Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30764
(722 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5E02 Cluster: PREDICTED: similar to hydroxypyr... 172 6e-42
UniRef50_UPI000051AAAC Cluster: PREDICTED: similar to hydroxypyr... 171 1e-41
UniRef50_Q7QBM0 Cluster: ENSANGP00000020412; n=3; Endopterygota|... 156 6e-37
UniRef50_A7RNR7 Cluster: Predicted protein; n=2; Nematostella ve... 144 1e-33
UniRef50_Q7T3H9 Cluster: Putative hydroxypyruvate isomerase; n=1... 142 6e-33
UniRef50_Q5T013 Cluster: Putative hydroxypyruvate isomerase; n=3... 138 1e-31
UniRef50_P36951 Cluster: Putative hydroxypyruvate isomerase; n=3... 138 1e-31
UniRef50_A1K4M5 Cluster: Putative hydroxypyruvate isomerase; n=2... 125 1e-27
UniRef50_A4SZ67 Cluster: Hydroxypyruvate isomerase; n=21; Proteo... 120 3e-26
UniRef50_P30147 Cluster: Hydroxypyruvate isomerase; n=22; Proteo... 120 5e-26
UniRef50_Q39FJ3 Cluster: Hydroxypyruvate isomerase; n=81; Bacter... 115 1e-24
UniRef50_A7FKD2 Cluster: AP endonuclease, family 2; n=9; Yersini... 115 1e-24
UniRef50_Q44015 Cluster: Uncharacterized 28.3 kDa protein in gbd... 115 1e-24
UniRef50_Q2RRE2 Cluster: Hydroxypyruvate isomerase; n=4; Proteob... 113 6e-24
UniRef50_Q5LQC9 Cluster: Hydroxypyruvate isomerase, putative; n=... 109 5e-23
UniRef50_Q8NMU3 Cluster: Hydroxypyruvate isomerase; n=3; Coryneb... 109 7e-23
UniRef50_Q11185 Cluster: Putative hydroxypyruvate isomerase; n=2... 108 2e-22
UniRef50_A1HAK4 Cluster: Hydroxypyruvate isomerase; n=3; Proteob... 105 8e-22
UniRef50_Q57151 Cluster: Uncharacterized protein HI1013; n=47; P... 105 1e-21
UniRef50_A6GL56 Cluster: Hydroxypyruvate isomerase; n=1; Limnoba... 104 2e-21
UniRef50_A4EEA1 Cluster: Hydroxypyruvate isomerase; n=4; Rhodoba... 99 5e-20
UniRef50_Q1AS65 Cluster: Hydroxypyruvate isomerase; n=1; Rubroba... 97 3e-19
UniRef50_A0GDK4 Cluster: Xylose isomerase-like TIM barrel; n=1; ... 97 4e-19
UniRef50_Q5KZS3 Cluster: Hydroxypyruvate isomerase; n=2; Geobaci... 97 5e-19
UniRef50_Q1MZZ2 Cluster: Hydroxypyruvate isomerase; n=1; Oceanob... 95 2e-18
UniRef50_A1W6X7 Cluster: Hydroxypyruvate isomerase; n=30; Proteo... 94 4e-18
UniRef50_Q3DWX1 Cluster: Xylose isomerase-like TIM barrel; n=2; ... 93 8e-18
UniRef50_Q0BTI1 Cluster: Hydroxypyruvate isomerase; n=1; Granuli... 88 2e-16
UniRef50_A5VBE7 Cluster: Hydroxypyruvate isomerase; n=1; Sphingo... 87 3e-16
UniRef50_A4XX82 Cluster: Hydroxypyruvate isomerase; n=3; Pseudom... 87 3e-16
UniRef50_A6W9Y5 Cluster: Hydroxypyruvate isomerase; n=1; Kineoco... 86 7e-16
UniRef50_Q18S71 Cluster: Xylose isomerase-like TIM barrel; n=2; ... 86 1e-15
UniRef50_A1SZ37 Cluster: Xylose isomerase domain protein TIM bar... 85 2e-15
UniRef50_Q6F841 Cluster: Hydroxypyruvate isomerase; n=2; Acineto... 84 3e-15
UniRef50_Q3DYC3 Cluster: Xylose isomerase-like TIM barrel; n=2; ... 83 5e-15
UniRef50_Q7WAJ8 Cluster: Putative exported protein; n=2; Bordete... 80 6e-14
UniRef50_Q1GCW9 Cluster: Hydroxypyruvate isomerase; n=7; Rhodoba... 80 6e-14
UniRef50_A6EF74 Cluster: Putative hydroxypyruvate isomerase; n=1... 79 8e-14
UniRef50_UPI0000E11017 Cluster: hydroxypyruvate isomerase; n=1; ... 78 3e-13
UniRef50_Q849Y3 Cluster: Putative uncharacterized protein orf36;... 77 4e-13
UniRef50_Q01V74 Cluster: Xylose isomerase domain protein TIM bar... 77 4e-13
UniRef50_Q9Z596 Cluster: Uncharacterized protein SCO6206; n=5; A... 75 1e-12
UniRef50_A4XER3 Cluster: Xylose isomerase domain protein TIM bar... 74 3e-12
UniRef50_A3ZZZ0 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_A6BZF0 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q7URI8 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_A6LCH9 Cluster: Putative uncharacterized protein; n=2; ... 73 5e-12
UniRef50_Q01P38 Cluster: Xylose isomerase domain protein TIM bar... 71 3e-11
UniRef50_A3HVE6 Cluster: Hydroxypyruvate isomerase; n=6; Bacteri... 71 4e-11
UniRef50_Q0M6R9 Cluster: Xylose isomerase-like TIM barrel precur... 68 2e-10
UniRef50_A4X7X7 Cluster: Xylose isomerase domain protein TIM bar... 66 8e-10
UniRef50_Q98LJ2 Cluster: Mll1001 protein; n=17; Bacteria|Rep: Ml... 66 1e-09
UniRef50_Q7UJ78 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q1MCP8 Cluster: Putative hydroxypyruvate isomerase; n=2... 64 4e-09
UniRef50_A6DKS6 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A3XL60 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q15SD9 Cluster: Twin-arginine translocation pathway sig... 58 2e-07
UniRef50_A0K194 Cluster: Xylose isomerase domain protein TIM bar... 57 4e-07
UniRef50_A3VA27 Cluster: Putative hydroxypyruvate isomerase; n=1... 55 2e-06
UniRef50_A1FV27 Cluster: Twin-arginine translocation pathway sig... 55 2e-06
UniRef50_A5V2Y9 Cluster: Xylose isomerase domain protein TIM bar... 50 4e-05
UniRef50_Q16D71 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_A4WXN1 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q7UZ41 Cluster: Sugar phosphate isomerase/epimerase; n=... 48 2e-04
UniRef50_A6DJL3 Cluster: D-Tagatose 3-epimerase; n=1; Lentisphae... 48 2e-04
UniRef50_A6DIY8 Cluster: Probable D-tagatose 3-epimerase; n=1; L... 48 2e-04
UniRef50_A3I2P3 Cluster: Sugar phosphate isomerase/epimerase; n=... 48 3e-04
UniRef50_A4XES4 Cluster: Xylose isomerase domain protein TIM bar... 47 5e-04
UniRef50_A7FVI6 Cluster: AP endonuclease, family 2; n=4; Clostri... 46 7e-04
UniRef50_Q93JA5 Cluster: Putative uncharacterized protein SCO749... 45 0.002
UniRef50_Q7N8J5 Cluster: Similarities with D-tagatose 3-epimeras... 44 0.004
UniRef50_Q18X69 Cluster: Xylose isomerase-like TIM barrel; n=2; ... 44 0.005
UniRef50_A1RYE1 Cluster: Xylose isomerase domain protein TIM bar... 44 0.005
UniRef50_Q7UDX1 Cluster: Putative uncharacterized protein; n=3; ... 43 0.009
UniRef50_A6W281 Cluster: Xylose isomerase domain protein TIM bar... 43 0.009
UniRef50_A3HUZ6 Cluster: Putative D-tagatose 3-epimerase; n=1; A... 43 0.009
UniRef50_A3HYP0 Cluster: Putative uncharacterized protein; n=2; ... 42 0.015
UniRef50_Q98GF0 Cluster: D-Tagatose 3-epimerase; n=6; Alphaprote... 41 0.027
UniRef50_A5KKM3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.027
UniRef50_A3PQ83 Cluster: Xylose isomerase domain protein TIM bar... 41 0.036
UniRef50_Q58707 Cluster: Uncharacterized protein MJ1311; n=6; Me... 40 0.082
UniRef50_P73599 Cluster: Uncharacterized protein sll1304; n=1; S... 39 0.11
UniRef50_A6ADU7 Cluster: AP endonuclease, family 2; n=1; Vibrio ... 38 0.33
UniRef50_A3RVG2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.44
UniRef50_A4XGK0 Cluster: Xylose isomerase domain protein TIM bar... 37 0.58
UniRef50_A1R5X7 Cluster: Putative sugar phosphate isomerase/epim... 37 0.58
UniRef50_Q8IEN5 Cluster: Putative uncharacterized protein MAL13P... 36 0.77
UniRef50_Q3SQ89 Cluster: Xylose isomerase-like TIM barrel; n=2; ... 36 1.3
UniRef50_A6WDK6 Cluster: Xylose isomerase domain protein TIM bar... 36 1.3
UniRef50_Q1AYM5 Cluster: Xylose isomerase-like TIM barrel; n=1; ... 35 1.8
UniRef50_Q11K93 Cluster: Xylose isomerase-like TIM barrel; n=22;... 35 1.8
UniRef50_A6TM49 Cluster: Abortive infection protein; n=1; Alkali... 35 1.8
UniRef50_Q01U24 Cluster: Xylose isomerase domain protein TIM bar... 34 3.1
UniRef50_A1WMZ4 Cluster: Xylose isomerase domain protein TIM bar... 34 3.1
UniRef50_O50580 Cluster: D-tagatose 3-epimerase; n=2; Proteobact... 34 3.1
UniRef50_Q92YV0 Cluster: Putative uncharacterized protein; n=2; ... 34 4.1
UniRef50_Q8NT86 Cluster: Sugar phosphate isomerases/epimerases; ... 34 4.1
UniRef50_A1R5X8 Cluster: Putative sugar phosphate isomerase/epim... 34 4.1
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 34 4.1
UniRef50_Q7UUK7 Cluster: Probable D-tagatose 3-epimerase; n=2; P... 33 5.4
UniRef50_Q7UKL1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q9S1L8 Cluster: SpcD; n=2; Streptomyces|Rep: SpcD - Str... 33 5.4
UniRef50_A6L8F9 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 33 5.4
UniRef50_A5IKD2 Cluster: Binding-protein-dependent transport sys... 33 5.4
UniRef50_A0KJP4 Cluster: Periplasmic binding protein; n=4; Gamma... 33 5.4
UniRef50_A0K2D4 Cluster: Xylose isomerase domain protein TIM bar... 33 5.4
UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1; ... 33 7.1
UniRef50_Q7UUZ4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q5WGL8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q4JUQ4 Cluster: Putative oxidoreductase; n=1; Corynebac... 33 7.1
UniRef50_Q1M9D3 Cluster: Putative epimerase/isomerase; n=1; Rhiz... 33 7.1
UniRef50_Q9VMB7 Cluster: CG9596-PA, isoform A; n=4; Diptera|Rep:... 33 7.1
UniRef50_UPI00006CA865 Cluster: IBR domain containing protein; n... 33 9.4
UniRef50_A2TQN4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q6FIN0 Cluster: Similar to sp|P39723 Saccharomyces cere... 33 9.4
>UniRef50_UPI00015B5E02 Cluster: PREDICTED: similar to
hydroxypyruvate isomerase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to hydroxypyruvate isomerase -
Nasonia vitripennis
Length = 264
Score = 172 bits (419), Expect = 6e-42
Identities = 76/141 (53%), Positives = 109/141 (77%), Gaps = 1/141 (0%)
Frame = -3
Query: 669 EKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHL 490
EKNL YAVD E I LIEPIN ++P Y+++D+ +A+ ++++I+SPNL+L++DIFHL
Sbjct: 124 EKNLRYAVDRFASEQIVALIEPINSITVPNYYMNDFSKALALVQKINSPNLKLLVDIFHL 183
Query: 489 QQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
QQ G IT++I P+IGH+QIAQVPNRNEPD+ GEI+Y+YVL L K+GY++++GLEY
Sbjct: 184 QQTQGRITNSIESYYPFIGHIQIAQVPNRNEPDSAGEIDYRYVLAVLEKAGYNKYIGLEY 243
Query: 309 KAIGNTKDGLT-WINNYGYSL 250
K T +GL+ W+N +G +L
Sbjct: 244 KPQAATGEGLSKWLNRFGCTL 264
>UniRef50_UPI000051AAAC Cluster: PREDICTED: similar to
hydroxypyruvate isomerase homolog, partial; n=1; Apis
mellifera|Rep: PREDICTED: similar to hydroxypyruvate
isomerase homolog, partial - Apis mellifera
Length = 152
Score = 171 bits (417), Expect = 1e-41
Identities = 75/135 (55%), Positives = 103/135 (76%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
KNLLYAV+ + E I LIEPIN ++P Y+++ + + +D+IK+I+ NL+L LDIFHLQ
