Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30756
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 191 8e-50
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 184 1e-47
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 182 5e-47
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 169 3e-43
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 167 2e-42
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 163 3e-41
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 102 5e-23
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 90 3e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 90 4e-19
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 85 1e-17
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 83 4e-17
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 80 4e-16
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 5e-16
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 79 9e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 79 9e-16
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 9e-16
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 71 1e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 2e-11
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 52 7e-08
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.025
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.034
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 28 1.3
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 28 1.7
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 2.2
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 27 2.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 6.7
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 8.9
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 8.9
SPAC29B12.04 |snz1||pyridoxine biosynthesis protein|Schizosaccha... 25 8.9
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 191 bits (466), Expect = 8e-50
Identities = 96/185 (51%), Positives = 124/185 (67%), Gaps = 11/185 (5%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG VE+ALWD
Sbjct: 1 MATELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C++V S S +NV KW E+ HF +S+PI+LVA K
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKA 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAA- 593
DLR+ K + VTT+EG+ + +KI A +ECSA + EVFE A RAA
Sbjct: 121 DLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAM 180
Query: 594 LRKKP 608
L+ KP
Sbjct: 181 LKHKP 185
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 184 bits (448), Expect = 1e-47
Identities = 90/185 (48%), Positives = 124/185 (67%), Gaps = 11/185 (5%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG +E+ALWD
Sbjct: 1 MTTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF +++PI+LV K+
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKV 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 596
DLR+ K + +T +EG+ + +KI A +ECSA ++EVFE A RA++
Sbjct: 121 DLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASM 180
Query: 597 RK-KP 608
K KP
Sbjct: 181 LKFKP 185
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 182 bits (443), Expect = 5e-47
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 10/187 (5%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H VP ++V T+IDLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 465 KA----------VVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKPVH 614
+T ++G++L +++ A VECSAL + + VF+EA+ AAL H
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPH 183
Query: 615 KRTCQYL 635
K+ + L
Sbjct: 184 KKKSKCL 190
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 169 bits (412), Expect = 3e-43
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 6/173 (3%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI ++GDG GKT LL V+T+ FP+ Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 467
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+ V +VLVA K DLR +D+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 468 ------AVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKP 608
++ +EG KKI A +ECSA ++E F EA R AL +P
Sbjct: 135 EQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQP 187
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 167 bits (405), Expect = 2e-42
Identities = 87/189 (46%), Positives = 117/189 (61%), Gaps = 13/189 (6%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 281
K+ VVGDG GKTCLL V++ FPE YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF PIVLV K DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 462 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKK-P 608
A VT Q+ + + + A + VECSA E ++EVF+ AV ++K
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNAPY-VECSAKENTGVNEVFQLAVGLTIKKSFS 194
Query: 609 VHKRTCQYL 635
K++C L
Sbjct: 195 FSKKSCVIL 203
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 163 bits (395), Expect = 3e-41
