Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30748
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 155 2e-38
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 108 3e-24
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 42 3e-04
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 38 0.007
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 31 0.84
U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 1.9
Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 5.9
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 27 7.8
U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical pr... 27 7.8
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 155 bits (376), Expect = 2e-38
Identities = 71/154 (46%), Positives = 103/154 (66%)
Frame = -1
Query: 560 KLQEYKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELIC 381
++Q+ D++++ L++ S T EQK GV RL++ LG+V LYL+FG A+L+C
Sbjct: 6 QVQKVLDDVDKQLHEPSTV-TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVC 64
Query: 380 NSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 201
N +GFVYPAYMS+KA+ES K+DDT+WLTYWV++A S+VE+FS IV FP+YWL K I
Sbjct: 65 NFMGFVYPAYMSIKAIESSNKEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSI 124
Query: 200 FVIWCYLPTEYNGSLVXXXXXXXXXX*KHHGRID 99
F+++ YLP+ + G+ +H G ID
Sbjct: 125 FLLYLYLPS-FLGAAKLYHRFVKPVAARHSGSID 157
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 116 bits (279), Expect = 1e-26
Identities = 48/109 (44%), Positives = 72/109 (66%)
Frame = -1
Query: 479 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 300
E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 299 LTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLV 153
L YW V+ FSI+++F+ I+ +FP+YW+ K F+++ YLP E +GS V
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHV 156
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 108 bits (259), Expect = 3e-24
Identities = 48/100 (48%), Positives = 67/100 (67%)
Frame = -1
Query: 452 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYAC 273
Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140
Query: 272 FSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLV 153
+V++FS+ I+ WFP Y++ K F+++ YLP + GS++
Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVM 179
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = -1
Query: 395 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVG-WFPLY 219
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A +S +E D ++ WFP Y
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65
Query: 218 WLLKCIFVIWCYLPTEYNGSLVXXXXXXXXXX*KHHGRIDDMANTGKQD*NAVLMQ--SK 45
+ LK +F+ W P G+ + +H ID + + K + LM+ SK
Sbjct: 66 FQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDIDALLESAKSESYNQLMRIGSK 124
Query: 44 KII 36
++
Sbjct: 125 SLV 127
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -1
Query: 449 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 276
IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 275 CFSIVEYF 252
++++ F
Sbjct: 134 ILAVIDQF 141
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = -1
Query: 569 MASKLQEYKDNIEQSLNDKSKP-WT-KYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFG 396
MA+ + + + I + L ++K W K F AE+ G+ R I +Y++ G
Sbjct: 1 MATIIAKIESKINEYLKARNKEDWKEKTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGNF 60
Query: 395 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 255
L + I +P S L QK+ L YW++YA S+ +Y
Sbjct: 61 LPLFSHIICIFWPVKESFMILRQ-QKNPSDNILLYWILYAMVSLFDY 106
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 37.5 bits (83), Expect = 0.007
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = -1
Query: 479 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 306
E VG L I L LYL+ G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 305 KWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 204
L YW +Y ++++ F+ G Y L KC
Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 30.7 bits (66), Expect = 0.84
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Frame = -1
Query: 491 FELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 312
F E+ G R + F G + ++ I + + P +M++ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 311 DTKWLT--------YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 186
+ +L YW VYA F E F ++ W L + IF+ C
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195
>U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical
protein T10E9.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 293 YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 177
YW ++ F Y D I+ + PLY+++K I +LP
Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 261 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPRDLLPYHSSLLL--EASWSYR*YGQ 88
GV F FHRR S+V ++ + + +L + L+PY + + ASW YR G+
Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238
Query: 87 HRE 79
+E
Sbjct: 239 EKE 241
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 290 WVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 183
++ AC +S GW +YWLL C+ + +W Y
Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical
protein F36G9.8 protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 433 TKPKKMYNLFTPTFCSASSKYFVHGLLLSFRLCSMLSLYSCNLDAIVRSFSG*P 594
T P ++ ++ FC LL F++CSM S + N+ + FS P
Sbjct: 21 TTPVNIFGVYVILFCQTKQLASYRWHLLVFQVCSMTSDFLLNIGMLPVIFSPFP 74
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 328 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPK 444
DS DMYA LH + P P+ KY P N++ P+
Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 370 PIELHINSAPK-PNTKYKPVNATKPKKMYNLF-TPTFCSASS 489
P + +N+ P PNTK P N T ++ LF P+ CS S
Sbjct: 516 PAMMAVNTPPATPNTKEAPTNCTSLLQVPRLFDCPSPCSVPS 557
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 401 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 255
F L+ SIGFV+ Y SM L Q D + L + V+ + +V +
Sbjct: 179 FPLRLLITSIGFVWSTYASMGFLAGCQ-PDKKRLLVIYPVFLFYFVVSW 226
>U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical
protein C34G6.5 protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 437 SLRKCTICSRRPFVRLVQNISSMACFCRSDF 529
S + CTIC +R F N S CFCR ++
Sbjct: 323 SRQPCTICQKRSF-----NNSMGVCFCRKNY 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,554,754
Number of Sequences: 27780
Number of extensions: 320249
Number of successful extensions: 1067
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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