Sbjct: 18 KNLLYAVEKFEKEGIIALIEPINNITVPNYYMNSFQKGLDVIKKINKSNLKLQLDIFHLQ 77
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
I G+IT NI +LLPYIGH+QIAQVP+R+EPDT GEI+YKYVL L GY++++GLEY
Sbjct: 78 HICGNITKNIKELLPYIGHIQIAQVPDRHEPDTSGEIDYKYVLSLLETEGYNDYIGLEYH 137
Query: 306 AIGNTKDGLTWINNY 262
+ ++ +GL WI Y
Sbjct: 138 PMSSSINGLNWIQKY 152
>UniRef50_Q7QBM0 Cluster: ENSANGP00000020412; n=3;
Endopterygota|Rep: ENSANGP00000020412 - Anopheles
gambiae str. PEST
Length = 267
Score = 156 bits (378), Expect = 6e-37
Identities = 70/138 (50%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL A +L+ NI G+IEPIN+Y++P Y+LS Y +AV I + SPNL+LM DI+H Q
Sbjct: 128 NLRLAAPILERNNIIGVIEPINKYAVPGYYLSCYDKAVQTITSVGSPNLKLMFDIYHAQH 187
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGY--DEWVGLEY 310
I G+IT++I +L +IGHVQ+AQVP RNEPD+ GE+N+++VL+ L G D WVG EY
Sbjct: 188 IRGNITNSIRELASHIGHVQLAQVPGRNEPDSDGELNFRHVLQVLDSEGQYADGWVGCEY 247
Query: 309 KAIGNTKDGLTWINNYGY 256
+ + +T +GL W+ ++GY
Sbjct: 248 RPLTSTVEGLRWLRDFGY 265
>UniRef50_A7RNR7 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 257
Score = 144 bits (350), Expect = 1e-33
Identities = 64/135 (47%), Positives = 94/135 (69%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+NL YA + LK I LIEP+ ++P FL+ +A+DIIK++D N++L+LD+FH Q
Sbjct: 123 RNLRYAAERLKQVGIMLLIEPVT--TIPNCFLTRTDQAIDIIKKVDHHNIKLLLDLFHAQ 180
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
+ G++T +T +PYIGH+QI+QVP+R+EPD+ GEINY ++ +AK GY W+G EY
Sbjct: 181 RGHGNLTQTLTDYMPYIGHIQISQVPSRHEPDSDGEINYPFIFHTIAKLGYKGWIGCEYT 240
Query: 306 AIGNTKDGLTWINNY 262
G T+DGL W+ Y
Sbjct: 241 PRGKTEDGLRWLAPY 255
>UniRef50_Q7T3H9 Cluster: Putative hydroxypyruvate isomerase; n=14;
Euteleostomi|Rep: Putative hydroxypyruvate isomerase -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 276
Score = 142 bits (345), Expect = 6e-33
Identities = 62/135 (45%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
NL +A VL E + GLIEPIN + + P+YFL +A +I++R+D P++++ +DIFH Q
Sbjct: 132 NLKHAAGVLDKEGLLGLIEPINSRITDPRYFLHSPHQAAEILQRVDHPSIKMQMDIFHWQ 191
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
+ G++THNI + LP GH+QIAQVP+R+EPD+PGE+N+ ++ L + Y ++G EYK
Sbjct: 192 IMDGNLTHNIRRYLPMTGHIQIAQVPDRHEPDSPGELNFSFIFRLLEELDYQGFIGCEYK 251
Query: 306 AIGNTKDGLTWINNY 262
G+T+ GL W+ Y
Sbjct: 252 PQGSTEAGLEWLRKY 266
>UniRef50_Q5T013 Cluster: Putative hydroxypyruvate isomerase; n=30;
Euteleostomi|Rep: Putative hydroxypyruvate isomerase -
Homo sapiens (Human)
Length = 277
Score = 138 bits (334), Expect = 1e-31
Identities = 62/136 (45%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHL 490
+NL +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH
Sbjct: 131 ENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHW 190
Query: 489 QQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
Q + G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY
Sbjct: 191 QIMDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEY 250
Query: 309 KAIGNTKDGLTWINNY 262
+ G+T +GL+W+ +Y
Sbjct: 251 QPRGDTVEGLSWLRSY 266
>UniRef50_P36951 Cluster: Putative hydroxypyruvate isomerase; n=3;
Sophophora|Rep: Putative hydroxypyruvate isomerase -
Drosophila melanogaster (Fruit fly)
Length = 264
Score = 138 bits (334), Expect = 1e-31
Identities = 57/138 (41%), Positives = 93/138 (67%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL A D L+ + G+IEPIN+Y++P Y+++ Y +A I+ + + N++L+ D++HLQ
Sbjct: 127 NLKIAADSLRASKMIGVIEPINKYAVPGYYMNSYSKAAGILADVAADNIQLLADLYHLQH 186
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ G+++ + + IGH QIAQVP+R+EPD GE++Y +V + L + GYD W+G EYK
Sbjct: 187 LHGNVSKTLEEYKALIGHFQIAQVPHRHEPDVSGELDYGFVFKALQEFGYDGWIGCEYKP 246
Query: 303 IGNTKDGLTWINNYGYSL 250
T +GL W++ GY+L
Sbjct: 247 KTTTVEGLGWVSKLGYTL 264
>UniRef50_A1K4M5 Cluster: Putative hydroxypyruvate isomerase; n=2;
Proteobacteria|Rep: Putative hydroxypyruvate isomerase -
Azoarcus sp. (strain BH72)
Length = 262
Score = 125 bits (302), Expect = 1e-27
Identities = 55/131 (41%), Positives = 83/131 (63%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL +A D LK I+ L+EPIN + +P ++LS +A I+ + + NL + DI+H Q+
Sbjct: 125 NLRFAADALKSAGIRLLVEPINTFDIPGFYLSRTAQAAAILDEVGADNLHIQYDIYHAQR 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ GD+ + I + LP I H+QIA P R+EP T GEINY ++ H+ + GYD W+G EY
Sbjct: 185 MEGDLANTIARHLPRIAHMQIADNPGRHEPGT-GEINYGWLFRHIDRLGYDGWIGCEYLP 243
Query: 303 IGNTKDGLTWI 271
T++GL W+
Sbjct: 244 AAGTREGLGWM 254
>UniRef50_A4SZ67 Cluster: Hydroxypyruvate isomerase; n=21;
Proteobacteria|Rep: Hydroxypyruvate isomerase -
Polynucleobacter sp. QLW-P1DMWA-1
Length = 258
Score = 120 bits (290), Expect = 3e-26
Identities = 55/134 (41%), Positives = 78/134 (58%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
++ YA L + L+EPIN MP YFLS +A ++ + PN+++ +D +H Q
Sbjct: 125 SMKYAAQALAKHQLNLLLEPINTRDMPGYFLSTQAQAHELREECGEPNVKVQMDFYHAQI 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ GD+ K I H QIA VP RNEPD GEINY+Y+ + L + GY W+G EY+
Sbjct: 185 MEGDLVETFKKHFKDIAHTQIASVPKRNEPD-DGEINYEYIYKLLDEMGYQGWIGCEYRP 243
Query: 303 IGNTKDGLTWINNY 262
G T+DGL W+ Y
Sbjct: 244 KGKTEDGLGWLKPY 257
>UniRef50_P30147 Cluster: Hydroxypyruvate isomerase; n=22;
Proteobacteria|Rep: Hydroxypyruvate isomerase -
Escherichia coli (strain K12)
Length = 258
Score = 120 bits (288), Expect = 5e-26
Identities = 58/148 (39%), Positives = 94/148 (63%)
Frame = -3
Query: 705 SGKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDS 526
+G S+ + + +NL YA ++L E+I LIEPIN + +P + L+ +A+ +I +
Sbjct: 111 AGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGC 170
Query: 525 PNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLA 346
NL++ DI+H+Q++ G++T+ +T+ IGH+QIA P+R EP T GEINY Y+ + +
Sbjct: 171 CNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGT-GEINYDYLFKVIE 229
Query: 345 KSGYDEWVGLEYKAIGNTKDGLTWINNY 262
S Y+ WVG EYK T+ GL W++ Y
Sbjct: 230 NSDYNGWVGCEYKPQTTTEAGLRWMDPY 257
>UniRef50_Q39FJ3 Cluster: Hydroxypyruvate isomerase; n=81;
Bacteria|Rep: Hydroxypyruvate isomerase - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 269
Score = 115 bits (277), Expect = 1e-24
Identities = 56/133 (42%), Positives = 82/133 (61%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL +A D LK E I+ L+EP N + +P + L+ +D+I+ + S NL L DI+H+Q+
Sbjct: 125 NLRFAADALKREGIRLLVEPCNCFDIPGFALNRSSEGLDVIRAVGSDNLFLQYDIYHMQR 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ G++ I + L IGHVQ+A P RNEP T GEINY ++ L + GY +VG EYK
Sbjct: 185 MEGELAATIERNLASIGHVQLADNPGRNEPGT-GEINYAFLFALLDRLGYAGYVGCEYKP 243
Query: 303 IGNTKDGLTWINN 265
T +GL W+ +
Sbjct: 244 RTTTTEGLGWLQS 256
>UniRef50_A7FKD2 Cluster: AP endonuclease, family 2; n=9;
Yersinia|Rep: AP endonuclease, family 2 - Yersinia
pseudotuberculosis IP 31758
Length = 264
Score = 115 bits (277), Expect = 1e-24
Identities = 53/132 (40%), Positives = 79/132 (59%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+ L YA D L +NI+ LIEP+N +MP YF+S + A II + + N+ L D++H Q
Sbjct: 124 ERLRYAADYLMADNIRVLIEPLNNDNMPGYFISSFPLAEKIIHQCERKNIFLQFDVYHCQ 183
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
+I G++ N+ P I H+QIA VP R+EP+ GE+NY ++ + L Y W+G EY+
Sbjct: 184 KIHGNLWANLQHYWPLISHIQIASVPERHEPN-KGEVNYPWLFQQLVIKNYPGWIGCEYQ 242
Query: 306 AIGNTKDGLTWI 271
T GL W+
Sbjct: 243 PENETFSGLGWL 254
>UniRef50_Q44015 Cluster: Uncharacterized 28.3 kDa protein in gbd
5'region; n=21; Proteobacteria|Rep: Uncharacterized 28.3
kDa protein in gbd 5'region - Ralstonia eutropha
(Alcaligenes eutrophus)
Length = 260
Score = 115 bits (277), Expect = 1e-24
Identities = 53/135 (39%), Positives = 77/135 (57%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+NL +A + + + LIEPIN MP YFL+ I K + + NL++ D +H Q
Sbjct: 124 ENLAFAANAAAAQGVTVLIEPINTRDMPGYFLNRQDDGQAICKEVGAANLKVQFDCYHCQ 183
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
+ GD+ + + + IGH+QIA VP R+EPD GE+NY Y+ E + GYD W+G EY+
Sbjct: 184 IVEGDVAMKLKRDIAGIGHIQIAGVPERHEPDV-GELNYPYLFEVMDTLGYDGWIGCEYR 242
Query: 306 AIGNTKDGLTWINNY 262
T GL W+ Y
Sbjct: 243 PRAGTSAGLGWLKPY 257
>UniRef50_Q2RRE2 Cluster: Hydroxypyruvate isomerase; n=4;
Proteobacteria|Rep: Hydroxypyruvate isomerase -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 264
Score = 113 bits (271), Expect = 6e-24
Identities = 53/138 (38%), Positives = 76/138 (55%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+NL YA D+ ++ LIE +N MP YFLS A+ +I+ + NL ++ D +H Q
Sbjct: 123 ENLAYAADLFAERGVKVLIEAVNTEDMPGYFLSRPDDALQVIEEVGHKNLHVLYDFYHAQ 182
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
+ G +T + + I HVQ+A VP R EPD GEIN+ Y+ L G+ WVG EY
Sbjct: 183 IVQGGLTDFLESNIERIAHVQVAGVPGRREPDANGEINWPYLFNLLDAHGFPGWVGCEYT 242
Query: 306 AIGNTKDGLTWINNYGYS 253
T+ GL W ++G S
Sbjct: 243 PRAGTEAGLRWARDFGIS 260
>UniRef50_Q5LQC9 Cluster: Hydroxypyruvate isomerase, putative; n=16;
Alphaproteobacteria|Rep: Hydroxypyruvate isomerase,
putative - Silicibacter pomeroyi
Length = 251
Score = 109 bits (263), Expect = 5e-23
Identities = 50/118 (42%), Positives = 76/118 (64%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
LIEP+N++ P YFL G+A +IIK + +PNL+LM D +H+ + GDI +T+LLP I
Sbjct: 132 LIEPLNRHDAPGYFLQTTGQAQEIIKSVSAPNLKLMFDCYHVGRTEGDILTRLTELLPLI 191
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGLTWINNY 262
GH+Q A VP+R PD GE+NY + H++K G+ +G E+K T + W+ ++
Sbjct: 192 GHIQFASVPDRGAPD-HGELNYAEIFSHISKLGWTTPLGAEFKP-RETDEITRWLTSF 247
>UniRef50_Q8NMU3 Cluster: Hydroxypyruvate isomerase; n=3;
Corynebacterium|Rep: Hydroxypyruvate isomerase -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 250
Score = 109 bits (262), Expect = 7e-23
Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Frame = -3
Query: 690 SEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRL 511
SE +N+ +A L ++ +IEPIN YS+P YFL +A +I I PN+++
Sbjct: 108 SETTARYVENIRWAAQQLDKLDVVVVIEPINHYSVPGYFLHTLEQAYWLIDSIAHPNVKI 167
Query: 510 MLDIFHLQQIAGDITHNITKL--LPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSG 337
+ D FHLQQI G++T + ++ +GHVQ+A VP+R+EP T GE+N Y+ + L++ G
Sbjct: 168 LFDTFHLQQIHGNLTRRLREVHGAGLLGHVQVASVPDRHEPGT-GEVNAAYIFQLLSELG 226
Query: 336 YDEWVGLEYKAIGNTKDGLTWI 271
YD + EY G T GL W+
Sbjct: 227 YDGVIAGEYHPAGETTAGLGWL 248
