Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30766
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006619-1|AAK68255.1| 241|Caenorhabditis elegans Hypothetical ... 30 1.2
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 28 4.9
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 28 4.9
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 28 4.9
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 28 4.9
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 28 4.9
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 28 4.9
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 28 4.9
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 28 4.9
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 28 4.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 6.5
>AC006619-1|AAK68255.1| 241|Caenorhabditis elegans Hypothetical
protein C46C11.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 285 LAWFVVLINLAAAGSFLWYSRKRKGDKAATDELAMADEPTIIGR 154
LA + +L A +F S K+KG+ AAT EL + D IGR
Sbjct: 198 LAQGAIATSLIACLAFALGSHKQKGEHAATAELEIEDREYHIGR 241
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 171 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 215
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 171 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 215
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 208 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 252
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 208 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 252
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 134 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 178
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 171 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 215
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 171 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 215
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 208 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 252
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 501 MPLDVLGRTRATLKESACSPWPRGPGNPLKTPS-CWGIGVCNYPP 632
MPLD++G RA+ + SP G +PS G +YPP
Sbjct: 208 MPLDIVGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPP 252
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 631 GG*LQTPIPQHEGVFSGLPGPLGQGEHADSF 539
GG Q + QH+G G GP G G+ +SF
Sbjct: 1695 GGVGQVQMQQHQGSHVGGSGPAGMGQPMNSF 1725
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 631 GG*LQTPIPQHEGVFSGLPGPLGQGEHADSF 539
GG Q + QH+G G GP G G+ +SF
Sbjct: 1684 GGVGQVQMQQHQGSHVGGSGPAGMGQPMNSF 1714
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,456
Number of Sequences: 27780
Number of extensions: 230836
Number of successful extensions: 611
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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