Identities = 84/175 (48%), Positives = 111/175 (63%), Gaps = 10/175 (5%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R K+ VVGDG GKT LL V+T FP EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+YERLRP+SY + + LV +++ S S ENV KW E+ +VP +LV K DLRS
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD 127
Query: 462 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 596
A+ V +Q+ + + ++I A +ECS+L +D+VFE A RAAL
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 102 bits (245), Expect = 5e-23
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKIDL 452
E+Y +R FL+ Y++ SRSS++ + +Y ++ + P+VLVA K DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDE-ISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALR 599
+ + VV+ EG++L K + + VE SA R+N++E F VR R
Sbjct: 126 EA--ERVVSRAEGEQLAKSMHCLY-VETSAKLRLNVEEAFYSLVRTIRR 171
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 90.2 bits (214), Expect = 3e-19
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Frame = +3
Query: 87 MGTTKR--LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMA 257
M KR LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V +
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA----SVPI 425
LWDTAGQE ++ L Y +C ++ Y+V + S+++ V W E + ++ + P
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQEFLYQTSQDECAFPF 119
Query: 426 VLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV--ECSALERINMDEVFEEAVRAALR 599
++V +ID +S +AV + K K ++++ E SA E N+ ++FE R AL
Sbjct: 120 IIVGNQIDKDASKRAVSLHRALDYCKSK-HGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 600 KK 605
+
Sbjct: 179 NE 180
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 89.8 bits (213), Expect = 4e-19
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 458
+ + Y L+ Y V + S++N V W+ + +H S +V +L+ K D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVEQHASENVYKILIGNKCD--C 126
Query: 459 SDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKK 605
D+ V+ ++G+ L ++ +E SA +N+DE F R ++K
Sbjct: 127 EDQRQVSFEQGQALADEL-GVKFLEASAKTNVNVDEAFFTLAREIKKQK 174
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 85.0 bits (201), Expect = 1e-17
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 284
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 461
Y + Y L+ Y + +SS++N V +W EL+ H +++ I+LV K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELREHADSNIVIMLVGNKTDL--L 128
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALR 599
V+T+E + + + +E SA++ N++E F+ + R
Sbjct: 129 HLRAVSTEEAQAFAAENNLS-FIETSAMDASNVEEAFQTVLTEIFR 173
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 83.0 bits (196), Expect = 4e-17
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K +I V+G VGK+ L Y N F E Y PT+ + + +I G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATK 443
TAGQ++Y L + +++ YS+ S+SS+E V L H VPIV+V K
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 444 IDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
DL + VT +EGK L + + A E SA N+ FE
Sbjct: 121 SDLHM--QRAVTAEEGKALANEWKCA-WTEASARHNENVARAFE 161
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 79.8 bits (188), Expect = 4e-16
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQE 281
LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE-LKHFSAS----VPIVLVATKI 446
++ L Y +C ++ Y V + S+E + W E L S S P +L+ K+
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 447 DLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 596
D+ K +V+ + + E SA E IN+ E FE + AL
Sbjct: 128 DV-EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLAL 176
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 79.4 bits (187), Expect = 5e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
LR Y Q C ++ + V SR +Y+NV H W+ +L ++PIVL K+D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKERK 129
Query: 465 -KAVVTTQEGKK 497
KA T KK
Sbjct: 130 VKAKAITFHRKK 141
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 78.6 bits (185), Expect = 9e-16
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAG 275
++ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDL 452
QE + L P ++ ++ Y + + +S+ N KW +++ V IVLV K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAALRKKPVHKRTCQY 632
+DK VT +EG+K K+++ H+ E SA N+ +F + + + V ++ Q
Sbjct: 129 --ADKRQVTQEEGEKKAKELKIMHM-ETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQM 185
Query: 633 L 635
+
Sbjct: 186 I 186
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 78.6 bits (185), Expect = 9e-16
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 281
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKID---- 449
++ + P+ L + + SR S N + +WY + + F+ + +L+ TK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMT 129
Query: 450 LRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
D+ +T Q ++ K ++A+ LV CS IN+ ++F+
Sbjct: 130 FPREDQEEITKQ-ARRYAKAMKAS-LVFCSTSHSINVQKIFK 169