>UniRef50_Q11185 Cluster: Putative hydroxypyruvate isomerase; n=2;
Caenorhabditis|Rep: Putative hydroxypyruvate isomerase -
Caenorhabditis elegans
Length = 262
Score = 108 bits (259), Expect = 2e-22
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+N+ +A + K + LIEPIN+Y++P Y L++Y A+D+I+ S NL++ D FH Q
Sbjct: 127 ENVRFAAEKFKEHKLICLIEPINKYTIPGYHLNNYEDAMDVIQMDQSNNLKIQYDTFHAQ 186
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWV-GLEY 310
QI G I + KL YIG++Q+AQVPNR DT GEI+Y ++ + + +S WV G EY
Sbjct: 187 QINGQIGAIMRKLKDYIGYIQVAQVPNRGACDTRGEIDYHFIFDEI-RSINPSWVIGAEY 245
Query: 309 KAIGNTKDGLTWINNYGYS 253
+ K WI N S
Sbjct: 246 L---DAKPSFNWIENMSLS 261
>UniRef50_A1HAK4 Cluster: Hydroxypyruvate isomerase; n=3;
Proteobacteria|Rep: Hydroxypyruvate isomerase -
Ralstonia pickettii 12J
Length = 262
Score = 105 bits (253), Expect = 8e-22
Identities = 47/134 (35%), Positives = 80/134 (59%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
N+ YA G + ++EPIN MP +FL+ +A + K + + N+++ D++H Q
Sbjct: 125 NVAYAAREAAGAGVTIVLEPINTRDMPGFFLTHQAQAHAVCKEVGAANVKVQFDLYHAQI 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ GD++ + + + +GHVQIA VP+R+EPD GE++Y ++ L GY+ WVG EY+
Sbjct: 185 MEGDLSVKLKQYVDGVGHVQIAGVPDRHEPD-EGELHYPHLFALLDALGYNGWVGCEYRP 243
Query: 303 IGNTKDGLTWINNY 262
T +GL W+ +
Sbjct: 244 RAGTSEGLGWLRRW 257
>UniRef50_Q57151 Cluster: Uncharacterized protein HI1013; n=47;
Proteobacteria|Rep: Uncharacterized protein HI1013 -
Haemophilus influenzae
Length = 258
Score = 105 bits (252), Expect = 1e-21
Identities = 55/147 (37%), Positives = 78/147 (53%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G S E KN+ YA D K I+ +E ++ P Y L +++++ +D
Sbjct: 112 GASREEYKQTFIKNVRYASDKYKPYGIKIQLEALSPEVKPNYLLKSQFDTLEVVELVDRD 171
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
N+ + LD FH Q + G++ KL HVQIA VP+R+EPD GEINY+Y+ + L +
Sbjct: 172 NVFVQLDYFHAQNVDGNLARLTDKLNGKFAHVQIASVPDRHEPD-EGEINYQYIFDKLDE 230
Query: 342 SGYDEWVGLEYKAIGNTKDGLTWINNY 262
GY +VG EYK G T GL W Y
Sbjct: 231 IGYTGYVGCEYKPRGETVTGLDWFQKY 257
>UniRef50_A6GL56 Cluster: Hydroxypyruvate isomerase; n=1;
Limnobacter sp. MED105|Rep: Hydroxypyruvate isomerase -
Limnobacter sp. MED105
Length = 269
Score = 104 bits (250), Expect = 2e-21
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Frame = -3
Query: 669 EKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHL 490
E+NLL+ + E I LIEPIN + +P Y LS A +++ R++ PNL + +D++H
Sbjct: 124 EENLLWLAGTMSAEPIDWLIEPINHFDVPGYLLSRQADAHELLIRLNKPNLGVQMDLYHC 183
Query: 489 QQIAGDITHNITKLLP--YIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGL 316
+ G++ ++ LP + H+Q+A VPNR+E PG Y V HL GY+ +G
Sbjct: 184 LRTEGEVLKALSDYLPTGRVKHMQLAGVPNRDE---PGAEVYAPVCAHLKMLGYNGHMGC 240
Query: 315 EYKAIGNTKDGLTWINNYGYS 253
EY+ T+DGL WI + G+S
Sbjct: 241 EYRPKAGTRDGLGWIRSTGFS 261
>UniRef50_A4EEA1 Cluster: Hydroxypyruvate isomerase; n=4;
Rhodobacteraceae|Rep: Hydroxypyruvate isomerase -
Roseobacter sp. CCS2
Length = 278
Score = 99 bits (238), Expect = 5e-20
Identities = 51/114 (44%), Positives = 64/114 (56%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
IEPIN +MP YFL+D+ ++I ID+ NL+L D FH +I GD+ +
Sbjct: 163 IEPINGETMPGYFLNDFNLGREVITAIDAANLQLQFDTFHAAKITGDVLGTWDAMRDITA 222
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGLTWI 271
HVQ+AQV +R EPD GEI+Y L GY WV EYK T DGL WI
Sbjct: 223 HVQVAQVSDRGEPD-QGEIDYPTFFAMLDAQGYRGWVAGEYKPRTTTADGLGWI 275
>UniRef50_Q1AS65 Cluster: Hydroxypyruvate isomerase; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Hydroxypyruvate
isomerase - Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129)
Length = 270
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G E L +++ +A + + +IE +N + Y LS A ++ +
Sbjct: 111 GMGLEEQLALARESVAWAAERAAERGAEVMIEAVNTFENGPYLLSRTEEAAAFVRSVGRE 170
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
N+RL D++H+Q++ G++T N+ + IGHVQ+A P R EP T GEINY+YVL L
Sbjct: 171 NVRLQYDVYHMQRMEGNLTENLRRHRGLIGHVQVADSPGRGEPGT-GEINYRYVLGVLEG 229
Query: 342 SGYDEWVGLEYK-AIGNTKDGLTWI 271
GY +VGLEY+ T + L W+
Sbjct: 230 LGYGGYVGLEYRPTTETTGESLAWL 254
>UniRef50_A0GDK4 Cluster: Xylose isomerase-like TIM barrel; n=1;
Burkholderia phytofirmans PsJN|Rep: Xylose
isomerase-like TIM barrel - Burkholderia phytofirmans
PsJN
Length = 262
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/144 (33%), Positives = 77/144 (53%)
Frame = -3
Query: 705 SGKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDS 526
SG L N+L A D+ + +IQ L+EP+N+ P YF +I+ I
Sbjct: 110 SGFPRKACLETFRSNILRAADLAESRDIQLLLEPLNEARHPYYFYHHVDELAEILHWIRH 169
Query: 525 PNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLA 346
P L + D +H+ A ++ + + IGH+QIA VP+R+EPD+ G+++ VL
Sbjct: 170 PRLEIQFDTYHVGMEANAVSEVLRRNWSMIGHIQIAAVPDRSEPDS-GDVDIGKVLREAE 228
Query: 345 KSGYDEWVGLEYKAIGNTKDGLTW 274
GY W+G EY+ G+ ++GL+W
Sbjct: 229 SLGYAGWIGCEYQPGGSVEEGLSW 252
>UniRef50_Q5KZS3 Cluster: Hydroxypyruvate isomerase; n=2;
Geobacillus|Rep: Hydroxypyruvate isomerase - Geobacillus
kaustophilus
Length = 265
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/117 (36%), Positives = 66/117 (56%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
IEPIN + MP YFL+D A II+ + N++L D++H+ ++ ++T P I
Sbjct: 141 IEPINPFDMPGYFLTDIEEAAAIIRDLGRTNVKLQYDVYHMARLGRNVTAMFADYAPLIA 200
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGLTWINNY 262
HVQ A P R+EP T GE+ Y+ + L + GY+ +GLEY G + + W + Y
Sbjct: 201 HVQFADAPGRHEPGT-GELPYREIFAFLQEHGYNGAIGLEYIPSGKSSESFVWYDEY 256
>UniRef50_Q1MZZ2 Cluster: Hydroxypyruvate isomerase; n=1;
Oceanobacter sp. RED65|Rep: Hydroxypyruvate isomerase -
Oceanobacter sp. RED65
Length = 271
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/135 (31%), Positives = 72/135 (53%)
Frame = -3
Query: 669 EKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHL 490
+KNL+ A L +I + E IN MP + + + + +D++ +D PN+++ D++H+
Sbjct: 122 KKNLVKAASALAKHHILVVFEAINTKDMPGFLIHNTQQMLDVLTELDHPNIKMQFDVYHM 181
Query: 489 QQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
+ G++ I IGH+Q A P R EP G +N+K + + S Y +V EY
Sbjct: 182 HIMDGNVDEQIRNHGHLIGHIQFADYPGRGEP-LSGNLNFKSLFNDIQHSHYKGYVAAEY 240
Query: 309 KAIGNTKDGLTWINN 265
K G T+D L W+ N
Sbjct: 241 KPTGKTEDSLAWMEN 255
>UniRef50_A1W6X7 Cluster: Hydroxypyruvate isomerase; n=30;
Proteobacteria|Rep: Hydroxypyruvate isomerase -
Acidovorax sp. (strain JS42)
Length = 275
Score = 93.9 bits (223), Expect = 4e-18
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
+NL +A + ++ +IEPIN MP YFL A +++ + + N+++ D++H Q
Sbjct: 124 RNLRWAAGQAGRQGVRLMIEPINGRDMPGYFLQRQQDAHAVLQELGASNVQVQFDLYHCQ 183
Query: 486 QIAGDITHNITKLLP--YIGHVQIAQVPNRNEPDTPGEINYKYVL----EHLAKSGYDEW 325
+ GD+ I LP +GH QIA VP R+EPD GE+ Y+L E G+D W
Sbjct: 184 VMEGDVATKIRHYLPTGRVGHFQIAGVPERHEPD-QGELQVDYLLGVIDEVATTCGFDGW 242
Query: 324 VGLEYK-AI---GNTKDGLTWINNYG 259
VG EY+ AI G T GL W +G
Sbjct: 243 VGCEYRPAIAGPGGTSQGLAWARRWG 268
>UniRef50_Q3DWX1 Cluster: Xylose isomerase-like TIM barrel; n=2;
Chloroflexus|Rep: Xylose isomerase-like TIM barrel -
Chloroflexus aurantiacus J-10-fl
Length = 278
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/131 (30%), Positives = 76/131 (58%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G+ + + V +NL +A + I+ ++E +N + Y L++ + + + +P
Sbjct: 112 GEDRASQMSRVRENLAWACEQAAAAGIEVVVESLNAWENSGYLLTNTAETLAFLASVGAP 171
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
NLR D +H+Q + G+IT I + + IGH+Q+A P+R++P T GE+++ Y+ + +
Sbjct: 172 NLRYQYDCYHMQLMEGNITRTIREHVARIGHIQVADAPHRHQPGT-GELHFPYIFRAIVE 230
Query: 342 SGYDEWVGLEY 310
SGY +VGLE+
Sbjct: 231 SGYTGFVGLEF 241
>UniRef50_Q0BTI1 Cluster: Hydroxypyruvate isomerase; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Hydroxypyruvate
isomerase - Granulobacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1)
Length = 259
Score = 88.2 bits (209), Expect = 2e-16
Identities = 46/134 (34%), Positives = 69/134 (51%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL++A + NI IEPI+ ++ Y+L +A II PN+ L LD++HL
Sbjct: 125 NLIWAARLAAESNITITIEPISIQTINNYYLKTADQASRIISLTGMPNIGLQLDLYHLFL 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
++ K LP H+QIA P R+EP T G I++ + + Y W+ EY
Sbjct: 185 TDTMWEQSLRKWLPQTRHIQIADTPGRHEPGT-GNISWTEIFSIIRNENYHGWISCEYNP 243
Query: 303 IGNTKDGLTWINNY 262
+ +T DGL W +NY
Sbjct: 244 LTSTVDGLMWRDNY 257
>UniRef50_A5VBE7 Cluster: Hydroxypyruvate isomerase; n=1;
Sphingomonas wittichii RW1|Rep: Hydroxypyruvate
isomerase - Sphingomonas wittichii RW1
Length = 266
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL +A D + L+EP+N P YFL D +A ++ ID P++ + D +H+ +
Sbjct: 124 NLRWAADRAADAGVALLVEPLNGIDHPDYFLCDVDQAAGLLAEIDRPSVSIQFDSYHVAR 183
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
D T + IGHVQIA P+R EPD G ++++ + +A GY W+ EY+
Sbjct: 184 QGQDATAVFARFRDAIGHVQIAACPDRAEPD-HGAVDHRAFVRAIAGLGYAGWIAGEYRP 242
Query: 303 IGNTKDGLTWI 271
+ GL W+
Sbjct: 243 CAAVEAGLGWL 253
>UniRef50_A4XX82 Cluster: Hydroxypyruvate isomerase; n=3;
Pseudomonadaceae|Rep: Hydroxypyruvate isomerase -
Pseudomonas mendocina ymp
Length = 263
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G S + L + NL + + I+ L+E IN MP + ++ ++++ +D P
Sbjct: 113 GVSREQALACLVANLRRSAEAFAVLGIRVLVEAINPIDMPGFVINTPEHLDELLRAVDHP 172
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
NL D++H+ + D+ + L IGHVQ A VP R P + GE+++ +LE L K
Sbjct: 173 NLAAQYDLYHMARQELDVAAGMRLLAGRIGHVQFADVPGRGAPGS-GELDFAPLLETLRK 231
Query: 342 SGYDEWVGLEYK-AIGNTKDGLTWI 271
+GYD W+G EY+ T+ L W+
Sbjct: 232 TGYDGWLGAEYRPGEAGTQASLGWL 256
>UniRef50_A6W9Y5 Cluster: Hydroxypyruvate isomerase; n=1;
Kineococcus radiotolerans SRS30216|Rep: Hydroxypyruvate
isomerase - Kineococcus radiotolerans SRS30216
Length = 273
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/140 (31%), Positives = 71/140 (50%)
Frame = -3
Query: 681 LGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 502
L + +N+ +A L + L+E +N +P + L A ++ R+ +PN L D
Sbjct: 118 LETLAENVRFAAHALAPAGVTVLLEAVNTRDVPGFALPTIADAAALLSRVQAPNTGLQFD 177
Query: 501 IFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWV 322
++H Q + GD+ + I HVQIA P R+EP T GE+NY ++L L +GY ++
