Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30747
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   0.57 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   0.57 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   0.57 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.3  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 392 FPVLSTRIISIAFNVLMTKAVTFMSTNLRIRSREFSNETAALFTTTSI 249
           FP+LST II I+   L+   V  ++ +  +      + TA L   T I
Sbjct: 122 FPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMI 169


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 392 FPVLSTRIISIAFNVLMTKAVTFMSTNLRIRSREFSNETAALFTTTSI 249
           FP+LST II I+   L+   V  ++ +  +      + TA L   T I
Sbjct: 122 FPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMI 169


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 392 FPVLSTRIISIAFNVLMTKAVTFMSTNLRIRSREFSNETAALFTTTSI 249
           FP+LST II I+   L+   V  ++ +  +      + TA L   T I
Sbjct: 122 FPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMI 169


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 68  LLKIRPSMLPSWTSTQFPDSNWKN 139
           L K  P ++  W+  +    NWKN
Sbjct: 281 LAKSWPQLIEKWSRVEMALDNWKN 304


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 38  MASVRLVLKYLLKIRPSMLPSWTSTQFPDSNWKN 139
           +A+ RL+  +   I+P  + S   TQF  + W+N
Sbjct: 242 IAAKRLIEDFSGYIKPKCVLSDHGTQFISNTWQN 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,759
Number of Sequences: 336
Number of extensions: 3264
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)