Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30763
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.82 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   3.3  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 273 FPQRTDGKHDYRIWNPQLINYAGYQEPDGSIIGD 374
           FP   +G  DY +W   +   +  Q   G   GD
Sbjct: 506 FPHLFNGLVDYSLWKALIFQISNLQTTFGGTFGD 539


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 120 NATRCIGRIQWKKLQIFDCREVTTASGMFEALCNHIKYATNKGNIRS 260
           N T     +QW  LQI +   +       +     IKY+ NK   RS
Sbjct: 263 NLTDVYFTLQWAFLQILEILALAYLCDKVQLKIGEIKYSVNKLIFRS 309


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/70 (22%), Positives = 31/70 (44%)
 Frame = -3

Query: 440 PWGARRFPSKFHTNLCKFNSCWISYNASIWLLVSCIIDKLRIPYSVVMFTVGALWEDRYC 261
           PW       K++ +L K  +C +     +W++     D L+  Y+ ++ T        Y 
Sbjct: 29  PWYDFPTNQKYYPSLAKCYACLLMVVKILWVIYWLQDDALKSVYASLLCTEKIFLFAIY- 87

Query: 260 *TNISFIRSV 231
            TN+S + +V
Sbjct: 88  -TNLSILTTV 96


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 215 QCFEHTACCGHFSAI 171
           QCF  + CCG F  +
Sbjct: 55  QCFGPSICCGPFGCL 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,476
Number of Sequences: 336
Number of extensions: 4676
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)