Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30753
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.3  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    20   5.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    20   5.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    20   5.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 135 LSKKKVPPATAKAN 94
           +SKKK+ PAT K +
Sbjct: 269 ISKKKLSPATPKGS 282


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 176 NKGKLWKDIKHKYE 217
           NK +LW  + +KY+
Sbjct: 97  NKPELWDSLANKYD 110


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 176 NKGKLWKDIKHKYE 217
           NK +LW  + +KY+
Sbjct: 97  NKPELWDSLANKYD 110


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 176 NKGKLWKDIKHKYE 217
           NK +LW  + +KY+
Sbjct: 97  NKPELWDSLANKYD 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,092
Number of Sequences: 438
Number of extensions: 1260
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)