Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30763
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 397 e-113
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.8
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 8.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.9
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 397 bits (977), Expect = e-113
Identities = 170/238 (71%), Positives = 202/238 (84%)
Frame = +3
Query: 6 NSEAHKARLDEVKRELKEKGTYQLKTSELVFGAKLAWRNATRCIGRIQWKKLQIFDCREV 185
NSEAH+ R + V++E+ GTYQL +ELVFGAKLAWRNATRCIGRIQW KLQ+FDCR V
Sbjct: 84 NSEAHRIRWESVQKEVTVTGTYQLTETELVFGAKLAWRNATRCIGRIQWSKLQVFDCRYV 143
Query: 186 TTASGMFEALCNHIKYATNKGNIRSAITIFPQRTDGKHDYRIWNPQLINYAGYQEPDGSI 365
TT SGMFEALCNHIKY+TNKGNIRSAITIFPQRTDGKHDYR+WN QLI+YAGY+ PDG+I
Sbjct: 144 TTTSGMFEALCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNHQLISYAGYKNPDGTI 203
Query: 366 IGDPARVEFTEICMKLGWKAPRTPWDILPLVLSADGKDPEFFELPKEIVMEVQFEHPEYD 545
IGDPA +EFTE+CMKLGWK+ RT +DILPL+LSA+G DP++F++P E+V+EV HP YD
Sbjct: 204 IGDPANIEFTELCMKLGWKSARTRFDILPLILSANGHDPDYFDIPNELVLEVPLSHPTYD 263
Query: 546 WFKDMGWKWYALPAVSNMRLDCGGLEFTANSFNGWYMGTEIGCRNLCDESRLNIVEAV 719
WF+ + KW+A+PAVS M DCGGLEFTA FNGWYM TEIG R+LCD R N++E +
Sbjct: 264 WFEKLELKWFAVPAVSGMVFDCGGLEFTAAPFNGWYMSTEIGSRDLCDVQRYNLLETI 321
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 430 RGAFHPSFIQISVNSTRAGSPIMLPSGSWYPA*LISCG 317
R + IS+++ R GSP + P +W +CG
Sbjct: 87 RNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAGACG 124
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 86 GIGVRGQVGLA*CDQVHRKNTVEKVTDIRLQR 181
G+G+ G +GL + ++K+ + K + L R
Sbjct: 831 GVGIIGGIGLIIIEVAYKKHQIRKQKKMELAR 862
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 115 GVMRPGASEEYS 150
GVMR ASEEYS
Sbjct: 281 GVMRVDASEEYS 292
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 115 GVMRPGASEEYS 150
GVMR ASEEYS
Sbjct: 281 GVMRVDASEEYS 292
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 173 LQRSDHSKRYVRSIVQSHQIR 235
+ + +HSK Y+ SI+ SH R
Sbjct: 227 MSQDNHSKEYLVSIMFSHYDR 247
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 353 WLLVSCIIDKLRIPYSVVMFTVGALWED 270
W+ +C+ D + + VV F G + +D
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQD 148
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 353 WLLVSCIIDKLRIPYSVVMFTVGALWED 270
W+ +C+ D + + VV F G + +D
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQD 148
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 353 WLLVSCIIDKLRIPYSVVMFTVGALWED 270
W+ +C+ D + + VV F G + +D
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQD 148
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,450
Number of Sequences: 438
Number of extensions: 5469
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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