Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30756
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   199   7e-53
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   124   3e-30
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            73   1e-14
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   7.8  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   7.8  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   7.8  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   7.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.8  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  199 bits (486), Expect = 7e-53
 Identities = 96/183 (52%), Positives = 122/183 (66%), Gaps = 10/183 (5%)
 Frame = +3

Query: 87  MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
           M + + +K  VVGDG VGKTC+L  YT + FP EYVPT FDNY   + VDG  V + LWD
Sbjct: 1   MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWD 60

Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
           TAGQEDY+RLRPLSY QT+ FL+CYSV S SS+ENV  KWYPE+KH     PI+LV TKI
Sbjct: 61  TAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKI 120

Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 596
           DLR   + +          +  ++G+KL  KIRA   +ECSAL +  + +VF+EA+ A  
Sbjct: 121 DLREDRETISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEALCATE 180

Query: 597 RKK 605
            K+
Sbjct: 181 EKE 183


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  124 bits (299), Expect = 3e-30
 Identities = 63/134 (47%), Positives = 87/134 (64%), Gaps = 11/134 (8%)
 Frame = +3

Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
           +AGQEDY+RLRPLSY QT+ FLVC+SV S SS+ENV  KW PE+ H     P +LV T+I
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVRAAL 596
           DLR  +  +          +T ++G+KL K+++A   VECSAL +  +  VF+ A+ AAL
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAAL 120

Query: 597 R-KKPVHKRTCQYL 635
              +P  KR C++L
Sbjct: 121 EPPEPTKKRKCRFL 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 72.5 bits (170), Expect = 1e-14
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
 Frame = +3

Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQ 278
           + K+ ++G+  VGK+ L+  + + +F E    T+   ++   + +D   V+  +WDTAGQ
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLR 455
           E Y  L P+ Y      +V Y + +  S+      W  EL +  S ++ I L   K DL 
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQRQASPNIVIALAGNKADLA 142

Query: 456 SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
           +S   VV  +E K+     R    +E SA   +N++++F
Sbjct: 143 NS--RVVDYEEAKQYADDNRLL-FMETSAKTAVNVNDIF 178


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 567 VFEEAVRAALRKKPVHKRTCQY 632
           +F   VR   RK+PVHK  C Y
Sbjct: 61  IFRIRVRCGGRKRPVHK-GCTY 81


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 744 VVCPVCSKAIPILRVKFF 691
           +VC  C KA+ I   KFF
Sbjct: 436 IVCQQCQKAMTISGAKFF 453


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 744 VVCPVCSKAIPILRVKFF 691
           +VC  C KA+ I   KFF
Sbjct: 289 IVCQQCQKAMTISGAKFF 306


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 744 VVCPVCSKAIPILRVKFF 691
           +VC  C KA+ I   KFF
Sbjct: 436 IVCQQCQKAMTISGAKFF 453


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 113 NCCWRWYGWQDLLAICI 163
           +CCW W  +Q+ +A  +
Sbjct: 789 DCCWVWLKFQEWVAFIV 805


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 633 DIGRCVCGLVSC 598
           D GRCVCG   C
Sbjct: 607 DHGRCVCGQCEC 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,887
Number of Sequences: 2352
Number of extensions: 17086
Number of successful extensions: 254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)