Sbjct: 178 VYHAQVMRGDLLATFERFRTAIQHVQIADNPGRHEPGT-GEVNYSFLLPALRAAGYGGYI 236
Query: 321 GLEYKAIGNTKDGLTWINNY 262
G EY T G W+ +
Sbjct: 237 GAEYVP---TTAGTGWLREF 253
>UniRef50_Q18S71 Cluster: Xylose isomerase-like TIM barrel; n=2;
Desulfitobacterium hafniense|Rep: Xylose isomerase-like
TIM barrel - Desulfitobacterium hafniense (strain DCB-2)
Length = 262
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/146 (30%), Positives = 78/146 (53%)
Frame = -3
Query: 699 KSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPN 520
+S +E + N+ YA + L+ ++ L+EP+N++ P ++L+ + +I D N
Sbjct: 117 QSPAEQRATLIANIRYAAEQLQQIGVKLLLEPLNRFDAPGFYLNTTEDVLKVIAEADHEN 176
Query: 519 LRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKS 340
+ L D +H + D+ + + LP+I H+Q+A P R++P T GEI+Y + LA+
Sbjct: 177 VFLQYDTYHAAREGEDLLQILREKLPHIAHIQVADNPGRHQPGT-GEIDYHAFFKTLAEV 235
Query: 339 GYDEWVGLEYKAIGNTKDGLTWINNY 262
GY V +EY +T L WI +
Sbjct: 236 GYSYAVSMEYVPQPDTVASLEWIKAF 261
>UniRef50_A1SZ37 Cluster: Xylose isomerase domain protein TIM
barrel; n=2; Bacteria|Rep: Xylose isomerase domain
protein TIM barrel - Psychromonas ingrahamii (strain 37)
Length = 256
Score = 84.6 bits (200), Expect = 2e-15
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = -3
Query: 699 KSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQ-YSMPKYFLSDYGRAVDIIKRIDSP 523
+S +E + L A +L+ +I +IEP+N+ YFL +A DI+K++ SP
Sbjct: 108 RSRAEQQQSIINGLKAAAPLLEAADITLVIEPLNERVDHAGYFLVRSDQAFDIVKQVASP 167
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
++++ DI+H Q G++ NI + YIGH A P RNE GEINY V + K
Sbjct: 168 KVKVLFDIYHQQISEGNVIRNIVDNIDYIGHFHAAGNPGRNELQR-GEINYPQVFSAIQK 226
Query: 342 SGYDEWVGLEY-----KAIGNTKDGLTWI 271
+ + VGLEY + + +D TW+
Sbjct: 227 TNFIGHVGLEYWPTNDQPVAALRDVATWL 255
>UniRef50_Q6F841 Cluster: Hydroxypyruvate isomerase; n=2;
Acinetobacter|Rep: Hydroxypyruvate isomerase -
Acinetobacter sp. (strain ADP1)
Length = 265
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/140 (25%), Positives = 74/140 (52%)
Frame = -3
Query: 681 LGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 502
L + NL +A + L I+ + E IN MP++ + + +A ++++ + P L++ D
Sbjct: 120 LNTLASNLKFACERLTEHGIEPVFEMINGTDMPRFLVQNIAQAQEMLEAVRHPALKMQYD 179
Query: 501 IFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWV 322
+H+ + D+ + + + IGH+Q A P R+EPDT +I++ + + + +S Y ++
Sbjct: 180 CYHMAMMGEDVLAGLKENIGQIGHIQFADCPGRHEPDT-AQIHFNEIFQWIQQSTYQGYI 238
Query: 321 GLEYKAIGNTKDGLTWINNY 262
EY+ ++ W N Y
Sbjct: 239 AAEYRPQSSSAQSFAWKNKY 258
>UniRef50_Q3DYC3 Cluster: Xylose isomerase-like TIM barrel; n=2;
Chloroflexus|Rep: Xylose isomerase-like TIM barrel -
Chloroflexus aurantiacus J-10-fl
Length = 256
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
L+EP N P FL I++ + P+++L+ D +H Q G++T I L I
Sbjct: 138 LLEPRNPVDHPGSFLWSSDEGFAIVRELGQPHVKLLFDCYHQQISEGNLTRRILANLDLI 197
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
GH+ +A VP R+EP T GEINY+++ L + GY +VGLEY
Sbjct: 198 GHIHVADVPGRHEPGT-GEINYEHIFGVLREHGYSGYVGLEY 238
>UniRef50_Q7WAJ8 Cluster: Putative exported protein; n=2;
Bordetella|Rep: Putative exported protein - Bordetella
parapertussis
Length = 268
Score = 79.8 bits (188), Expect = 6e-14
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+EP+N+ MP YF +A DII+ +D PN+ L DI+H + D + ++LP +
Sbjct: 139 LEPLNRADMPGYFYYLPEQAADIIRAVDHPNVGLQFDIYHNLREGLDPHAELRRVLPLVR 198
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGL-TWINNY 262
HVQ A R+EPD P L LA+SGY W+G EY G GL W Y
Sbjct: 199 HVQFAGPDGRHEPD-PASPPVAATLRLLAQSGYGGWMGCEYTPRGLASAGLKAWRGAY 255
>UniRef50_Q1GCW9 Cluster: Hydroxypyruvate isomerase; n=7;
Rhodobacterales|Rep: Hydroxypyruvate isomerase -
Silicibacter sp. (strain TM1040)
Length = 255
Score = 79.8 bits (188), Expect = 6e-14
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = -3
Query: 621 QGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLP 442
Q IEP+N P YFL DY A+DI+ + N+ L D +H Q I GD
Sbjct: 133 QFTIEPLNSGDFPGYFLDDYNLAIDILDEVGRDNVTLQFDAYHAQLIHGDALKVWETFGS 192
Query: 441 YIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY-KAIGNTKDGLTWI 271
HVQ A P+R EP G +++ + + + SGY WV EY + T+D L W+
Sbjct: 193 RASHVQFAAAPSRCEPGR-GPVDFDALFQAIDDSGYSGWVSAEYTPSTPRTEDSLRWM 249
>UniRef50_A6EF74 Cluster: Putative hydroxypyruvate isomerase; n=1;
Pedobacter sp. BAL39|Rep: Putative hydroxypyruvate
isomerase - Pedobacter sp. BAL39
Length = 314
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = -3
Query: 618 GLIEPINQYS-MPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLP 442
GLI + S P FL ++ K +DSP+ +++ DI+H+Q+ G++ NI +
Sbjct: 184 GLIMVLETLSDTPDLFLQQTHETYNVCKAVDSPSCKILYDIYHMQKTEGNLIVNIDRCWE 243
Query: 441 YIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDG 283
I ++QI P RNEP T GEINYK + +H+ GY +G+E+ GN++ G
Sbjct: 244 EIAYIQIGDNPGRNEP-TTGEINYKNLFKHIYDKGYKGVMGMEH---GNSRKG 292
>UniRef50_UPI0000E11017 Cluster: hydroxypyruvate isomerase; n=1;
alpha proteobacterium HTCC2255|Rep: hydroxypyruvate
isomerase - alpha proteobacterium HTCC2255
Length = 316
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/131 (31%), Positives = 70/131 (53%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G S+ + + L A L+ EN+ IEP N Y+ +F+ A+ I + I+SP
Sbjct: 159 GLDESQMIKNYTALLKQAAPRLEAENMVATIEPYNPYTHKGHFIYGNEPALSICREINSP 218
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
++L D FH+Q+ G++ ++ + ++Q+A P RN+P T GE+ Y VL+ L
Sbjct: 219 AVKLNWDFFHMQRTNGNLITHLESGFDQVAYIQLADSPYRNQPGT-GEVAYGNVLKRLRA 277
Query: 342 SGYDEWVGLEY 310
GY ++G E+
Sbjct: 278 LGYKGYIGAEF 288
>UniRef50_Q849Y3 Cluster: Putative uncharacterized protein orf36;
n=3; Enterobacteriaceae|Rep: Putative uncharacterized
protein orf36 - Escherichia coli
Length = 253
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/91 (37%), Positives = 56/91 (61%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL YA + + + LIE +N + P Y + + ++KR+D PNL + LD+FH Q+
Sbjct: 125 NLRYAAECFARHDKRILIEALNPQTKPGYLYHSQYQTLAMVKRVDRPNLAVQLDLFHAQK 184
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPD 391
+ G+++H IT+ H+QIA +P+R+EPD
Sbjct: 185 VDGNLSHLITEYAGQYRHIQIASLPDRHEPD 215
>UniRef50_Q01V74 Cluster: Xylose isomerase domain protein TIM barrel
precursor; n=2; Solibacter usitatus Ellin6076|Rep:
Xylose isomerase domain protein TIM barrel precursor -
Solibacter usitatus (strain Ellin6076)
Length = 286
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = -3
Query: 636 KGENIQGLIEPINQYSMPKYFLSDY-GRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHN 460
KG NI +E +N K ++ D+ VD++KR++SPN++++ DI+H Q + GDI N
Sbjct: 158 KGINI--CMEYLNSKVNHKDYMFDHIAWGVDVMKRVNSPNVKILYDIYHAQIMDGDIVRN 215
Query: 459 ITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
I + +IGH P+R E D E+NY+++ + +A + +VG EY
Sbjct: 216 IRDNIKWIGHFHTGGNPDRKEIDETQELNYRFIAQAIADLNFTGYVGHEY 265
>UniRef50_Q9Z596 Cluster: Uncharacterized protein SCO6206; n=5;
Actinomycetales|Rep: Uncharacterized protein SCO6206 -
Streptomyces coelicolor
Length = 279
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSP----NLRLMLDIFHLQQIAGDITHNITKL 448
L+E +N+ P+Y L A+ ++ R++ N + ++D++HL D+ I
Sbjct: 153 LVEALNKPESPRYPLVSAPAAIAVVDRVNEATGLGNAKFLMDLYHLSMNGEDLPQVIDAY 212
Query: 447 LPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
GHVQIA P R P T G + + +L+ LAK+GYD WVGLEYK
Sbjct: 213 AAKTGHVQIADNPGRGAPGT-GSLPLEDLLDRLAKAGYDGWVGLEYK 258
>UniRef50_A4XER3 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Novosphingobium aromaticivorans DSM
12444|Rep: Xylose isomerase domain protein TIM barrel -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 257
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/131 (28%), Positives = 67/131 (51%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G S + + L A + + + L+EP+N +L +D+++ + SP
Sbjct: 109 GMSEEDHFANAVAALKQAAALAEDAGVTLLLEPLNTRLFSAMYLVSTTLGLDLVEAVGSP 168
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
NLRL+ D++H + DI + + + HVQ+A + +RNEP T G +++ +V+ L
Sbjct: 169 NLRLLYDVWHSAVMGEDIADVLAGRIGLVAHVQVADMEDRNEPGT-GTVDWAHVMNTLKS 227
Query: 342 SGYDEWVGLEY 310
GY +G+EY
Sbjct: 228 LGYQGSIGMEY 238
>UniRef50_A3ZZZ0 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 286
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Frame = -3
Query: 636 KGENIQGLIEPIN------QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAG 475
+G NI IEP+N P Y AVD+ + SP L+++ DI+H Q + G
Sbjct: 154 RGVNI--CIEPLNTRVDVHMKGHPGYQCDTIEWAVDVCDAVGSPRLKILFDIYHTQIMEG 211
Query: 474 DITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
D+ I + YIGH A VP RNE D E+NY +++ + +GY +VG E+
Sbjct: 212 DVITRIGQYQDYIGHYHTAGVPGRNELDDQQELNYPAIMKAIVATGYTGYVGQEF 266
>UniRef50_A6BZF0 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 300
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/91 (38%), Positives = 54/91 (59%)
Frame = -3
Query: 552 VDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEIN 373
+DIIK++ S ++L+ DI+H+Q + GD+ I + YIGHV A P R E D EIN
Sbjct: 201 IDIIKQVGSDRMKLLFDIYHVQIMDGDVIRRIREHKDYIGHVHTAGNPGRGELDQKQEIN 260
Query: 372 YKYVLEHLAKSGYDEWVGLEYKAIGNTKDGL 280
Y +++ L + GY +VG E+ + +GL
Sbjct: 261 YPAIMQALQEIGYKGYVGQEFIPTRDPYEGL 291
>UniRef50_Q7URI8 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 250
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/92 (33%), Positives = 55/92 (59%)
Frame = -3
Query: 585 PKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPN 406
P Y+ D R VD+I+ +DSP ++L+ DI+H+Q + GD+ ++ + ++GH A P
Sbjct: 139 PGYWGDDIHRCVDLIRAVDSPAMKLLFDIYHVQIMHGDVIRHLRRYHEFVGHYHTAGNPG 198
Query: 405 RNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
R E D EINY ++ + ++GY ++ E+
Sbjct: 199 RGELDFNQEINYPPIIRAIRETGYTGYLAQEF 230
>UniRef50_A6LCH9 Cluster: Putative uncharacterized protein; n=2;
Parabacteroides|Rep: Putative uncharacterized protein -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 336
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/132 (28%), Positives = 66/132 (50%)
Frame = -3
Query: 705 SGKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDS 526
+G ++ + + EK L + + + + +E +N Y ++ +RI S
Sbjct: 185 NGVTDLQGWENCEKGLKRLIPLAEKHKVVLTMELLNSVGHKDYLCDHTVWGAELCRRIGS 244
Query: 525 PNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLA 346
