Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30740
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.64 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   6.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.0  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 165 WNPVSKSSRWPVDPSCQHRLWCRSLQPSL 79
           W+P S  S + ++   QHR WC S QP L
Sbjct: 219 WSPASIDS-FTLE---QHRSWCSSSQPVL 243


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = +3

Query: 420 SC-SDESCGSGDESP 461
           SC +D+SC S D+SP
Sbjct: 115 SCHADKSCASDDKSP 129


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 152 RRARAGQWIRRASTACGAVLFNHP 81
           +R  AG W    ++ACG     +P
Sbjct: 135 QRLSAGDWFTSRTSACGLFSVCYP 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,525
Number of Sequences: 336
Number of extensions: 3091
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)