Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30747
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 63 4e-11
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 53 4e-08
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 52 6e-08
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 52 1e-07
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 48 1e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 2e-06
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 44 2e-05
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 44 2e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 43 5e-05
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 37 0.003
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 33 0.050
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 30 0.27
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.27
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 29 0.61
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 28 1.1
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 28 1.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.5
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 3.3
SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces... 26 5.7
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 25 7.6
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 7.6
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 25 7.6
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 25 7.6
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 25 10.0
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 62.9 bits (146), Expect = 4e-11
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Frame = +1
Query: 1 VNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFK-LEKHLNTKYGDGKVKF 177
++ K +++TG ++GIG S I AK IL S + + K L +KY + V
Sbjct: 4 LDGKTILITGASSGIGK-STAFEIAKVAKVKLILAARRFSTVEEIAKELESKY-EVSVLP 61
Query: 178 YKCDVSIDDQLFGAFNKALDSHGYIDVVVNNAAVSLENSLERIRRLVDINVT-ALVMSTL 354
K DVS + G IDV++NNA ++L +++D+N+ A+ M T
Sbjct: 62 LKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTD-----KVIDLNIDDAVTMITT 116
Query: 355 KAIEIMRVDK-------TGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQ 513
+ +M + + + G I+N+ SIA + + VYC TKSA+ QF++ + K+
Sbjct: 117 NVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGS-VYCSTKSALAQFTSALRKE 175
Query: 514 EYFSKTGVRVITVCYGPTDTD 576
T +R++ V G +T+
Sbjct: 176 TI--DTRIRIMEVDPGLVETE 194
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 52.8 bits (121), Expect = 4e-08
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +1
Query: 1 VNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFY 180
V ++V++TG A GIG ++F E + + ID + K++ D +
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDR---VAGIDIVDPSKVQ--------DAALAL- 50
Query: 181 KCDVSIDDQLFGAFNKALDSHGYIDVVVNNAAVSLENSLERI-RRLVDINVTALVMST-- 351
+ DVS DQ+ A K + + G IDV++NNA ++ + E++ D +V+ ++
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYL 110
Query: 352 LKAIEIMRVDKTGKGGTIINISSI 423
+ I + K GKGG+I+NI S+
Sbjct: 111 TQRYVIPHMAKQGKGGSIVNIGSV 134
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 52.4 bits (120), Expect = 6e-08
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Frame = +1
Query: 7 DKIVIVTGGANGIGAFSVEVFIENQAKHVAIL-----DIDTISGFKLEKHLNTKYGDGKV 171
+K++++TG + GIG + E ++ +AK +A+ +++T+ + ++ K GD
Sbjct: 6 EKVILLTGSSKGIGLATAEA-LQKKAKVIAVSRSLTPELETLLIQNPDSFVHVK-GD-VT 62
Query: 172 KFYKCDVSIDDQLFGAFNKALDSHGYIDVVVNNAAVSLENSLERIRRLVDINVTALVMST 351
+ K + + FG + + + G ++ + A + + R+L DIN ++V +
Sbjct: 63 EVGKASIETAIKKFGKLDSVILNAGVLEPIAKIA----DADINEWRKLFDINFFSVVETV 118
Query: 352 LKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKT 531
AI +R K GTI+ +SS AA++ F P+ YC +K+A+ +G +E
Sbjct: 119 KYAIPHLRKTK----GTIVIVSSGAAVRVF-PAWAAYCCSKAAINMLVMNLGSEE----P 169
Query: 532 GVRVITVCYGPTDTDLVPLMINIDDSINPE 621
+ + V G DT P+ ++I + N E
Sbjct: 170 DIMSVAVRPGVVDT---PMQVSIRNDSNKE 196
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 51.6 bits (118), Expect = 1e-07
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Frame = +1
Query: 16 VIVTGGANGIGAFSVEVFIENQAKHVAILDI-DTISGFKLEKHLNTKYGDGKVKFYKCDV 192
V++TG + G+G V+V + +A DTI+ +H K+ K DV
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTIT----IEH-------SKLLKLKLDV 56
