Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30755
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-P...    29   2.7  
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    28   6.3  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    28   6.3  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    28   6.3  

>AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-PC,
           isoform C protein.
          Length = 1280

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 167 NFAHATLLNFLLVVGPLVSPHG*VPPPCP 253
           NFA   L  +    GPL+SPH    PP P
Sbjct: 16  NFAMCLLYGYYQPAGPLISPHVIAAPPPP 44


>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 299  CPTLQTETHFCFTTDMGRVVVPTRA 225
            C  ++    FCF +  GR+  PTRA
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRA 1443


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 299  CPTLQTETHFCFTTDMGRVVVPTRA 225
            C  ++    FCF +  GR+  PTRA
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRA 1292


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 299  CPTLQTETHFCFTTDMGRVVVPTRA 225
            C  ++    FCF +  GR+  PTRA
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRA 1443


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,577,444
Number of Sequences: 53049
Number of extensions: 444357
Number of successful extensions: 921
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)