Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30764
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.27 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.82 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   1.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.3  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.4  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    22   5.8  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    22   5.8  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    22   5.8  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    22   5.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 364 IFVVYLSGRVRLVTIRNLSYLHMSNVWQ*FRNIMSNVAS 480
           IFVV LSG   +  +  +S++H  +    F+N ++NVA+
Sbjct: 83  IFVVSLSGNSAVFIMLIISFMHKKS----FKNFVNNVAA 117


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +1

Query: 280 QTILRVSDGFIFESNPFIVSA-----LSQVF*NIFVVYLSGRV 393
           Q++  +SD F ++    +VS      L+Q+   +FV+YL GRV
Sbjct: 208 QSVQDLSDIFYYKDTAQLVSLALLMQLTQLVPALFVIYLCGRV 250


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 110 YSYRIPLFNFRFLKY 66
           YSY IPL+ F F+ Y
Sbjct: 2   YSYLIPLYLFLFVHY 16


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 615 LIEPINQYSMPKYFLSDYG 559
           LIE  + Y  PK  LSD+G
Sbjct: 247 LIEDFSGYIKPKCVLSDHG 265


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 369 KYVLEHLAKSGYDEWVGLEYK 307
           K V++HL K+  D W  LE K
Sbjct: 86  KTVIQHLYKNKQDWWKQLEAK 106


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 219 NQYLKRDNKIKDCNHNC 269
           +Q+   DN+  DC  NC
Sbjct: 550 DQFCNGDNRPPDCGQNC 566


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 222 QYLKRDNKIKDCNHNC 269
           Q+   DN+  DC  NC
Sbjct: 551 QFCNGDNRPADCQQNC 566


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 87  KTITLEVEPSDTIENV 102



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 163 KTITLEVEPSDTIENV 178



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 239 KTITLEVEPSDTIENV 254



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 315 KTITLEVEPSDTIENV 330



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 391 KTITLEVEPSDTIENV 406



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 467 KTITLEVEPSDTIENV 482



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 543 KTITLEVEPSDTIENV 558



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 619 KTITLEVEPSDTIENV 634


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 KTVTIIVDPSQTILRV 297
           KT+T+ V+PS TI  V
Sbjct: 59  KTITLEVEPSDTIENV 74


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 628 EYPRTNRTNQPVFYAQIFL 572
           EY RT   N+P  +A++ L
Sbjct: 348 EYTRTTHPNEPGRFAKLLL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,124
Number of Sequences: 336
Number of extensions: 3751
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)