Query: 193 SIDDQLFGAFNKALDSHGYIDVVVNNAAVSL-----ENSLERIRRLVDINVTALVMSTLK 357
+ + AF A G +D+V+NNA L ++E + R +++N + T +
Sbjct: 57 TDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKE 116
Query: 358 AIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQ 513
A+ +MR ++GKGG I+ ISS+A P + +Y +K AV S I ++
Sbjct: 117 ALNLMR--ESGKGGRILQISSVAGYYP-SPCLSMYNASKFAVEGLSQTIMRE 165
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 48.0 bits (109), Expect = 1e-06
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Frame = +1
Query: 10 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFYKCD 189
K ++TGG+ GIG FS+ +V +L + L K+G + K Y C
Sbjct: 10 KTTLITGGSGGIG-FSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHG-VQAKAYSCP 67
Query: 190 VSIDDQLFGAFNKALDS-HGYIDVVVNNAAV-----SLENSLERI-RRLVDINVTALVMS 348
+ + N+A++ G +DV++ NA + SLE+ E I ++V IN+ +
Sbjct: 68 IENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYT 127
Query: 349 TLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSK 528
A + K GKG I S + + Y TK+AV + + +
Sbjct: 128 AQAAGHHFK--KQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVE---WA 182
Query: 529 TGVRVITVCYGPTDTDL 579
RV +V G DTDL
Sbjct: 183 PFARVNSVSPGYIDTDL 199
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 47.2 bits (107), Expect = 2e-06
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Frame = +1
Query: 7 DKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFYKC 186
+K ++TGG +GIG + +F + V + ++ + L + G ++
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRN-CWIWEG 100
Query: 187 DVSIDDQLFGAFNKALDSHGYIDVVVNNAAV-SLENSLERI-RRLVDINVTALVMSTLKA 360
+ D + AL G+IDV+VNN A + S+E I D+ + S
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWV 160
Query: 361 IEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVR 540
+ + G +I+N SSI A P + Y TK A+ F+ + Q +++ G+R
Sbjct: 161 TK-AAISHMKSGSSIVNCSSINAYVG-RPDLLDYTSTKGAITAFTRGLSNQ--YAQHGIR 216
Query: 541 VITVCYGPTDTDLV 582
V V GP T LV
Sbjct: 217 VNAVAPGPIYTPLV 230
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 44.0 bits (99), Expect = 2e-05
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = +1
Query: 187 DVSIDDQLFGAFNKALDSHGYIDVVVNNAAVSLENSL-----ERIRRLVDINVTALVMST 351
DV+ + + KA+ G IDV++NNA S+ + L E+I + + NV +
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG-ALEV 80
Query: 352 LKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKT 531
+KA I + ++ G IIN+SSI F P +Y GTK A+ S + +
Sbjct: 81 IKA--ITPIFRSQHNGMIINVSSIGGKMTF-PLGCLYYGTKYAIEGISEALTWE--MQSI 135
Query: 532 GVRVITVCYGPTDTD 576
GV+V + G T T+
Sbjct: 136 GVKVKIIEPGFTATE 150
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 44.0 bits (99), Expect = 2e-05
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = +1
Query: 187 DVSIDDQLFGAFNKALDSHGYIDVVVNNAAVSLENSL-----ERIRRLVDINVTALVMST 351
DV+ + + KA+ G IDV++NNA S+ + L E+I + + NV +
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG-ALEV 80
Query: 352 LKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKT 531
+KA I + ++ G IIN+SSI F P +Y GTK A+ S + +
Sbjct: 81 IKA--ITPIFRSQHNGMIINVSSIGGKMTF-PLGCLYYGTKYAIEGISEALTWE--MQSI 135
Query: 532 GVRVITVCYGPTDTD 576
GV+V + G T T+
Sbjct: 136 GVKVKIIEPGFTATE 150
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 42.7 bits (96), Expect = 5e-05
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 7/167 (4%)
Frame = +1
Query: 10 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFY--K 183
K +V GGA GIG VF E A A + +T G K K + G VK Y K
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEAGAN--AFIVYNTTPGEKAAKEIAQANG---VKTYTCK 76
Query: 184 CDVSIDDQLFGAFNKALDSHGYIDVVVNNAAV-----SLENSLERIRRLVDINVTALVMS 348
CDV+I ++ AF + ID+VV N + +++ + E +++N+ +
Sbjct: 77 CDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNV 136
Query: 349 TLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQ 489
A I + K G G + S + Y +K+ V+Q
Sbjct: 137 AHNAGPIFQ--KQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQ 181
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.003
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Frame = +1
Query: 16 VIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFYKCDVS 195
V++TGG++G+G +++ +Q H I + F L++ L + K + ++
Sbjct: 4 VLITGGSSGLGKRIAQIW--SQKGHQC--HIVGRNEFHLKETLQSL---SVAKGQQHTLT 56
Query: 196 IDDQLFGAFN-KALDSHGYIDVVVNNAAVSLENSL------ERIRRLVDIN-VTALVMST 351