PN +L+ DI+H+Q + G+I NI K PY HV P R E D E+ Y +++ L
Sbjct: 245 PNFKLLYDIYHMQIMEGNIIENIRKYHPYFSHVHTGGSPGRAEIDETQELYYPAIIKALM 304
Query: 345 KSGYDEWVGLEY 310
++GY +VG E+
Sbjct: 305 ETGYKGFVGQEF 316
>UniRef50_Q01P38 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Solibacter usitatus Ellin6076|Rep: Xylose
isomerase domain protein TIM barrel - Solibacter
usitatus (strain Ellin6076)
Length = 276
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/121 (31%), Positives = 63/121 (52%)
Frame = -3
Query: 642 VLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITH 463
VL+ N + P+ + P Y D +I++++DSP+ +L+ D++H+ + GD+
Sbjct: 149 VLEQLNTRDTSHPMKGH--PGYQGDDIDYCAEIVRQVDSPHAKLLFDVYHVAIMNGDVIR 206
Query: 462 NITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDG 283
I + +IGHV +A VP R E D EI++ V+ L GY +VG E+ G
Sbjct: 207 RINQYGKWIGHVHVAGVPGRAELDGAQEIHFPGVMRALIDVGYQGYVGQEFIPTREPDQG 266
Query: 282 L 280
L
Sbjct: 267 L 267
>UniRef50_A3HVE6 Cluster: Hydroxypyruvate isomerase; n=6;
Bacteria|Rep: Hydroxypyruvate isomerase - Algoriphagus
sp. PR1
Length = 303
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/133 (30%), Positives = 71/133 (53%)
Frame = -3
Query: 678 GDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDI 499
G+V + A ++ + + ++EP++ P FL ++ I K +DSP +++ DI
Sbjct: 161 GNVIEAYKRAAEIFEPHGLVMVMEPLSDN--PDLFLRHADQSYMICKAVDSPACKILYDI 218
Query: 498 FHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 319
+H+Q+ G++ + K I ++QI P R EP T GEINY V +++ G+ G
Sbjct: 219 YHMQRNEGNLIATMEKTWEEIAYIQIGDNPGRKEP-TTGEINYSNVFKYIHDKGFTGICG 277
Query: 318 LEYKAIGNTKDGL 280
+E+ GN K G+
Sbjct: 278 MEH---GNAKPGV 287
>UniRef50_Q0M6R9 Cluster: Xylose isomerase-like TIM barrel
precursor; n=1; Caulobacter sp. K31|Rep: Xylose
isomerase-like TIM barrel precursor - Caulobacter sp.
K31
Length = 326
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Frame = -3
Query: 612 IEPINQYSM--PKYFLSDYGR-AVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLP 442
+E IN + + P L D+ + D++K++ SP ++++ D+FH Q + G++ IT
Sbjct: 202 MELINSHGVGGPPLSLFDHAKWGFDVVKQVGSPRVKVLYDVFHAQMMDGNLIKTITDNFD 261
Query: 441 YIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY 310
IGH VP R+E D EINY+ V + +A GY +V E+
Sbjct: 262 LIGHFHTGGVPGRHEIDDSQEINYRLVAKTIASLGYTGFVTHEW 305
>UniRef50_A4X7X7 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Salinispora tropica CNB-440|Rep: Xylose
isomerase domain protein TIM barrel - Salinispora
tropica CNB-440
Length = 259
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = -3
Query: 555 AVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEI 376
A +I+++ SP LR++ D++H+Q + G++ H I + P IGHV +A VP R E D E+
Sbjct: 151 AAAVIEQVGSPALRMLYDMYHMQIMEGNLIHTIREKFPLIGHVHVAGVPGRAELDDRQEV 210
Query: 375 NYKYVLEHLAKSGYDEWVGLEY 310
N++ + L + Y +V E+
Sbjct: 211 NWRAIAAALREHDYPGYVTHEF 232
>UniRef50_Q98LJ2 Cluster: Mll1001 protein; n=17; Bacteria|Rep:
Mll1001 protein - Rhizobium loti (Mesorhizobium loti)
Length = 285
Score = 65.7 bits (153), Expect = 1e-09
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Frame = -3
Query: 660 LLYAVDVLKGENIQGLIEPINQYSMPKYFLS-DYGRAVD---IIKRIDSPNLRLMLDIFH 493
L VD+ + E + IE +N +P +GRA D ++ I LRL LD++H
Sbjct: 150 LCRVVDLAEQEGVTFTIENLN---LPVDHPGVPFGRAEDTLALVSSIGHARLRLNLDLYH 206
Query: 492 LQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
Q G++ K LP+IG +Q+A VP R EP T GEIN++ V + L Y VG+E
Sbjct: 207 AQIGEGNLIELCRKCLPWIGEIQVADVPGRCEPGT-GEINWRGVAKALKAMDYSGPVGME 265
Query: 312 YKAIGN 295
A G+
Sbjct: 266 AWAAGD 271
>UniRef50_Q7UJ78 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 302
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = -3
Query: 552 VDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEIN 373
V+++KR+ S N +L+ DI+H+Q + GDI I Y GH A P R+E D E+
Sbjct: 203 VELVKRVGSDNFKLLYDIYHMQIMEGDIIRTIQNNHQYFGHYHTAGNPGRHELDDNQELL 262
Query: 372 YKYVLEHLAKSGYDEWVGLEYKAIGNTKDGL 280
Y + + +A +GYD + E+ + + GL
Sbjct: 263 YPPIAKAIADTGYDGYFAHEFLPVRDPIAGL 293
>UniRef50_Q1MCP8 Cluster: Putative hydroxypyruvate isomerase; n=2;
Rhizobium|Rep: Putative hydroxypyruvate isomerase -
Rhizobium leguminosarum bv. viciae (strain 3841)
Length = 256
Score = 63.7 bits (148), Expect = 4e-09
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDS 526
G S E + + L D+LKG ++ +EP+N + YFL +DII +
Sbjct: 107 GLSREEQRRALTETLRAGADILKGSGVRLGVEPLNIRIDHVGYFLDSTREGLDIIDDVAR 166
Query: 525 PNLRLMLDIFHLQQIAGDITHNITK-LLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHL 349
P + ++ DI+H + + T ++ L I HV +A P RN+P + G I+ L +
Sbjct: 167 PEIGIVYDIYH-SAVMDERTEDVLNGRLDRIIHVHVADHPGRNQPGS-GGIDLARRLGWI 224
Query: 348 AKSGYDEWVGLEYK 307
+GYD VGLEY+
Sbjct: 225 FANGYDGAVGLEYR 238
>UniRef50_A6DKS6 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 299
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/90 (34%), Positives = 49/90 (54%)
Frame = -3
Query: 549 DIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINY 370
+II+ +S N +L+ DI+H+Q + GD+ I + IGH+ A P RNE + EINY
Sbjct: 199 EIIRHFNSDNFKLLFDIYHVQVMQGDLITRINNNIDIIGHIHTAGCPGRNELNDQQEINY 258
Query: 369 KYVLEHLAKSGYDEWVGLEYKAIGNTKDGL 280
V++ L + Y +V E+ + GL
Sbjct: 259 PAVIKALKDNMYKGYVTHEFLPTTDPYKGL 288
>UniRef50_A3XL60 Cluster: Putative uncharacterized protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative
uncharacterized protein - Leeuwenhoekiella blandensis
MED217
Length = 301
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = -3
Query: 696 SNSEPLGDVEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPN 520
S E L + + L V + +N+ ++E +N + Y + V + +R+ S +
Sbjct: 152 SEEEGLANCAEGLAPLVKQAEEKNVVLIMELLNSKIDHADYQCDNTPWGVALCERLGSEH 211
Query: 519 LRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKS 340
+L+ DI+H+Q + GD+ I Y H VP RNE E+NY ++ + +
Sbjct: 212 FKLLYDIYHMQIMEGDVIRTIQDYNQYFAHYHTGGVPGRNEITEVQELNYPAIMRAIKDT 271
Query: 339 GYDEWVGLEY 310
GY +V E+
Sbjct: 272 GYTGFVAQEF 281
>UniRef50_Q15SD9 Cluster: Twin-arginine translocation pathway signal
precursor; n=3; Bacteria|Rep: Twin-arginine
translocation pathway signal precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 301
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = -3
Query: 585 PKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPN 406
P Y VD+ K + S N +L+ DI+H+Q GDI I Y GH A VP
Sbjct: 187 PDYMADSSKWGVDLCKALGSENFKLLYDIYHMQVNEGDIIRTIQDNHQYFGHYHTAGVPG 246
Query: 405 RNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDG 283
R+E E+ Y + + G+ ++ E+ TK G
Sbjct: 247 RHEIGDNQELYYPAIARAIKDVGFTGYLAQEFIPAAETKAG 287
>UniRef50_A0K194 Cluster: Xylose isomerase domain protein TIM
barrel; n=4; Actinomycetales|Rep: Xylose isomerase
domain protein TIM barrel - Arthrobacter sp. (strain
FB24)
Length = 266
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRID----SPNLRLMLDIFHLQQIAGDITHNITKL 448
L+EP++ P+Y L A+ +I R+ + N++L+ D +HL D+ I K
Sbjct: 146 LLEPVS--GAPRYPLLKAQDALSVIARVKEESGAENIKLLADFYHLAVNGDDVAAVIEKH 203
Query: 447 LPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYK 307
GH+QIA P R P T GE+ + + GY+ ++GLEYK
Sbjct: 204 AKDFGHIQIADNPGRGAPGT-GELPLGEWIARSRELGYEGYIGLEYK 249
>UniRef50_A3VA27 Cluster: Putative hydroxypyruvate isomerase; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
hydroxypyruvate isomerase - Rhodobacterales bacterium
HTCC2654
Length = 287
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+E ++ ++P + + +A +++RI P +RL+ D HL GD+ +T+ IG
Sbjct: 157 VEVVDPAAIPGQLFTSFAQAARVVRRIGHPAVRLIYDTGHLIATDGDLLTPLTRDADIIG 216
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEY----KAIGNTKDGLTWIN 268
VQIA P R EP I + VL+ LA G+ V LE+ + + + G+ W++
Sbjct: 217 PVQIAGQPGRCEPGADPRI--RPVLDALAARGFAGLVELEHLWADPSAQSERAGIDWLH 273
>UniRef50_A1FV27 Cluster: Twin-arginine translocation pathway signal
precursor; n=5; Bacteria|Rep: Twin-arginine
translocation pathway signal precursor -
Stenotrophomonas maltophilia R551-3
Length = 298
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = -3
Query: 705 SGKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGR-AVDIIKRID 529
+G E L + E L + + + ++E +N + +L D+ V++ +R+
Sbjct: 146 NGMDPKEGLANAEAGLKRILGHAEKRGVVLVMELLNSKVDHRDYLCDHSAWGVELCQRLG 205
Query: 528 SPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHL 349
S N L+ DI+H+Q + GDI I K H A VP RNE E++Y + +
Sbjct: 206 SDNFGLLYDIYHMQIMEGDIIATIGKHHACFKHYHTAGVPGRNEIGDQQELHYPAICRAI 265
Query: 348 AKSGYDEWVGLEY 310
+G+ ++ E+
Sbjct: 266 RDTGFKGYLAQEF 278
>UniRef50_A5V2Y9 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Sphingomonas wittichii RW1|Rep: Xylose
isomerase domain protein TIM barrel - Sphingomonas
wittichii RW1
Length = 272
Score = 50.4 bits (115), Expect = 4e-05
Identities = 35/137 (25%), Positives = 61/137 (44%)
Frame = -3
Query: 705 SGKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDS 526
+G ++ L NL A + + + +EP+++ +P + A I+ RID
Sbjct: 125 AGAPRADQLARATDNLGRAAALARARGFRLALEPVSRIRVPLALVEHMAEAAAIVARIDD 184
Query: 525 PNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLA 346
L L++D H+ DI I + VQIA VP R EP G + + +L L
Sbjct: 185 EALGLIVDSCHMALGGEDIPAAILAQADRLRVVQIADVPGRVEPGA-GGLAFAPILAALD 243
Query: 345 KSGYDEWVGLEYKAIGN 295
+ G+ + E+ +G+
Sbjct: 244 RIGWRGMLEAEFDPLGD 260
>UniRef50_Q16D71 Cluster: Putative uncharacterized protein; n=1;
Roseobacter denitrificans OCh 114|Rep: Putative
uncharacterized protein - Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) (Erythrobactersp. (strain
OCh 114)) (Roseobacter denitrificans)
Length = 253
Score = 50.0 bits (114), Expect = 6e-05
Identities = 34/131 (25%), Positives = 60/131 (45%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
NL +A D + I +EP Q FLSD+ +I+ + +PNL L H
Sbjct: 121 NLRHACDAAP-DGIMLTLEPKAQADA---FLSDFEVTAGVIRDVGAPNLGLQFHSQHAAA 176
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 304
+ GD I H+Q+A N P + G ++++ + ++++ Y W+ +Y
Sbjct: 177 LGGDAVSVFETYADLIRHIQLADT-NGAAPGS-GAMDFEALAAAISRAQYAGWLVADYTV 234
Query: 303 IGNTKDGLTWI 271
G T++ L W+
Sbjct: 235 DGRTEEHLDWM 245
>UniRef50_A4WXN1 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides ATCC 17025|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides ATCC
