Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30755
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr...    30   0.84 
AL033508-1|CAA22058.2|  821|Caenorhabditis elegans Hypothetical ...    28   4.5  

>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
           protein ZK455.2 protein.
          Length = 1118

 Score = 30.3 bits (65), Expect = 0.84
 Identities = 23/59 (38%), Positives = 27/59 (45%)
 Frame = +2

Query: 41  EHTAHPMVIGYRRPWTSAMPGAEPSLVSTRTVTGVKTHYATLNFAHATLLNFLLVVGPL 217
           EH AH  +  Y   W S   G  P  V     TG +  Y    F  A+LL F+L VGPL
Sbjct: 454 EHVAHETIQYY---WPSDS-GKLPPAVPKCGFTGAECDYRPY-FIGASLLAFILTVGPL 507


>AL033508-1|CAA22058.2|  821|Caenorhabditis elegans Hypothetical
           protein Y106G6G.2 protein.
          Length = 821

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 324 LELTYISRWVTHLHCRCLWVSLLVEPFVAND 416
           L +T I  W + L C+C  V+LLVE   +N+
Sbjct: 96  LAMTGIDEWKSQLQCKC--VTLLVEMVCSNE 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,377,184
Number of Sequences: 27780
Number of extensions: 219276
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)