I D N K++ ID VV+ A V L++SL + I ++ N V+A+ +S
Sbjct: 57 IADVQSDMKNLKSIFESVEIDTVVHAAGV-LQSSLCVRTSEKEIDSIICTNLVSAIKLSK 115
Query: 352 LKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKT 531
+ +E R + + I+NISS + P VY +K+ + F+ + E SK
Sbjct: 116 MAILEWFRNKNSERDRLILNISSRLSTYAL-PGTSVYAASKAGLESFTKVLA-AEVASK- 172
Query: 532 GVRVITVCYGPTDTDLVPLMI 594
G+RV + G DT ++ I
Sbjct: 173 GIRVNAISPGYVDTPMLSSQI 193
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 32.7 bits (71), Expect = 0.050
Identities = 20/90 (22%), Positives = 42/90 (46%)
Frame = +1
Query: 10 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTKYGDGKVKFYKCD 189
K+ +VTG + GIG + AK V + + K+ K ++ + K++F + D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 190 VSIDDQLFGAFNKALDSHGYIDVVVNNAAV 279
+ + ++ A + + ++VNNA +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.27
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +1
Query: 259 VVNNAAVSLENSLERIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTIINISSIAAL-- 432
VV + A + N I V+++ TA ++ + + + T G + N + + +
Sbjct: 73 VVIHTASPVHNLARDIYFEVNVDGTANIIKACQKFNVDALVYTSSAGVVFNGADLINVDE 132
Query: 433 KQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDLVPLMINI 600
Q P V + +S L + KT + +GP D LVP M+++
Sbjct: 133 SQPIPEVHMDAYNESKALAEKQVLEASSESLKTAALRVAGLFGPGDRQLVPGMLSV 188
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.27
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 367 IMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVI 546
I +D + GT+ S+ +K + + VY G+ + +C+ Q+ F TG
Sbjct: 335 ITSLDFSHPFGTLATASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQDSFIATGSMDT 394
Query: 547 TVCYGPTDTDLVPLMINIDDSINPEIRSNID-AQKLQTAESA 669
TV D D++ +++S+N +D A + T+ +A
Sbjct: 395 TVRLWNLDNDVLHKDNPVEESLNSPPDQPVDNATNVLTSHTA 436
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -2
Query: 126 ESGNCVDVQDGNM----LGLIFNKYFNTKRTDAISTARNNY 16
E+G +D DG + LGL+ NK + TKR + +T+ NY
Sbjct: 517 ENGIVMDDGDGTLPILALGLVCNKVWQTKRFNPANTSITNY 557
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 1 VNDKIVIVTGGANGIGAFSVEVFIENQAKHVAIL 102
+N +V+VTGG++GIG VE A+ V +L
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = +1
Query: 19 IVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKH 141
++ G G+G++ + + + + + I+D D +S L +H
Sbjct: 129 VIVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRH 169
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 10 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTI 117
K+++V GA GIG ++ + + K V I+D+DTI
Sbjct: 27 KVLLV--GAGGIGCELLKNLLMSGVKEVHIIDLDTI 60
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 373 RVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQ-FSNCIGKQEYFSKTGVRVIT 549
++DK +G I NISS+ + F S F + +L F + F VRV
Sbjct: 746 KIDKDDEGFAITNISSVHKMPSFVLSYFSDLAASNRILTGFDRVLQLLPSFYDIPVRVRN 805
Query: 550 VCY 558
V Y
Sbjct: 806 VQY 808
>SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 502 IGKQEYFSKTGVRVITVCY 558
+G E++ + VRVI VCY
Sbjct: 90 VGMNEFYYQVAVRVIEVCY 108
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 469 TKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDLVPLMINIDDSI 612
T+ Q N + K F +R I V +DT PL++++ D +
Sbjct: 97 TRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLLLDLPDIV 144
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -3
Query: 491 NCKTALFVPQ*TKTLGQNCLSAAIDEMFIIVPPFPVLSTRIISIAFNVLMTKAVTFMSTN 312
+C F+ G + +S ++ E+F I+ P L TR + N+L+ A + N
Sbjct: 786 SCNLDRFLDSKLDHSGWSLISKSLSEVFKIINVAPELRTRAANCLANILVDVASRLSNEN 845
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 40 GIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHL 144
G+G E+ N+A+ +A+ D + GF+ HL
Sbjct: 602 GVGPELSELKYTNRAEFIAVTDAQCLEGFRALCHL 636
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 528 NRRKSNNGVL-RSNRH*LSSVDDQY 599
NR+ +N L SN H +SS +DQY
Sbjct: 211 NRQTNNTSALSNSNAHIMSSFEDQY 235
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 220 FNKALDSHGYIDVVVNNAAVSLENSLER 303
FN L GYID V NN VSLE + R
Sbjct: 39 FNDFLILPGYIDFVPNN--VSLETRISR 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,696,321
Number of Sequences: 5004
Number of extensions: 53741
Number of successful extensions: 172
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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