17025
Length = 282
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/100 (29%), Positives = 51/100 (51%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+E +N+Y ++ + +I I PN++L LD FH+ D+ + LP++
Sbjct: 146 LEVVNRYE--SNLVTTAAEGLRLIAAIGQPNVKLHLDTFHMNIEEEDMLATLKSALPHLA 203
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
+ +I Q N + G I ++ +LE L +GYD VG+E
Sbjct: 204 YFEIDQ--NHRGRLSAGAIRFEPLLEWLKGAGYDGLVGVE 241
>UniRef50_Q7UZ41 Cluster: Sugar phosphate isomerase/epimerase; n=1;
Pirellula sp.|Rep: Sugar phosphate isomerase/epimerase -
Rhodopirellula baltica
Length = 288
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/109 (25%), Positives = 53/109 (48%)
Frame = -3
Query: 627 NIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKL 448
N+ EP+N+Y D G V+ K + + N++L+ D+FH+ D+ I
Sbjct: 165 NVPLFYEPLNRYETNLLRTVDEG--VEFCKTLSTDNIKLLADLFHMNIEEADLAAAIRAG 222
Query: 447 LPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAI 301
Y+GH+ V + + G +N++ +++ L GYD ++ E A+
Sbjct: 223 KGYVGHIHF--VDSNRQAAGMGHMNHEPIIQALKDIGYDGYLCAEAFAL 269
>UniRef50_A6DJL3 Cluster: D-Tagatose 3-epimerase; n=1; Lentisphaera
araneosa HTCC2155|Rep: D-Tagatose 3-epimerase -
Lentisphaera araneosa HTCC2155
Length = 283
Score = 48.0 bits (109), Expect = 2e-04
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = -3
Query: 705 SGKS-NSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRID 529
+GK+ +SE + K L D KG+++ IE +N++ + + + V++++ +
Sbjct: 117 TGKAPSSEEMNWAIKGLRELADYAKGKDVLLTIEYLNRFE--SHLTNTLAQTVELVEAVG 174
Query: 528 SPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHL 349
+ NL + D H ++ I + +I HVQ ++ NR P G++N++ L
Sbjct: 175 ADNLGIHYDTHHAHLEEYSLSEAIQQAGKHIKHVQYSE-SNRGIPGQ-GQVNWQENTSAL 232
Query: 348 AKSGYDEWVGLE 313
+ GY+ WV +E
Sbjct: 233 KEIGYEGWVVIE 244
>UniRef50_A6DIY8 Cluster: Probable D-tagatose 3-epimerase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable D-tagatose
3-epimerase - Lentisphaera araneosa HTCC2155
Length = 279
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = -3
Query: 651 AVDVLKGENIQGLI--EPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 478
A+ + EN G+I EP+ + F + + +IK I+SPN RL LD+ +
Sbjct: 136 AIMANEAENEGGIIAIEPLGH--VETNFFTSAEETIKMIKEINSPNCRLHLDVKAMSYED 193
Query: 477 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
I I Y+ H A PN P T G+I+Y + + L K Y +W+ +E
Sbjct: 194 KAIADIIADSAEYLEHFH-ANDPNLRGPGT-GDIDYAPIYKALNKINYSKWLSIE 246
>UniRef50_A3I2P3 Cluster: Sugar phosphate isomerase/epimerase; n=1;
Algoriphagus sp. PR1|Rep: Sugar phosphate
isomerase/epimerase - Algoriphagus sp. PR1
Length = 271
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/101 (23%), Positives = 51/101 (50%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
+ EP+N+Y ++ V+ ++++D+ +++L+ D+FH+ DI+ +I P+I
Sbjct: 152 IYEPLNRYETN--LMNTMKAGVEFLEKLDTKSVKLLADLFHMNIEEADISESILASGPHI 209
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
GH+ A + +P G V E + Y+ ++ E
Sbjct: 210 GHIHFAD--SNRKPIGLGHTEMSSVSEAIKSINYEGYISAE 248
>UniRef50_A4XES4 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Novosphingobium aromaticivorans DSM
12444|Rep: Xylose isomerase domain protein TIM barrel -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 256
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 LIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPY 439
L+E N ++ P S +V + +DSP ++++ D++H D + +
Sbjct: 137 LLESANTRFDHPGVLCSTTQDSVVVADMVDSPRVKVLYDLYHSVVEGEDPESALKAAMHQ 196
Query: 438 IGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
+ HVQ+A P R EP + G I++ L + GY +GLE
Sbjct: 197 VVHVQVADAPGRGEPGS-GNIDWPGALGLFDRVGYRGTIGLE 237
>UniRef50_A7FVI6 Cluster: AP endonuclease, family 2; n=4;
Clostridium botulinum|Rep: AP endonuclease, family 2 -
Clostridium botulinum (strain ATCC 19397 / Type A)
Length = 285
Score = 46.4 bits (105), Expect = 7e-04
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = -3
Query: 696 SNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNL 517
SNSE +++ + Y + +K N +EP P F+ +A+ +I I++P L
Sbjct: 126 SNSEAYDYLKQGINYLL--VKCPNTTFALEP-----EPGMFIEKTEQAIKLINEINNPRL 178
Query: 516 RLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPN----RNEPDTPGEINYKYVLEHL 349
L LDI H+ + +I + +PY H+ I + N P T G+I++ + + L
Sbjct: 179 MLNLDIGHVYCCEENPILSIRRSIPYARHIHIEDIKNGVHYHQIPGT-GDIDFNTIFKDL 237
Query: 348 AKSGYDEWVGLE 313
K Y ++ +E
Sbjct: 238 IKYNYKYYISVE 249
>UniRef50_Q93JA5 Cluster: Putative uncharacterized protein SCO7491;
n=3; Actinomycetales|Rep: Putative uncharacterized
protein SCO7491 - Streptomyces coelicolor
Length = 266
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/112 (25%), Positives = 55/112 (49%)
Frame = -3
Query: 630 ENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITK 451
E + +EP+N+Y + ++ +A D+I+ + ++R+ +D +H+ D +
Sbjct: 142 EGVTLFLEPLNRYE--DHMVNRLDQAADLIRAVGLDSVRIGIDSYHMNIEETDPAAAVVA 199
Query: 450 LLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGN 295
IGH Q++ NR +P G +++ L L GYD + LE + G+
Sbjct: 200 HADVIGHAQVSD-SNRFQPGA-GHLDWPAWLGALHTVGYDGHLALESRLTGD 249
>UniRef50_Q7N8J5 Cluster: Similarities with D-tagatose
3-epimerase-related protein; n=1; Photorhabdus
luminescens subsp. laumondii|Rep: Similarities with
D-tagatose 3-epimerase-related protein - Photorhabdus
luminescens subsp. laumondii
Length = 127
Score = 44.0 bits (99), Expect = 0.004
Identities = 31/107 (28%), Positives = 51/107 (47%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
L+E IN+Y P +L+ DII +D N ++ D FH+ +I+ +I I
Sbjct: 8 LLEGINRYESP--YLNSIKECTDIIDTLDRENTGVLADFFHMSIEESNISESIKYAGDAI 65
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIGN 295
HV + NR P G I+++ L + GY+ ++ LE G+
Sbjct: 66 KHVHLGD-NNRLLPG-HGTIDWQAGFNALKEVGYNGFLNLECSTCGD 110
>UniRef50_Q18X69 Cluster: Xylose isomerase-like TIM barrel; n=2;
Desulfitobacterium hafniense|Rep: Xylose isomerase-like
TIM barrel - Desulfitobacterium hafniense (strain DCB-2)
Length = 270
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = -3
Query: 525 PNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLA 346
PNLRLMLD+FH+ I + K Y HV +A R P T G +N+ ++ L
Sbjct: 177 PNLRLMLDVFHMNIEDKSIAASFIKAKDYNIHVHLAD-NQRGVPGT-GNLNFPDMIRVLK 234
Query: 345 KSGYDEWVGLE 313
GY+ ++ +E
Sbjct: 235 ALGYNRYLSME 245
>UniRef50_A1RYE1 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Thermofilum pendens Hrk 5|Rep: Xylose
isomerase domain protein TIM barrel - Thermofilum
pendens (strain Hrk 5)
Length = 278
Score = 43.6 bits (98), Expect = 0.005
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Frame = -3
Query: 699 KSNSEPLGDVEKNLLYAVDVLKG-------ENIQGLIEPINQYSMPKYFLSDYGRAVDII 541
+ + GDVE V+ L+G + + +EP+N+Y ++ + ++
Sbjct: 118 RGRGDEWGDVEGARRLLVEELRGLARKAGEQGVSLFLEPLNRYE--SRLVNTVEEGLRVL 175
Query: 540 KRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYV 361
+ + NL L+LD FH+ I +I IGH +A NR P G +++ +
Sbjct: 176 EEVGEDNLLLLLDTFHMNIEERVIEDSIRLASGRIGHFHVAD-SNRLAPGM-GHLDFVRI 233
Query: 360 LEHLAKSGYDEWVGLE 313
L L +GY +V E
Sbjct: 234 LHALRDAGYSGFVSAE 249
>UniRef50_Q7UDX1 Cluster: Putative uncharacterized protein; n=3;
Planctomycetaceae|Rep: Putative uncharacterized protein
- Rhodopirellula baltica
Length = 295
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+E +N++ Y L+ + + + +D P+ +M D FH IT I +
Sbjct: 157 VEALNRFEC--YLLNCHADSARFARDVDHPSCGMMYDTFHSNIEEKSITEAIQAGGDKLF 214
Query: 432 HVQIAQVPNRNEPDTPGE--INYKYVLEHLAKSGYDEWVGLE 313
H+ I++ N+ TPG+ +N+K + + KSGYD ++ +E
Sbjct: 215 HIHISE----NDRSTPGKGGVNWKENFDAIVKSGYDGYLTIE 252
>UniRef50_A6W281 Cluster: Xylose isomerase domain protein TIM
barrel; n=2; Gammaproteobacteria|Rep: Xylose isomerase
domain protein TIM barrel - Marinomonas sp. MWYL1
Length = 617
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -3
Query: 579 YFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPY--IGHVQIAQVPN 406
Y ++DY A D+IKR+D PNL ++LD FH+ G+ + +P I VQ+A P+
Sbjct: 140 YHIADYHEAWDLIKRVDHPNLGIILDTFHMFS-RGNTLDVLRDDIPLNKIALVQVADAPS 198
>UniRef50_A3HUZ6 Cluster: Putative D-tagatose 3-epimerase; n=1;
Algoriphagus sp. PR1|Rep: Putative D-tagatose
3-epimerase - Algoriphagus sp. PR1
Length = 283
Score = 42.7 bits (96), Expect = 0.009
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKL-LPYI 436
+EP+N++ ++ +A++I+K +DSP L++ LD FH +I +I K+ +
Sbjct: 147 LEPLNRFESD--MVNTVDQALEIVKAVDSPFLKIQLDTFHNNIEEKNIAVSIRKVGKELL 204
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYD 331
HVQ +R P T G + + + E L + GY+
Sbjct: 205 CHVQ-GNESDRGTPGT-GNLAWNEIKEALEEIGYE 237
>UniRef50_A3HYP0 Cluster: Putative uncharacterized protein; n=2;
Bacteroidetes|Rep: Putative uncharacterized protein -
Algoriphagus sp. PR1
Length = 283
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/96 (25%), Positives = 48/96 (50%)
Frame = -3
Query: 546 IIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYK 367
++K+++ PN++ M D H + I + P +GH I++ +R P + G +N+
Sbjct: 166 LLKKVNHPNVQAMFDTHHANIEEKKLGEAIKYIAPQLGHFHISE-NDRGTPGS-GHVNFD 223
Query: 366 YVLEHLAKSGYDEWVGLEYKAIGNTKDGLTWINNYG 259
+ LA+ Y W+ +E G T++ + N+ G
Sbjct: 224 ETFKALAEVNYKGWLTIE----GFTRNDPAFANSIG 255
>UniRef50_Q98GF0 Cluster: D-Tagatose 3-epimerase; n=6;
Alphaproteobacteria|Rep: D-Tagatose 3-epimerase -
Rhizobium loti (Mesorhizobium loti)
Length = 283
Score = 41.1 bits (92), Expect = 0.027
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -3
Query: 612 IEPINQYSMPKY-FLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
+E +N++ + ++D +D + R P+++ M D FH D TK +
Sbjct: 146 LEALNRFECYLFNTMADLSEHIDAVGR---PHIKAMYDTFHANIEEADPIGAYTKHRRNV 202
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
H+ I++ +R P G I +K + KSGYD+W+ +E
Sbjct: 203 VHIHISE-NDRGVPGR-GNIPWKETFAAIRKSGYDDWLTIE 241
>UniRef50_A5KKM3 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 290
Score = 41.1 bits (92), Expect = 0.027
Identities = 26/99 (26%), Positives = 49/99 (49%)
Frame = -3
Query: 609 EPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGH 430
E +N+Y Y ++D ++ +R+ S N+ L+LD FH+ +I I +GH
Sbjct: 151 EVLNRYET--YIITDCREGLEYCRRVGSENVNLLLDTFHMNIEEDNIPEAIRLAGRKLGH 208
Query: 429 VQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
+ + + NR P G + ++ + L GY++ V +E
