Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30743
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.39 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.7  
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    24   3.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.9  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   6.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.4  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   6.4  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 161  LHAQHQPGVRHRHGPVVVARGPVHGLQGGPAGV 63
            LH     G  H HG   V  GP +     PAGV
Sbjct: 1314 LHHHLHHGHHHHHGGEGVPMGPANAAPSSPAGV 1346


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 154  ACRTGSRRCRASCPGPPSAPPTWRRGCSI 240
            A R   +R R S P PP+ PPT R    +
Sbjct: 1118 ANRAYRQRNRRSQPTPPAPPPTPREAARL 1146


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 196 GPPSAPPTWRRG 231
           GPPS  P WR G
Sbjct: 60  GPPSVCPVWRHG 71


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 168  ISALQSELSRTTKRAADLEERLLNRLSSPPSNP 266
            I   +++    ++RAA   +R L R   PPS P
Sbjct: 1040 IRRARNDRRNASRRAARARQRELQRAGRPPSPP 1072


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 175 RCRASCPGPPSAPPTWRRGC 234
           RCR     P   PP W++ C
Sbjct: 119 RCRVEYTTPSWEPPGWQKVC 138


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 63  PRTAPTRSRSHPRLRSPAASC 1
           P T PTR+ +  R RS +ASC
Sbjct: 77  PPTPPTRNGTIFRYRSNSASC 97


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -2

Query: 158 HAQHQPGVRHRHGPV----VVARGPVHGLQGGPAG 66
           H QHQP  +    P+    V A   +  + GG AG
Sbjct: 9   HQQHQPQQQSPRSPIVAAAVAAAAAIGAVSGGSAG 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,683
Number of Sequences: 2352
Number of extensions: 10060
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)