ V P + D+ SVARVR +TSKGITD
Sbjct: 44 PQHDDVSQDYPRLPAKERLVDTVSVARVRAKTSKGITD 81
>SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLK 590
MPLDVLGRTRATL S + G GN +K
Sbjct: 1 MPLDVLGRTRATLTVSTSLSFAGGVGNLVK 30
>SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPR-GPGNPLK 590
MPLDVLGRTRATL S + R G GN +K
Sbjct: 1 MPLDVLGRTRATLTVSTSLSFARKGVGNLVK 31
>SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 501 MPLDVLGRTRATLKES 548
MPLDVLGRTRATL S
Sbjct: 1 MPLDVLGRTRATLTVS 16
>SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 501 MPLDVLGRTRATL 539
MPLDVLGRTRATL
Sbjct: 1 MPLDVLGRTRATL 13
>SB_47613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPR-GPGNPLK 590
MPLDVLGR R TL S + R G GN +K
Sbjct: 1 MPLDVLGRPRVTLTVSTSLSFRRKGVGNLVK 31
>SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 501 MPLDVLGRTRA-TLKESACSPWPRGPGNPLK 590
MPLDVLGRTR T + P P G GN +K
Sbjct: 1 MPLDVLGRTRRYTDGVNESFPRPEGVGNLVK 31
>SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 512 CPGPHARYTEGIS 550
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 512 CPGPHARYTEGIS 550
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 512 CPGPHARYTEGIS 550
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_35958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 146 FLNFKRTASRDSFLNSLLNSAQMTNSCNEDQVFGARYEKQSSTRHLH 6
F+ T R+ F + +Q + +ED+ F + +EK+SS R H
Sbjct: 44 FIAEVNTRRRERFFRFSRSFSQRKDQLHEDKNFFSGFEKRSSVREKH 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,484
Number of Sequences: 59808
Number of extensions: 312583
Number of successful extensions: 854
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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