Sbjct: 209 LHVGE-SNRKLPGM-GSLPWRDIGRALRDIGYEKGVVME 245
>UniRef50_A3PQ83 Cluster: Xylose isomerase domain protein TIM
barrel; n=4; Alphaproteobacteria|Rep: Xylose isomerase
domain protein TIM barrel - Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9)
Length = 295
Score = 40.7 bits (91), Expect = 0.036
Identities = 27/100 (27%), Positives = 49/100 (49%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+EP+N++ ++ +A++++ + SP L +MLD FH+ I I +
Sbjct: 155 LEPLNRFETD--IVNTTAQAIEVVDAVGSPGLGVMLDTFHMNMEERSIPDAIRATGARLV 212
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
H Q A +R P T G +++ + L ++GY V LE
Sbjct: 213 HFQ-ANENHRGFPGT-GTMDWTAIARALGQAGYAGPVSLE 250
>UniRef50_Q58707 Cluster: Uncharacterized protein MJ1311; n=6;
Methanococcales|Rep: Uncharacterized protein MJ1311 -
Methanococcus jannaschii
Length = 293
Score = 39.5 bits (88), Expect = 0.082
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = -3
Query: 552 VDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPY-IGHVQIAQVPNRNEPDT---- 388
++I+K IDS NL + DI H AG+ + KL IG + + N D
Sbjct: 176 LEIVKDIDSKNLGITFDIGHANT-AGNPAEFVEKLQNIGIGIIHVHAHDNNGYDDEHLKI 234
Query: 387 -PGEINYKYVLEHLAKSGYDEWVGLEYKAI 301
G IN+ VLE L + GYD + +E K I
Sbjct: 235 GEGNINFIEVLEKLKEIGYDGVISIENKNI 264
>UniRef50_P73599 Cluster: Uncharacterized protein sll1304; n=1;
Synechocystis sp. PCC 6803|Rep: Uncharacterized protein
sll1304 - Synechocystis sp. (strain PCC 6803)
Length = 287
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/100 (23%), Positives = 47/100 (47%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+EP+N++ Y L+ + ++++ +D P L L+LD+FH+ D+ + +
Sbjct: 151 VEPLNRFQ--GYALNTVAQGLELLDAVDCPQLGLLLDLFHMNIEEKDVIKAFLQASNHCF 208
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
H+ A +R P + + + + L Y WV +E
Sbjct: 209 HIH-ACAKDRGTPGS-DSFAWGHWFKALQTMDYQGWVTIE 246
>UniRef50_A6ADU7 Cluster: AP endonuclease, family 2; n=1; Vibrio
cholerae 623-39|Rep: AP endonuclease, family 2 - Vibrio
cholerae 623-39
Length = 275
Score = 37.5 bits (83), Expect = 0.33
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = -3
Query: 576 FLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPN 406
FL++ + ++KRI+ P+++ LDI ++ ++ +TK + +GH+ I++ PN
Sbjct: 160 FLTNSDETISLVKRINHPSIKFQLDIGAIKINNESLSDILTKAVKLVGHIHISE-PN 215
>UniRef50_A3RVG2 Cluster: Putative uncharacterized protein; n=1;
Ralstonia solanacearum UW551|Rep: Putative
uncharacterized protein - Ralstonia solanacearum UW551
Length = 278
Score = 37.1 bits (82), Expect = 0.44
Identities = 28/106 (26%), Positives = 49/106 (46%)
Frame = -3
Query: 615 LIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 436
+ E +N+Y + ++ +A+D++ + PNLR++LD +H+ A D I +
Sbjct: 138 VFEVLNRYE--SHLVNTAAQALDLLDAVGQPNLRVLLDAYHMNIEAADPAAAIRLAGARL 195
Query: 435 GHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIG 298
G +A NR G + + E L +GY V +E A G
Sbjct: 196 GLFHVAD-SNRRGVGL-GHTRFDALFEALTGTGYAGPVIVEATASG 239
>UniRef50_A4XGK0 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Caldicellulosiruptor saccharolyticus DSM
8903|Rep: Xylose isomerase domain protein TIM barrel -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 278
Score = 36.7 bits (81), Expect = 0.58
Identities = 31/118 (26%), Positives = 58/118 (49%)
Frame = -3
Query: 666 KNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ 487
++L+ + K +NI +EP + S D A+ ++++ PN+++M D FH+
Sbjct: 137 ESLIEIAEYAKSKNITVCVEPTSADSNLVETADD---ALLMMEQTGLPNVKVMFDTFHVL 193
Query: 486 QIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
+ I K+ + H+ I+ NR P G +++ VL+ L GYD +V +E
Sbjct: 194 YRNEVPSDYIYKMGKNLKHIHISD-HNRLAPG-QGGMDFLPVLQALKDVGYDGYVTME 249
>UniRef50_A1R5X7 Cluster: Putative sugar phosphate
isomerase/epimerase; n=1; Arthrobacter aurescens
TC1|Rep: Putative sugar phosphate isomerase/epimerase -
Arthrobacter aurescens (strain TC1)
Length = 283
Score = 36.7 bits (81), Expect = 0.58
Identities = 32/114 (28%), Positives = 52/114 (45%)
Frame = -3
Query: 654 YAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAG 475
YA V G NI +EP N+Y +FL+ RAV+++ N + D+FH+
Sbjct: 135 YAASV--GINIT--LEPWNRYET--HFLNRLDRAVELLDATGLKNAGVHGDLFHMNIEED 188
Query: 474 DITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
I + + HV +A NR P G I+++ L+ L +D ++ E
Sbjct: 189 SIHGAFARAGSKVNHVHLAD-SNRAAPGV-GHIDFRPTLQTLKDINFDGYLTFE 240
>UniRef50_Q8IEN5 Cluster: Putative uncharacterized protein
MAL13P1.38; n=2; cellular organisms|Rep: Putative
uncharacterized protein MAL13P1.38 - Plasmodium
falciparum (isolate 3D7)
Length = 796
Score = 36.3 bits (80), Expect = 0.77
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -3
Query: 696 SNSEPLGDVEKNLLYAVDV---LKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDS 526
+N+ + DVEKN+ Y D LK +N + + N Y+ Y+++D DI + D
Sbjct: 514 NNNNNIIDVEKNIYYEKDKNNNLKKKNFKNVKN--NNYNSGVYYVNDKDMLKDIKTKEDV 571
Query: 525 PNLRLMLDIFHL---QQIAGDITHNITKLLPY 439
NL M+DI +L + I I + + K+ Y
Sbjct: 572 NNLIYMIDILNLMDDEHIMTYIYNEMNKIYKY 603
>UniRef50_Q3SQ89 Cluster: Xylose isomerase-like TIM barrel; n=2;
Bradyrhizobiaceae|Rep: Xylose isomerase-like TIM barrel
- Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 296
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -3
Query: 546 IIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPD--TPGEI 376
++ +D P L + D H+ + D+ L PYIGH + V +R E + PG +
Sbjct: 160 LLAEVDHPGLGINFDALHVWEGGDDLVSAHRALAPYIGHYHLKNVRSRGELNVFAPGNV 218
>UniRef50_A6WDK6 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Kineococcus radiotolerans SRS30216|Rep:
Xylose isomerase domain protein TIM barrel - Kineococcus
radiotolerans SRS30216
Length = 316
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = -3
Query: 675 DVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIF 496
D L A + +G + G +EP P + + + ++ R SP+L L D+
Sbjct: 151 DTLHETLDAAGLPRGSTVLG-VEP-----EPDFHCATNAQVAALLTRTGSPDLWLSQDLG 204
Query: 495 HLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPD-TPGEINYKY-VLEHLAKSGYDEWV 322
H + D ++ LP H+Q+ + +R PG+ + + + + +GY W+
Sbjct: 205 HCVVVEDDALGSLEHHLPLTRHLQVEDIADRVHAHLVPGDGDVDFDAVGAVLDAGYGGWI 264
Query: 321 GLE 313
+E
Sbjct: 265 SVE 267
>UniRef50_Q1AYM5 Cluster: Xylose isomerase-like TIM barrel; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Xylose
isomerase-like TIM barrel - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 281
Score = 35.1 bits (77), Expect = 1.8
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Frame = -3
Query: 636 KGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNI 457
KG I +EP +Q + D I+ + P ++ DI HL ++G ++
Sbjct: 141 KGLEIVIELEPFSQA-----LVRDVDELARFIREVGHPAVKANADISHLH-LSGASFEDV 194
Query: 456 TKLLPYIGHVQIAQVPNRNEPDTP---GEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKD 286
KL IGH+ ++ + D P G K L+ + +GY V +E + +
Sbjct: 195 GKLRGIIGHIHLSDCDGKKHGDLPAGRGVTPIKDYLKAIIDTGYSGTVSIELEYSPDPDR 254
Query: 285 GLTWI 271
+ W+
Sbjct: 255 IVEWV 259
>UniRef50_Q11K93 Cluster: Xylose isomerase-like TIM barrel; n=22;
Alphaproteobacteria|Rep: Xylose isomerase-like TIM
barrel - Mesorhizobium sp. (strain BNC1)
Length = 630
Score = 35.1 bits (77), Expect = 1.8
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Frame = -3
Query: 573 LSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLP--YIGHVQIAQVP--- 409
++D+ A +I++R D PN+ ++LD FH ++ I N + +P I VQ+A P
Sbjct: 142 INDHRDAWEIVRRADHPNVGIILDSFH--TLSRKIDVNSIRAIPGDKIFIVQLADAPLID 199
Query: 408 ------NRNEPDTPGE--INYKYVLEHLAKSGYDEWVGLE 313
+R+ + PGE + + +A +GYD ++ LE
Sbjct: 200 MDLLYWSRHFRNMPGEGDLPVTDFMRAVAATGYDGYLSLE 239
>UniRef50_A6TM49 Cluster: Abortive infection protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Abortive
infection protein - Alkaliphilus metalliredigens QYMF
Length = 180
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 572 KKYLGIEYWLIGSISPWIFSPFRTSTAYSKFFSTSP 679
KK+LGI WLI ++SP IF P T +Y FS P
Sbjct: 12 KKFLGIHNWLI-NLSPMIFVPLMTVFSYLILFSFIP 46
>UniRef50_Q01U24 Cluster: Xylose isomerase domain protein TIM
barrel; n=1; Solibacter usitatus Ellin6076|Rep: Xylose
isomerase domain protein TIM barrel - Solibacter
usitatus (strain Ellin6076)
Length = 277
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = -3
Query: 555 AVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEI 376
A I+++I SP + M D+ + + + I HV + ++ R+ G+
Sbjct: 171 AAAIVRQIASPAVETMFDVHNAIDEVEPHAVLVDRYFDQIRHVHVNELDGRH--CGTGDY 228
Query: 375 NYKYVLEHLAKSGYDEWVGLE 313
++K + E L GY W+ LE
Sbjct: 229 DFKPIFETLRGRGYTGWISLE 249
>UniRef50_A1WMZ4 Cluster: Xylose isomerase domain protein TIM
barrel; n=2; Comamonadaceae|Rep: Xylose isomerase domain
protein TIM barrel - Verminephrobacter eiseniae (strain
EF01-2)
Length = 295
Score = 34.3 bits (75), Expect = 3.1
Identities = 25/111 (22%), Positives = 54/111 (48%)
Frame = -3
Query: 645 DVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDIT 466
DV + I +E +N+Y + L+ +A++++ ++++P +++ LD +H+ D
Sbjct: 134 DVAAAKGITLGLEVVNRYESNQ--LNTALQALEMLDKLNAPGVKVHLDTYHMNIEETDFL 191
Query: 465 HNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
+ +G+V I + NR + G I++ LA GY+ + E
Sbjct: 192 QPVLACGARLGYVHIGE-SNRGYLGS-GTIDFPEFFRALASIGYEGVITFE 240
>UniRef50_O50580 Cluster: D-tagatose 3-epimerase; n=2;
Proteobacteria|Rep: D-tagatose 3-epimerase - Pseudomonas
cichorii
Length = 290
Score = 34.3 bits (75), Expect = 3.1
Identities = 23/100 (23%), Positives = 44/100 (44%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+E +N++ ++ +D A+ +DSP ++ LD FH+ I +G
Sbjct: 151 LEVVNRFE--QWLCNDAKEAIAFADAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMG 208
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
H + + NR P G + + + L + GYD + +E
Sbjct: 209 HFHLGEA-NRLPPG-EGRLPWDEIFGALKEIGYDGTIVME 246
>UniRef50_Q92YV0 Cluster: Putative uncharacterized protein; n=2;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 285
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 699 KSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQ-YSMPKYFLSDYGRAVDIIKRIDSP 523
K +E L V + A + ++ +EP+N Y+ + L+ AVD+ RI +P
Sbjct: 122 KGVAESLKIVADRVAEAAPCAQASGVKLALEPLNPVYAGNRSCLTTLRDAVDLCDRIAAP 181
Query: 522 NLRLMLDIFHL 490
