Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30763
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 31 0.83
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 30 1.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 28 7.7
AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical ... 28 7.7
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.83
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Frame = -1
Query: 721 ATASTIFSRLSSQRFLHPISVPMYQPLKELAVNSRPPQSSLMLETAGKAYHFQPMSLNQS 542
ATA + S P + Y L + N P SS + +
Sbjct: 10 ATAQPSANGFSFNNGFPPFGI-YYSQLPPVNSNGSTPNSSNRFKVKRHRQRVDAGEPRNT 68
Query: 541 YSGCSNCTSITISLGSS-KNSGSFPSAESTSGKMS 440
Y G S S S SS N+ S PS+ STS K S
Sbjct: 69 YQGASTSVSSNSSSSSSTSNTNSTPSSSSTSSKKS 103
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = -1
Query: 694 LSSQRFLHPISVPMYQPLKELAVNSRPPQSSLMLETAGKAYH-FQPMSLNQSYSGCSNCT 518
L +++ H S + S SS + + YH +P S++ S + ++ T
Sbjct: 54 LQFEQYKHTASASRFNTDSSNTARSHDKASSKYINEDNRQYHPSEPQSISNSTTTTNSMT 113
Query: 517 SITISLGSSKNSGSFPSAESTSGKMSHGVRGAFHPSFI 404
+ S+G+ +N+ F + S+ + +FH S I
Sbjct: 114 DSS-SIGNQENNNQFMNNGFPPLNQSNIYQSSFHSSMI 150
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = -1
Query: 694 LSSQRFLHPISVPMYQPLKELAVNSRPPQSSLMLETAGKAYH-FQPMSLNQSYSGCSNCT 518
L +++ H S + S SS + + YH +P S++ S + ++ T
Sbjct: 54 LQFEQYKHTASASRFNTDSSNTARSHDKASSKYINEDNRQYHPSEPQSISNSTTTTNSMT 113
Query: 517 SITISLGSSKNSGSFPSAESTSGKMSHGVRGAFHPSFI 404
+ S+G+ +N+ F + S+ + +FH S I
Sbjct: 114 DSS-SIGNQENNNQFMNNGFPPLNQSNIYQSSFHSSMI 150
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = -1
Query: 664 SVPMYQPLKELAVNSRPPQSSLMLETAGKAYHFQPMSLNQSYSGCSNCTSITISLGSSKN 485
+VP L + NS P SSL T+G + S + + S + T T S S++
Sbjct: 461 TVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQS 520
Query: 484 SGSFPSAESTSG-KMSHGVRGAFHPSFIQISVNSTRAGS 371
+ S S STSG S G G S Q S + GS
Sbjct: 521 TSSLES--STSGATTSSGSAGTTMTSPSQSSSVGSSQGS 557
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = -1
Query: 664 SVPMYQPLKELAVNSRPPQSSLMLETAGKAYHFQPMSLNQSYSGCSNCTSITISLGSSKN 485
+VP L + NS P SSL T+G + S + + S + T T S S++
Sbjct: 668 TVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQS 727
Query: 484 SGSFPSAESTSG-KMSHGVRGAFHPSFIQISVNSTRAGS 371
+ S S STSG S G G S Q S + GS
Sbjct: 728 TSSLES--STSGATTSSGSAGTTMTSPSQSSSVGSSQGS 764
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = -1
Query: 664 SVPMYQPLKELAVNSRPPQSSLMLETAGKAYHFQPMSLNQSYSGCSNCTSITISLGSSKN 485
+VP L + NS P SSL T+G + S + + S + T T S S++
Sbjct: 668 TVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQS 727
Query: 484 SGSFPSAESTSG-KMSHGVRGAFHPSFIQISVNSTRAGS 371
+ S S STSG S G G S Q S + GS
Sbjct: 728 TSSLES--STSGATTSSGSAGTTMTSPSQSSSVGSSQGS 764
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 470 VSREYERQNVPWGARRFPSKFHTNLC 393
VSR Y R +PW PS+ + NLC
Sbjct: 227 VSRGYPRIFLPWLTWHVPSEMYPNLC 252
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 470 VSREYERQNVPWGARRFPSKFHTNLC 393
VSR Y R +PW PS+ + NLC
Sbjct: 227 VSRGYPRIFLPWLTWHVPSEMYPNLC 252
>AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical
protein Y38F2AR.3 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 9 SEAHKARLDEVKRELKEKGTYQLKTSELVFGAKLAWR-NATRCIGRIQWKKLQIFD 173
++A++ + ++ELK + + SEL+ ++ WR A + + + +K+ IFD
Sbjct: 225 NDAYRLFKRDYEKELKSASEWDSRVSELMEREQITWRQQAVKKLKQQDHEKMAIFD 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,289,395
Number of Sequences: 27780
Number of extensions: 419122
Number of successful extensions: 1203
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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