Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30757
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical ...    78   5e-15
Z70780-13|CAD18872.2|  368|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z70780-12|CAA94820.2|  329|Caenorhabditis elegans Hypothetical p...    29   1.9  
AC103567-10|AAL35727.1|  159|Caenorhabditis elegans Hypothetical...    29   2.5  
Z70752-2|CAA94757.2|  366|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U61953-7|AAO91704.1|  330|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z48241-1|CAA88285.1|  346|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical
           protein H28G03.4 protein.
          Length = 459

 Score = 77.8 bits (183), Expect = 5e-15
 Identities = 40/88 (45%), Positives = 54/88 (61%)
 Frame = -3

Query: 441 AYKRRTGHFLTDNLKENRVVKSKQLLKRYVKGGHRNFLFTDVKMFTIEQHFKKQNDRIYA 262
           AYK+ T  FL++  K  R  ++  LL+R+  G HR  LFTD K+F IEQ F  QNDR+YA
Sbjct: 180 AYKKSTCQFLSEAAKIKRKDRAMNLLRRFRNGAHRKVLFTDEKIFCIEQSFNTQNDRVYA 239

Query: 261 QSSKEASQLVDRVQRVHYPTSVMVWWGI 178
           ++   +     RVQR  YP  +MV+ GI
Sbjct: 240 KTQPNS-----RVQRTGYPKGIMVFAGI 262



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -1

Query: 191 FGGVFSYEGVTEPYFCEKGIKTSAQVYQDTILEKVVKPLNNTMFNNQEWFFQQDSAPGHK 12
           F G+ +  G T   F  +GIK +   Y D +L+  + P     F   +W FQQD AP HK
Sbjct: 259 FAGITA-NGKTPLIFVPQGIKVNGNNYLD-MLKTELMPWVKKHFKKTKWTFQQDGAPAHK 316

Query: 11  ARS 3
            ++
Sbjct: 317 HKN 319


>Z70780-13|CAD18872.2|  368|Caenorhabditis elegans Hypothetical
           protein F46B6.3b protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 576 RKRWSKAVRERIRRNPVRKQKILSREMK 493
           ++RW K   +R  RN +RKQK L  + K
Sbjct: 240 KERWEKQDAKRKERNMIRKQKFLDEKKK 267


>Z70780-12|CAA94820.2|  329|Caenorhabditis elegans Hypothetical
           protein F46B6.3a protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 576 RKRWSKAVRERIRRNPVRKQKILSREMK 493
           ++RW K   +R  RN +RKQK L  + K
Sbjct: 240 KERWEKQDAKRKERNMIRKQKFLDEKKK 267


>AC103567-10|AAL35727.1|  159|Caenorhabditis elegans Hypothetical
           protein Y51F10.1 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -3

Query: 510 LSREMK--IAPRTMSRILKDDLGLAAYKRRTGHFLTDNLKENRVVKSKQLLKRYVKGGHR 337
           + REM   ++  T+ R+L     +   K R   F+T+  ++NR+    Q  K   +   R
Sbjct: 83  IKREMNLPVSVETVRRVLSKSQFIKRRKLRKAPFITEKHRQNRI----QFAKINQRTNWR 138

Query: 336 NFLFTDVKMFTIE 298
             +F+D K F  +
Sbjct: 139 QIIFSDEKKFNCD 151


>Z70752-2|CAA94757.2|  366|Caenorhabditis elegans Hypothetical
           protein F25B3.5 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 170 EGVTEPYFCEKGIKTSAQVYQDTILEK 90
           EG+ E   CEK  +++ ++YQ  +L K
Sbjct: 249 EGIPEELLCEKNTESALRIYQSRVLIK 275


>U61953-7|AAO91704.1|  330|Caenorhabditis elegans Hypothetical
           protein R08C7.13 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 72  VKGLHYLLKNGILIHLSRCFDTFFTKVWLSHSFIAKYPTKPS 197
           ++ L+  L   I IH+S   D  F   W     ++K P +PS
Sbjct: 47  MRSLNVSLDGAIRIHISDGSDNVFPPPWFFKFLVSKVPKQPS 88


>Z48241-1|CAA88285.1|  346|Caenorhabditis elegans Hypothetical
           protein C32A3.2 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -3

Query: 576 RKRWSKAVRERIRRNPVRKQKILSREMKI---APRTMSRILKDDLGLAAYKRRTGHFLTD 406
           RK     VRE++ +  V + +   ++ K+   A   M +I KDDL  +A +  T H    
Sbjct: 216 RKALLNDVREKVEQEEVEETERSEKDQKLFTMALEFMEKIYKDDLISSAVQFPTAHSDQQ 275

Query: 405 NLKENR 388
            L +N+
Sbjct: 276 ILSKNK 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,071
Number of Sequences: 27780
Number of extensions: 265848
Number of successful extensions: 694
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)