N+ + +D++H+
Sbjct: 182 NVGIAVDVYHV 192
>UniRef50_Q8NT86 Cluster: Sugar phosphate isomerases/epimerases;
n=2; Corynebacterium glutamicum|Rep: Sugar phosphate
isomerases/epimerases - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 618
Score = 33.9 bits (74), Expect = 4.1
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Frame = -3
Query: 576 FLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKL-LPYIGHVQIAQVP--- 409
F++D+ A ++++++ L LD FH+ G T + + I VQ+A P
Sbjct: 141 FVNDFEHAHALVEKVNHKALGTCLDTFHILS-RGWETDEVENIPAEKIFFVQLADAPKLS 199
Query: 408 ------NRNEPDTPGEINYKYV--LEHLAKSGYDEWVGLE 313
+R+ PGE ++ V + HLAK+GYD + LE
Sbjct: 200 MDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLE 239
>UniRef50_A1R5X8 Cluster: Putative sugar phosphate
isomerase/epimerase; n=1; Arthrobacter aurescens
TC1|Rep: Putative sugar phosphate isomerase/epimerase -
Arthrobacter aurescens (strain TC1)
Length = 284
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = -3
Query: 663 NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 484
+L D + IEP+N++ ++ + +++ + I N+ LMLD FH+
Sbjct: 133 SLREVADYASARGVTLAIEPLNRFETD--LVNTVEQGLELCELIGRDNVGLMLDTFHMSI 190
Query: 483 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPG 382
+I IT + H Q+++ N+ TPG
Sbjct: 191 EEKNIAAAITSAGDKVFHFQVSE----NDRGTPG 220
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 528 SPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEIN 373
+PN R + H QQ IT+N +K LPY+G N N + +IN
Sbjct: 717 APNQRFPNEPIHHQQEQLPITYNFSKNLPYLGQSYSGHNNNNNNNNNTSKIN 768
>UniRef50_Q7UUK7 Cluster: Probable D-tagatose 3-epimerase; n=2;
Planctomycetaceae|Rep: Probable D-tagatose 3-epimerase -
Rhodopirellula baltica
Length = 272
Score = 33.5 bits (73), Expect = 5.4
Identities = 30/130 (23%), Positives = 57/130 (43%)
Frame = -3
Query: 702 GKSNSEPLGDVEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSP 523
G+S E + + + L V L ++ +EP+ FL+ V + + ID
Sbjct: 123 GQSIEEAMENAAEVLRGVVPALHSHGVRIALEPLGPAEGD--FLNTADEGVRLAEMIDDD 180
Query: 522 NLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAK 343
++ L LD+ + + I I + + H A PN P G++ ++ +++ L+
Sbjct: 181 HIGLHLDVKAMSSESKPIETVIREHADSMIHFH-ANDPNLLGPGM-GDVPFQPIMKALSD 238
Query: 342 SGYDEWVGLE 313
YD WV +E
Sbjct: 239 IDYDGWVSVE 248
>UniRef50_Q7UKL1 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 272
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 612 IEPINQ-YSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHL 490
+EPI+ M F++D ++I+ +DSPNL ++LD +H+
Sbjct: 135 LEPIHAGCGMEWSFVNDLESTLEILDMVDSPNLGIVLDTYHV 176
>UniRef50_Q9S1L8 Cluster: SpcD; n=2; Streptomyces|Rep: SpcD -
Streptoverticillium netropsis (Streptoverticillium
flavopersicus)
Length = 262
Score = 33.5 bits (73), Expect = 5.4
Identities = 32/116 (27%), Positives = 49/116 (42%)
Frame = -3
Query: 660 LLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 481
LL A DV ++ +E +N+ RAV I +++P +R+ D FHL
Sbjct: 123 LLAASDVCAERDMTLALEHLNRTETNLVNSCTEARAV--IDALEAPGVRITADCFHLISE 180
Query: 480 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLE 313
DI + I H + VP R D E ++V L +GYD + +E
Sbjct: 181 GLDIRTEVAVAGGSIAHAHTSAVP-RGSGDFREEAQREFV-SALRAAGYDGGLTVE 234
>UniRef50_A6L8F9 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
Parabacteroides distasonis ATCC 8503|Rep:
Peptidyl-prolyl cis-trans isomerase - Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 711
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = -3
Query: 645 DVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNL 517
D+++GENI LI+ + ++ P+ D ++ +K+IDS N+
Sbjct: 118 DMVQGENISPLIQQMQMFTNPQTGAFDKAALLNFLKQIDSDNI 160
>UniRef50_A5IKD2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Thermotoga
petrophila RKU-1|Rep: Binding-protein-dependent
transport systems inner membrane component - Thermotoga
petrophila RKU-1
Length = 314
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 527 LSIRLIMSTALP*SL---KKYLGIEYWLIGSISPWIFSPFRTSTAYSKFFSTSPNG 685
+SI L+M+ ++ +L KK+ G + L+ +SP FS T + FS++PNG
Sbjct: 94 ISIPLVMAVSMIFALLLKKKWYGKLWLLVAFVSPTFFSSVGVLTTWRWIFSSAPNG 149
>UniRef50_A0KJP4 Cluster: Periplasmic binding protein; n=4;
Gammaproteobacteria|Rep: Periplasmic binding protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 314
Score = 33.5 bits (73), Expect = 5.4
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = -3
Query: 618 GLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDI 499
G + Q ++P+Y L G+ + ++ +D+PNL ++D+
Sbjct: 67 GTVNGRGQSTLPRYLLQQAGKEIAVVGDLDNPNLEKLIDL 106
>UniRef50_A0K2D4 Cluster: Xylose isomerase domain protein TIM
barrel; n=4; Actinomycetales|Rep: Xylose isomerase
domain protein TIM barrel - Arthrobacter sp. (strain
FB24)
Length = 629
Score = 33.5 bits (73), Expect = 5.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Frame = -3
Query: 576 FLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVP---- 409
+++DY A +++ +D PNL LD FH+ D I VQ+A P
Sbjct: 141 YVNDYEHAHRLVETVDHPNLGTCLDSFHILSRDWDTAPIEAFSADKIFFVQVADAPKLSM 200
Query: 408 -----NRNEPDTPGEINYKYV--LEHLAKSGYDEWVGLE 313
+R+ PGE ++ + H+ ++GY V LE
Sbjct: 201 DVLSWSRHYRVFPGEGQFELAKFMGHVVRAGYTGPVSLE 239
>UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07531.1 - Gibberella zeae PH-1
Length = 363
Score = 33.1 bits (72), Expect = 7.1
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -3
Query: 444 PYIGHVQIAQVPNRNEPDTPGE----INYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGLT 277
P + VQ A VP N P TPG+ +N Y +A EW G A + T
Sbjct: 278 PPVQEVQPAVVPQHNIPQTPGDSVPPMNQNYPKPGVASPTTTEWRGSTMTAQSPSSPVST 337
Query: 276 WINNY 262
W Y
Sbjct: 338 WTGQY 342
>UniRef50_Q7UUZ4 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 346
Score = 33.1 bits (72), Expect = 7.1
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 552 VDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPD-TPGEI 376
++I+ R+DSP + + LD + + + D ++ PY +VQ+ V + TP +
Sbjct: 247 LEIMDRVDSPWVGINLDTGNFE--SDDPYGDLEACAPYAVNVQVKPVTKSPSGEKTPAD- 303
Query: 375 NYKYVLEHLAKSGYDEWVGLEYK 307
Y + + L SGY +V LEY+
Sbjct: 304 -YGRIAKILRDSGYQGYVVLEYE 325
>UniRef50_Q5WGL8 Cluster: Putative uncharacterized protein; n=1;
Bacillus clausii KSM-K16|Rep: Putative uncharacterized
protein - Bacillus clausii (strain KSM-K16)
Length = 276
Score = 33.1 bits (72), Expect = 7.1
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = -3
Query: 552 VDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPD 391
+ ++ +D P L + D+ H+ + D+ +L P+I H+ + + + + D
Sbjct: 150 LQLLAEVDHPGLAINFDVLHVWESGADVNGAFKQLQPHIRHLHVKNIRSPEDLD 203
>UniRef50_Q4JUQ4 Cluster: Putative oxidoreductase; n=1;
Corynebacterium jeikeium K411|Rep: Putative
oxidoreductase - Corynebacterium jeikeium (strain K411)
Length = 276
Score = 33.1 bits (72), Expect = 7.1
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = -3
Query: 516 RLMLDIFHLQQIAGDITHNI-----TKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEH 352
RL+LD +HL D T ++L P HVQIA P R P T GE + +
Sbjct: 205 RLLLDAYHLAANGEDWTWLADRGPGSELWPE--HVQIADFPGRGAPGT-GEAPLEERINQ 261
Query: 351 LAKSGYDEWVGLEY 310
L +GY+ V LE+
Sbjct: 262 LRAAGYEGEVVLEH 275
>UniRef50_Q1M9D3 Cluster: Putative epimerase/isomerase; n=1;
Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
epimerase/isomerase - Rhizobium leguminosarum bv. viciae
(strain 3841)
Length = 281
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/94 (20%), Positives = 46/94 (48%)
Frame = -3
Query: 612 IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIG 433
+EP ++ + L+ + + ++++ID PN + LD +H+ I +
Sbjct: 143 VEPCTRFDT--HILNTAAQGIWLLEQIDEPNTFVHLDTYHMNVEESGFDDGIRQAAGRSP 200
Query: 432 HVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYD 331
++ +++ +R P T G ++++ V L +G+D
Sbjct: 201 YIHLSE-SHRGVPGT-GTVDWELVFRTLRDTGFD 232
>UniRef50_Q9VMB7 Cluster: CG9596-PA, isoform A; n=4; Diptera|Rep:
CG9596-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 464
Score = 33.1 bits (72), Expect = 7.1
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 597 QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQ---QIAGDITHNITKLLPYIG 433
+YS KY L + + ++ I P +RLMLDIF+ Q ++ G +++++ Y G
Sbjct: 147 EYSQEKYLLKKEKKYFEFVQ-IRQPTIRLMLDIFYRQDSEKVMGIRVDTLSQIISYSG 203
>UniRef50_UPI00006CA865 Cluster: IBR domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: IBR domain containing
protein - Tetrahymena thermophila SB210
Length = 892
Score = 32.7 bits (71), Expect = 9.4
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -3
Query: 627 NIQGLIEPI---NQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDI--TH 463
NIQ + EP+ N +YF + RAV +I+ ID+P +R I + Q+ D+ TH
Sbjct: 290 NIQSINEPVIKNNSSFNIQYFRNKSKRAVSMIEMIDNPEIRKKWVITKVIQMNFDVQLTH 349
Query: 462 NITKLLPY 439
+ + + Y
Sbjct: 350 TLIQSIDY 357
>UniRef50_A2TQN4 Cluster: Putative uncharacterized protein; n=1;
Dokdonia donghaensis MED134|Rep: Putative
uncharacterized protein - Dokdonia donghaensis MED134
Length = 329
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = -3
Query: 474 DITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA-IG 298
D I +++PY V A+ N +E +++Y+ +++ +A SG++ +VG EY+ +
Sbjct: 250 DTYKGIKEMMPYAKGVS-AKSYNFDENGDETKLDYQRLMQIVADSGFEGYVGTEYEGPLE 308
Query: 297 NTKDGL 280
+ K+G+
Sbjct: 309 DPKEGI 314
>UniRef50_Q6FIN0 Cluster: Similar to sp|P39723 Saccharomyces
cerevisiae YAL047c SPI6 STU2P Interactant; n=1; Candida
glabrata|Rep: Similar to sp|P39723 Saccharomyces
cerevisiae YAL047c SPI6 STU2P Interactant - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 664
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +1
Query: 454 RNIMSNVASDLLKMKNV----QHQSQIWTVNTFNNVHSSSIITQEIFGHRILVDWFD 612
R ++SN+AS ++ N+ +++ +I NT N ++ S+I E+ HR +VD+ +
Sbjct: 349 RQLVSNLASKTEELNNILTVKENRLRILEENTKANDNAKSLIASELASHRNMVDYLE 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,392,256
Number of Sequences: 1657284
Number of extensions: 13916698
Number of successful extensions: 35352
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 33999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35292
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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