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 78.6 bits (185), Expect = 9e-16
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 461
+ + Y + ++ Y V + S+ N V +W E+ ++ V +LV K D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRYAVEGVNRLLVGNKSDM--V 126
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
DK VV K+ + L E SA + N+++ F
Sbjct: 127 DKKVVEYSVAKEFADSLNIPFL-ETSAKDSTNVEQAF 162
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 71.3 bits (167), Expect = 1e-13
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Frame = +3
Query: 66 SDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVD-G 239
S+ A + + T + K+ ++GD VGK+ L+ + +++F + T+ ++ + +D
Sbjct: 3 SNTAPKNVVTINQ-KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSAS 416
V++ +WDTAGQE Y+ L P+ Y NC +V Y + +S E W EL +
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEG 120
Query: 417 VPIVLVATKIDLRSSDKAV 473
+ I L K+DL +AV
Sbjct: 121 IVIALAGNKLDLAQERRAV 139
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.5 bits (150), Expect = 2e-11
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 269
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKI 446
AGQE + + Y ++ Y V ++ S+E + W +++ + S + +VL +K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIRAMAPSTICVVLAGSKS 128
Query: 447 DLRSSDKAVVTTQEGKKL--KKKIRAAHLVECSALERINMDEVFEEAVRAALRK 602
DL++ + V+T+E + +K I +AH E S+ N++E F V + +
Sbjct: 129 DLQNQRQ--VSTEEAAEFCSEKHISSAH--ETSSYTGSNVEECFLSVVSTIITR 178
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 52.4 bits (120), Expect = 7e-08
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-EDVEMALWDTAG 275
K +++ + GD VGK+ L+ + + +P VF D +DV + L DT
Sbjct: 2 KEVRVVICGDQGVGKSSLISALIQEDNVTS-IPKVFPIISIPSNPDSNDDVSLVLVDT-- 58
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI-DL 452
Q D L+ ++C SYE V W P + +VPIVL K DL
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDL 118
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAH-LVECSALERINMDEVF 572
+ E L + + + CSALE+IN++E+F
Sbjct: 119 DNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELF 159
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD GQ
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.034
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ K ++I ++G GKT +LY N+ +PTV N TV ++++ +WD
Sbjct: 18 SNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVE---TVTYKNIKFNVWDVG 73
Query: 273 GQEDYERLRPL 305
GQ +++RPL
Sbjct: 74 GQ---DKIRPL 81
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -3
Query: 702 VKFFHFYVTNNKIFNRVAF----FF--IKDIGRCVCGLVSCGGPRAPLPRILRPCLSALV 541
+ F H V FN F FF I + RC+ C P+ PLP LR L
Sbjct: 359 LNFSHKSVMGRSTFNMPNFPEPKFFEDIPNTERCILSAFICSPPQLPLPNPLRMYLPCPS 418
Query: 540 LN 535
LN
Sbjct: 419 LN 420
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 IIFKCLYNRVLKR-----EFCGDIGLSDVAARTMGTTKRLKITVVGDGMVGKTCLLY 158
I+ K Y +L+R +FC D+GL MG ++ G+TC+++
Sbjct: 46 IVAKYTYTELLRRVNTIAKFCDDLGLGKTVGIHMGHELDFLCSIFALWATGRTCVIF 102
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 145 VLPTIPSPTTVIFNLFVVPMVRAATSDKPISPQNS 41
V P +P ++ L VV M + +T+D I P+N+
Sbjct: 113 VSPAVPITFAYLYALAVVSMFKCSTADPGILPRNA 147
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 169 LVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATSDKPISP 50
L + ++ VLPT T V++NL + ++ A PI+P
Sbjct: 206 LATSKARSVLPTSYGRTDVVYNLQRLALLTTALGQTPINP 245
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.2
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 280 SCPAVSHNAISTSSPSTVMWPT*-LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFN 104
S P S +++ SS S + + LS+++ T +S + TYS V+P+ + + +
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS--LSTYSSSVIPSSSTLVSSSSS 683
Query: 103 LFVVPMVRAATSDKPISPQNSRFKT 29
L V A++S PI +S T
Sbjct: 684 LIVSSSPVASSSSSPIPSSSSLVST 708
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -2
Query: 268 VSHNAISTSSPSTVMWP-T*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVV 92
VS +ST P + ++P T ++ T G ++F T S Q P+ T V + +
Sbjct: 1411 VSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYEPS----TVVTTSYYTT 1466
Query: 91 PMVRAATSDKPIS 53
+ +A + + +S
Sbjct: 1467 SVYTSAPATETVS 1479
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 322 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYS 152
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 TVIFNLFVVPMVRAATSDKPISPQNSRFKTLLYKH 14
T I N+F+ P+V+A T + ++ + +L KH
Sbjct: 1340 TSIVNVFITPLVKARTFPESLTTYHLDLLLVLSKH 1374
>SPAC29B12.04 |snz1||pyridoxine biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 507 KIRAAHLVECSALERINMDEVFEEAV 584
K+R H VE LE I +D + E V
Sbjct: 83 KVRIGHFVEAQILESIGVDYIDESEV 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,137,212
Number of Sequences: 5004
Number of extensions: 67116
Number of successful extensions: 222
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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